RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 SURF4O15260 269 aa12.5□□□□□ -0.41
ATG4B-209ENST00000425239 SRSF4Q08170 494 aaKnown RBP12.5□□□□□ -0.41
ATG4B-209ENST00000425239 AQP6Q13520 282 aa12.5□□□□□ -0.41
ATG4B-209ENST00000425239 TRAM2Q15035 370 aa12.5□□□□□ -0.41
ATG4B-209ENST00000425239 KRTAP27-1Q3LI81 207 aa12.5□□□□□ -0.41
ATG4B-209ENST00000425239 ZNF404Q494X3 552 aa12.5□□□□□ -0.41
ATG4B-209ENST00000425239 ZBED5Q49AG3 693 aa12.5□□□□□ -0.41
ATG4B-209ENST00000425239 LRRC23Q53EV4 343 aaPredicted RBP12.5□□□□□ -0.41
ATG4B-209ENST00000425239 FAM201AQ5SY85 155 aa12.5□□□□□ -0.41
ATG4B-209ENST00000425239 OR2T2Q6IF00 324 aa12.5□□□□□ -0.41
ATG4B-209ENST00000425239 LRRN1Q6UXK5 716 aa12.5□□□□□ -0.41
ATG4B-209ENST00000425239 COLCA1Q6ZS62 124 aa12.5□□□□□ -0.41
ATG4B-209ENST00000425239 OR5AS1Q8N127 324 aa12.5□□□□□ -0.41
ATG4B-209ENST00000425239 MUC20Q8N307 709 aaPredicted RBP12.5□□□□□ -0.41
ATG4B-209ENST00000425239 OR2T12Q8NG77 320 aa12.5□□□□□ -0.41
ATG4B-209ENST00000425239 OR10AD1Q8NGE0 317 aa12.5□□□□□ -0.41
ATG4B-209ENST00000425239 OR1F12Q8NHA8 337 aa12.5□□□□□ -0.41
ATG4B-209ENST00000425239 ACOT11Q8WXI4 607 aaPredicted RBP12.5□□□□□ -0.41
ATG4B-209ENST00000425239 TMIGD2Q96BF3 282 aa12.5□□□□□ -0.41
ATG4B-209ENST00000425239 COG8Q96MW5 612 aa12.5□□□□□ -0.41
ATG4B-209ENST00000425239 TMEM120AQ9BXJ8 343 aa12.5□□□□□ -0.41
ATG4B-209ENST00000425239 NMNAT1Q9HAN9 279 aaPredicted RBP12.5□□□□□ -0.41
ATG4B-209ENST00000425239 NRIP3Q9NQ35 241 aa12.5□□□□□ -0.41
ATG4B-209ENST00000425239 CMTM6Q9NX76 183 aa12.5□□□□□ -0.41
ATG4B-209ENST00000425239 VSX1Q9NZR4 365 aaPredicted RBP12.5□□□□□ -0.41
ATG4B-209ENST00000425239 ASH2LQ9UBL3 628 aa12.5□□□□□ -0.41
ATG4B-209ENST00000425239 GRHPRQ9UBQ7 328 aa12.5□□□□□ -0.41
ATG4B-209ENST00000425239 OR5V1Q9UGF6 321 aa12.5□□□□□ -0.41
ATG4B-209ENST00000425239 COA3Q9Y2R0 106 aaPredicted RBP12.5□□□□□ -0.41
ATG4B-209ENST00000425239 LOC100653049A0A140TA62 436 aa12.49□□□□□ -0.41
ATG4B-209ENST00000425239 ELOVL7A1L3X0 281 aa12.49□□□□□ -0.41
ATG4B-209ENST00000425239 IFNL4K9M1U5 179 aa12.49□□□□□ -0.41
ATG4B-209ENST00000425239 RER1O15258 196 aa12.49□□□□□ -0.41
ATG4B-209ENST00000425239 KRT34O76011 436 aa12.49□□□□□ -0.41
ATG4B-209ENST00000425239 GPANK1O95872 356 aa12.49□□□□□ -0.41
ATG4B-209ENST00000425239 SELEP16581 610 aa12.49□□□□□ -0.41
ATG4B-209ENST00000425239 MTNR1AP48039 350 aa12.49□□□□□ -0.41
ATG4B-209ENST00000425239 RELBQ01201 579 aa12.49□□□□□ -0.41
ATG4B-209ENST00000425239 CGB2Q6NT52 195 aa12.49□□□□□ -0.41
ATG4B-209ENST00000425239 SLC27A4Q6P1M0 643 aa12.49□□□□□ -0.41
ATG4B-209ENST00000425239 C1orf94Q6P1W5 598 aa12.49□□□□□ -0.41
ATG4B-209ENST00000425239 LYPD2Q6UXB3 125 aa12.49□□□□□ -0.41
ATG4B-209ENST00000425239 PTCHD4Q6ZW05 846 aa12.49□□□□□ -0.41
ATG4B-209ENST00000425239 FITM2Q8N6M3 262 aa12.49□□□□□ -0.41
ATG4B-209ENST00000425239 OR13G1Q8NGZ3 307 aa12.49□□□□□ -0.41
ATG4B-209ENST00000425239 SLC7A13Q8TCU3 470 aa12.49□□□□□ -0.41
ATG4B-209ENST00000425239 RASD2Q96D21 266 aa12.49□□□□□ -0.41
ATG4B-209ENST00000425239 MIOXQ9UGB7 285 aa12.49□□□□□ -0.41
ATG4B-209ENST00000425239 ATPIF1Q9UII2 106 aa12.49□□□□□ -0.41
ATG4B-209ENST00000425239 SIGLEC7Q9Y286 467 aa12.49□□□□□ -0.41
ATG4B-209ENST00000425239 WNK1Q9H4A3 2382 aa12.49□□□□□ -0.41
ATG4B-209ENST00000425239 BBIP1A8MTZ0 92 aa12.48□□□□□ -0.41
ATG4B-209ENST00000425239 IQCF6A8MYZ5 107 aa12.48□□□□□ -0.41
ATG4B-209ENST00000425239 F5H5P2 479 aa12.48□□□□□ -0.41
ATG4B-209ENST00000425239 DCTN6O00399 190 aa12.48□□□□□ -0.41
ATG4B-209ENST00000425239 TNFRSF13BO14836 293 aaPredicted RBP12.48□□□□□ -0.41
ATG4B-209ENST00000425239 HOXA3O43365 443 aaPredicted RBP12.48□□□□□ -0.41
ATG4B-209ENST00000425239 OMGP23515 440 aa12.48□□□□□ -0.41
ATG4B-209ENST00000425239 PSMB10P40306 273 aa12.48□□□□□ -0.41
ATG4B-209ENST00000425239 GATA4P43694 442 aa12.48□□□□□ -0.41
ATG4B-209ENST00000425239 GPR4P46093 362 aa12.48□□□□□ -0.41
ATG4B-209ENST00000425239 MAB21L1Q13394 359 aa12.48□□□□□ -0.41
ATG4B-209ENST00000425239 DEFB112Q30KQ8 113 aa12.48□□□□□ -0.41
ATG4B-209ENST00000425239 CBLL1Q75N03 491 aa12.48□□□□□ -0.41
ATG4B-209ENST00000425239 GLB1L2Q8IW92 636 aa12.48□□□□□ -0.41
ATG4B-209ENST00000425239 SLC15A3Q8IY34 581 aa12.48□□□□□ -0.41
ATG4B-209ENST00000425239 ATG16L2Q8NAA4 619 aa12.48□□□□□ -0.41
ATG4B-209ENST00000425239 OR10S1Q8NGN2 331 aa12.48□□□□□ -0.41
ATG4B-209ENST00000425239 NEIL1Q96FI4 390 aaPredicted RBP12.48□□□□□ -0.41
ATG4B-209ENST00000425239 GPX7Q96SL4 187 aaPredicted RBP12.48□□□□□ -0.41
ATG4B-209ENST00000425239 FNDC11Q9BVV2 318 aa12.48□□□□□ -0.41
ATG4B-209ENST00000425239 CDADC1Q9BWV3 514 aa12.48□□□□□ -0.41
ATG4B-209ENST00000425239 NUAK2Q9H093 628 aa12.48□□□□□ -0.41
ATG4B-209ENST00000425239 SYT4Q9H2B2 425 aa12.48□□□□□ -0.41
ATG4B-209ENST00000425239 PTTG3PQ9NZH4 202 aa12.48□□□□□ -0.41
ATG4B-209ENST00000425239 PDP1Q9P0J1 537 aaPredicted RBP12.48□□□□□ -0.41
ATG4B-209ENST00000425239 LHFPL6Q9Y693 200 aa12.48□□□□□ -0.41
ATG4B-209ENST00000425239 TRAV40A0A0B4J280 105 aa12.47□□□□□ -0.41
ATG4B-209ENST00000425239 IGHV3-64DA0A0J9YX35 117 aa12.47□□□□□ -0.41
ATG4B-209ENST00000425239 FAM181BA6NEQ2 426 aa12.47□□□□□ -0.41
ATG4B-209ENST00000425239 HMGB1P1B2RPK0 211 aaPredicted RBP12.47□□□□□ -0.41
ATG4B-209ENST00000425239 SLC16A7O60669 478 aa12.47□□□□□ -0.41
ATG4B-209ENST00000425239 TXNDC12O95881 172 aa12.47□□□□□ -0.41
ATG4B-209ENST00000425239 IFNW1P05000 195 aa12.47□□□□□ -0.41
ATG4B-209ENST00000425239 RPS2P15880 293 aaKnown RBP12.47□□□□□ -0.41
ATG4B-209ENST00000425239 SDHAP31040 664 aa12.47□□□□□ -0.41
ATG4B-209ENST00000425239 RPL4P36578 427 aaKnown RBP12.47□□□□□ -0.41
ATG4B-209ENST00000425239 CDKN2AP42771 156 aaKnown RBP12.47□□□□□ -0.41
ATG4B-209ENST00000425239 KRTAP10-3P60369 221 aa12.47□□□□□ -0.41
ATG4B-209ENST00000425239 GNB2P62879 340 aa12.47□□□□□ -0.41
ATG4B-209ENST00000425239 HOXA4Q00056 320 aaPredicted RBP12.47□□□□□ -0.41
ATG4B-209ENST00000425239 DBPQ10586 325 aaPredicted RBP12.47□□□□□ -0.41
ATG4B-209ENST00000425239 WDR25Q64LD2 544 aaPredicted RBP12.47□□□□□ -0.41
ATG4B-209ENST00000425239 C8orf82Q6P1X6 216 aaPredicted RBP12.47□□□□□ -0.41
ATG4B-209ENST00000425239 BRD3OSQ6XYD6 125 aa12.47□□□□□ -0.41
ATG4B-209ENST00000425239 RHOUQ7L0Q8 258 aa12.47□□□□□ -0.41
ATG4B-209ENST00000425239 MOGAT3Q86VF5 341 aa12.47□□□□□ -0.41
ATG4B-209ENST00000425239 ZNF570Q96NI8 536 aa12.47□□□□□ -0.41
ATG4B-209ENST00000425239 SRRM5B3KS81 715 aa12.46□□□□□ -0.41
ATG4B-209ENST00000425239 C22orf46C9J442 243 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms