RNA–Protein interactions for RNA: ENST00000424846.3

TPM3P9-201, Transcript of tropomyosin 3 pseudogene 9, humanhuman

TSL 1 (best) BASIC

Gene TPM3P9, Length 2,920 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P9-201ENST00000424846 CHST4Q8NCG5 386 aa12.68□□□□□ -0.38
TPM3P9-201ENST00000424846 OR52N4Q8NGI2 321 aa12.68□□□□□ -0.38
TPM3P9-201ENST00000424846 TMEM106CQ9BVX2 250 aa12.68□□□□□ -0.38
TPM3P9-201ENST00000424846 DZANK1Q9NVP4 752 aa12.68□□□□□ -0.38
TPM3P9-201ENST00000424846 VSX1Q9NZR4 365 aaPredicted RBP12.68□□□□□ -0.38
TPM3P9-201ENST00000424846 MBD2Q9UBB5 411 aa12.68□□□□□ -0.38
TPM3P9-201ENST00000424846 GPN3Q9UHW5 284 aaPredicted RBP12.68□□□□□ -0.38
TPM3P9-201ENST00000424846 PCDHB10Q9UN67 800 aa12.68□□□□□ -0.38
TPM3P9-201ENST00000424846 A0A0D9SG52 128 aa12.68□□□□□ -0.38
TPM3P9-201ENST00000424846 NPIPB7O75200 414 aa12.68□□□□□ -0.38
TPM3P9-201ENST00000424846 F12P00748 615 aaPredicted RBP12.68□□□□□ -0.38
TPM3P9-201ENST00000424846 GNB3P16520 340 aa12.68□□□□□ -0.38
TPM3P9-201ENST00000424846 ADCYAP1P18509 176 aa12.68□□□□□ -0.38
TPM3P9-201ENST00000424846 RORAP35398 523 aa12.68□□□□□ -0.38
TPM3P9-201ENST00000424846 CASRP41180 1078 aa12.68□□□□□ -0.38
TPM3P9-201ENST00000424846 CCINQ13939 588 aa12.68□□□□□ -0.38
TPM3P9-201ENST00000424846 GUCA2BQ16661 112 aa12.68□□□□□ -0.38
TPM3P9-201ENST00000424846 ZNF260Q3ZCT1 412 aa12.68□□□□□ -0.38
TPM3P9-201ENST00000424846 CLVS2Q5SYC1 327 aa12.68□□□□□ -0.38
TPM3P9-201ENST00000424846 ZNF584Q8IVC4 421 aa12.68□□□□□ -0.38
TPM3P9-201ENST00000424846 ASB17Q8WXJ9 295 aa12.68□□□□□ -0.38
TPM3P9-201ENST00000424846 FGGYQ96C11 551 aa12.68□□□□□ -0.38
TPM3P9-201ENST00000424846 TCTN2Q96GX1 697 aa12.68□□□□□ -0.38
TPM3P9-201ENST00000424846 SLC46A1Q96NT5 459 aa12.68□□□□□ -0.38
TPM3P9-201ENST00000424846 CENPMQ9NSP4 180 aa12.68□□□□□ -0.38
TPM3P9-201ENST00000424846 OR52A1Q9UKL2 312 aa12.68□□□□□ -0.38
TPM3P9-201ENST00000424846 C9orf170A2RU37 121 aa12.68□□□□□ -0.38
TPM3P9-201ENST00000424846 FRG2CA6NGY1 282 aa12.68□□□□□ -0.38
TPM3P9-201ENST00000424846 PRAMEF26H0Y7S4 382 aa12.68□□□□□ -0.38
TPM3P9-201ENST00000424846 PLPP3O14495 311 aa12.68□□□□□ -0.38
TPM3P9-201ENST00000424846 DXOO77932 396 aaKnown RBP12.68□□□□□ -0.38
TPM3P9-201ENST00000424846 GLULP15104 373 aa12.68□□□□□ -0.38
TPM3P9-201ENST00000424846 AKR1C4P17516 323 aa12.68□□□□□ -0.38
TPM3P9-201ENST00000424846 VAMP1P23763 118 aa12.68□□□□□ -0.38
TPM3P9-201ENST00000424846 IL12BP29460 328 aa12.68□□□□□ -0.38
TPM3P9-201ENST00000424846 HRH1P35367 487 aa12.68□□□□□ -0.38
TPM3P9-201ENST00000424846 CAPZBP47756 277 aa12.68□□□□□ -0.38
TPM3P9-201ENST00000424846 SSBP1Q04837 148 aaKnown RBP12.68□□□□□ -0.38
TPM3P9-201ENST00000424846 EBPQ15125 230 aaKnown RBP12.68□□□□□ -0.38
TPM3P9-201ENST00000424846 C1orf140Q5VVS0 124 aa12.68□□□□□ -0.38
TPM3P9-201ENST00000424846 ARL5BQ96KC2 179 aa12.68□□□□□ -0.38
TPM3P9-201ENST00000424846 SOX7Q9BT81 388 aa12.68□□□□□ -0.38
TPM3P9-201ENST00000424846 MED29Q9NX70 200 aa12.68□□□□□ -0.38
TPM3P9-201ENST00000424846 HHLA2Q9UM44 414 aa12.68□□□□□ -0.38
TPM3P9-201ENST00000424846 SULT1C2O00338 296 aa12.67□□□□□ -0.38
TPM3P9-201ENST00000424846 SNAPC5O75971 98 aa12.67□□□□□ -0.38
TPM3P9-201ENST00000424846 PRKACAP17612 351 aa12.67□□□□□ -0.38
TPM3P9-201ENST00000424846 EN2P19622 333 aaPredicted RBP12.67□□□□□ -0.38
TPM3P9-201ENST00000424846 SERTAD2Q14140 314 aa12.67□□□□□ -0.38
TPM3P9-201ENST00000424846 PDSS1Q5T2R2 415 aa12.67□□□□□ -0.38
TPM3P9-201ENST00000424846 KCTD18Q6PI47 426 aaPredicted RBP12.67□□□□□ -0.38
TPM3P9-201ENST00000424846 SHISA6Q6ZSJ9 500 aa12.67□□□□□ -0.38
TPM3P9-201ENST00000424846 CLRN3Q8NCR9 226 aa12.67□□□□□ -0.38
TPM3P9-201ENST00000424846 ST7LQ8TDW4 575 aa12.67□□□□□ -0.38
TPM3P9-201ENST00000424846 AQP3Q92482 292 aa12.67□□□□□ -0.38
TPM3P9-201ENST00000424846 NICN1Q9BSH3 213 aa12.67□□□□□ -0.38
TPM3P9-201ENST00000424846 ZNF416Q9BWM5 594 aa12.67□□□□□ -0.38
TPM3P9-201ENST00000424846 TBL1XR1Q9BZK7 514 aa12.67□□□□□ -0.38
TPM3P9-201ENST00000424846 NKX6-2Q9C056 277 aaPredicted RBP12.67□□□□□ -0.38
TPM3P9-201ENST00000424846 ASF1BQ9NVP2 202 aa12.67□□□□□ -0.38
TPM3P9-201ENST00000424846 R4GMQ9 66 aa12.67□□□□□ -0.38
TPM3P9-201ENST00000424846 TMEM269A0A1B0GVZ9 245 aa12.67□□□□□ -0.38
TPM3P9-201ENST00000424846 TTLL8A6PVC2 850 aa12.67□□□□□ -0.38
TPM3P9-201ENST00000424846 HSPB2A8KAH6 182 aa12.67□□□□□ -0.38
TPM3P9-201ENST00000424846 F5H0A9 414 aaPredicted RBP12.67□□□□□ -0.38
TPM3P9-201ENST00000424846 TSPAN2O60636 221 aa12.67□□□□□ -0.38
TPM3P9-201ENST00000424846 ZNF217O75362 1048 aa12.67□□□□□ -0.38
TPM3P9-201ENST00000424846 ERCC1P07992 297 aaPredicted RBP12.67□□□□□ -0.38
TPM3P9-201ENST00000424846 CD37P11049 281 aa12.67□□□□□ -0.38
TPM3P9-201ENST00000424846 GP1BBP13224 206 aa12.67□□□□□ -0.38
TPM3P9-201ENST00000424846 FSTP19883 344 aa12.67□□□□□ -0.38
TPM3P9-201ENST00000424846 ARRB1P49407 418 aaPredicted RBP12.67□□□□□ -0.38
TPM3P9-201ENST00000424846 SNTB1Q13884 538 aaKnown RBP12.67□□□□□ -0.38
TPM3P9-201ENST00000424846 HSPB2Q16082 182 aa12.67□□□□□ -0.38
TPM3P9-201ENST00000424846 RNASE10Q5GAN6 216 aaKnown RBP12.67□□□□□ -0.38
TPM3P9-201ENST00000424846 Q6ZS52 159 aa12.67□□□□□ -0.38
TPM3P9-201ENST00000424846 LYG2Q86SG7 212 aa12.67□□□□□ -0.38
TPM3P9-201ENST00000424846 SLC25A42Q86VD7 318 aa12.67□□□□□ -0.38
TPM3P9-201ENST00000424846 ADAT3Q96EY9 351 aaPredicted RBP12.67□□□□□ -0.38
TPM3P9-201ENST00000424846 ZNF285Q96NJ3 590 aa12.67□□□□□ -0.38
TPM3P9-201ENST00000424846 PELOQ9BRX2 385 aaKnown RBP12.67□□□□□ -0.38
TPM3P9-201ENST00000424846 OR6C76A6NM76 312 aa12.66□□□□□ -0.38
TPM3P9-201ENST00000424846 SHISA8B8ZZ34 492 aa12.66□□□□□ -0.38
TPM3P9-201ENST00000424846 AGTR1P30556 359 aa12.66□□□□□ -0.38
TPM3P9-201ENST00000424846 IL13RA1P78552 427 aa12.66□□□□□ -0.38
TPM3P9-201ENST00000424846 ACOT7LQ6ZUV0 252 aa12.66□□□□□ -0.38
TPM3P9-201ENST00000424846 PUSL1Q8N0Z8 303 aaKnown RBP12.66□□□□□ -0.38
TPM3P9-201ENST00000424846 SLC26A10Q8NG04 563 aa12.66□□□□□ -0.38
TPM3P9-201ENST00000424846 SAV1Q9H4B6 383 aaPredicted RBP12.66□□□□□ -0.38
TPM3P9-201ENST00000424846 SCPEP1Q9HB40 452 aa12.66□□□□□ -0.38
TPM3P9-201ENST00000424846 COMMD9Q9P000 198 aa12.66□□□□□ -0.38
TPM3P9-201ENST00000424846 CLEC1BQ9P126 229 aa12.66□□□□□ -0.38
TPM3P9-201ENST00000424846 KCNK7Q9Y2U2 307 aa12.66□□□□□ -0.38
TPM3P9-201ENST00000424846 VPS13AQ96RL7 3174 aa12.66□□□□□ -0.38
TPM3P9-201ENST00000424846 NDUFA2O43678 99 aa12.66□□□□□ -0.38
TPM3P9-201ENST00000424846 STK17BO94768 372 aa12.66□□□□□ -0.38
TPM3P9-201ENST00000424846 OR2F2O95006 317 aa12.66□□□□□ -0.38
TPM3P9-201ENST00000424846 ACTL6AO96019 429 aa12.66□□□□□ -0.38
TPM3P9-201ENST00000424846 PMP2P02689 132 aa12.66□□□□□ -0.38
TPM3P9-201ENST00000424846 SLC25A4P12235 298 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms