RNA–Protein interactions for RNA: ENST00000422869.6

CTCFL-204, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-204ENST00000422869 SKP2Q13309 424 aa11.39□□□□□ -0.59
CTCFL-204ENST00000422869 RBM39Q14498 530 aaKnown RBP11.39□□□□□ -0.59
CTCFL-204ENST00000422869 PDGFRLQ15198 375 aa11.39□□□□□ -0.59
CTCFL-204ENST00000422869 FNDC7Q5VTL7 733 aa11.39□□□□□ -0.59
CTCFL-204ENST00000422869 ETV3LQ6ZN32 361 aa11.39□□□□□ -0.59
CTCFL-204ENST00000422869 RD3Q7Z3Z2 195 aa11.39□□□□□ -0.59
CTCFL-204ENST00000422869 TMEM200AQ86VY9 491 aa11.39□□□□□ -0.59
CTCFL-204ENST00000422869 ZNF761Q86XN6 746 aaPredicted RBP11.39□□□□□ -0.59
CTCFL-204ENST00000422869 OR9A4Q8NGU2 314 aa11.39□□□□□ -0.59
CTCFL-204ENST00000422869 BAHD1Q8TBE0 780 aaPredicted RBP11.39□□□□□ -0.59
CTCFL-204ENST00000422869 C8orf44Q96CB5 159 aa11.39□□□□□ -0.59
CTCFL-204ENST00000422869 SMIM8Q96KF7 97 aa11.39□□□□□ -0.59
CTCFL-204ENST00000422869 DEFB118Q96PH6 123 aa11.39□□□□□ -0.59
CTCFL-204ENST00000422869 GDF2Q9UK05 429 aaPredicted RBP11.39□□□□□ -0.59
CTCFL-204ENST00000422869 PCDHGA1Q9Y5H4 931 aa11.39□□□□□ -0.59
CTCFL-204ENST00000422869 ARID1BQ8NFD5 2236 aaPredicted RBP11.38□□□□□ -0.59
CTCFL-204ENST00000422869 POM121BA6NF01 834 aa11.38□□□□□ -0.59
CTCFL-204ENST00000422869 NUDT21O43809 227 aaKnown RBP11.38□□□□□ -0.59
CTCFL-204ENST00000422869 ADH1BP00325 375 aa11.38□□□□□ -0.59
CTCFL-204ENST00000422869 PLGP00747 810 aaPredicted RBP11.38□□□□□ -0.59
CTCFL-204ENST00000422869 PAX6P26367 422 aa11.38□□□□□ -0.59
CTCFL-204ENST00000422869 ELAVL1Q15717 326 aaKnown RBP11.38□□□□□ -0.59
CTCFL-204ENST00000422869 RTL10Q7L3V2 364 aa11.38□□□□□ -0.59
CTCFL-204ENST00000422869 TAF8Q7Z7C8 310 aa11.38□□□□□ -0.59
CTCFL-204ENST00000422869 C16orf52Q8NHV5 167 aa11.38□□□□□ -0.59
CTCFL-204ENST00000422869 ADAMTS17Q8TE56 1095 aa11.38□□□□□ -0.59
CTCFL-204ENST00000422869 ASB17Q8WXJ9 295 aa11.38□□□□□ -0.59
CTCFL-204ENST00000422869 PTX4Q96A99 478 aa11.38□□□□□ -0.59
CTCFL-204ENST00000422869 DNAJA3Q96EY1 480 aa11.38□□□□□ -0.59
CTCFL-204ENST00000422869 SEC61A2Q9H9S3 476 aa11.38□□□□□ -0.59
CTCFL-204ENST00000422869 MRPS33Q9Y291 106 aaKnown RBP11.38□□□□□ -0.59
CTCFL-204ENST00000422869 FREM3P0C091 2139 aa11.38□□□□□ -0.59
CTCFL-204ENST00000422869 SLC31A1O15431 190 aa11.38□□□□□ -0.59
CTCFL-204ENST00000422869 LMX1BO60663 402 aa11.38□□□□□ -0.59
CTCFL-204ENST00000422869 APBB3O95704 486 aa11.38□□□□□ -0.59
CTCFL-204ENST00000422869 S100A8P05109 93 aa11.38□□□□□ -0.59
CTCFL-204ENST00000422869 SPARCP09486 303 aa11.38□□□□□ -0.59
CTCFL-204ENST00000422869 ZNF806P0C7X5 589 aa11.38□□□□□ -0.59
CTCFL-204ENST00000422869 ZNF44P15621 663 aa11.38□□□□□ -0.59
CTCFL-204ENST00000422869 ST6GAL1P15907 406 aa11.38□□□□□ -0.59
CTCFL-204ENST00000422869 PTAFRP25105 342 aa11.38□□□□□ -0.59
CTCFL-204ENST00000422869 ABCD3P28288 659 aa11.38□□□□□ -0.59
CTCFL-204ENST00000422869 GPR3P46089 330 aa11.38□□□□□ -0.59
CTCFL-204ENST00000422869 SLC6A9P48067 706 aa11.38□□□□□ -0.59
CTCFL-204ENST00000422869 C1orf100Q5SVJ3 147 aa11.38□□□□□ -0.59
CTCFL-204ENST00000422869 ZNF440Q8IYI8 595 aa11.38□□□□□ -0.59
CTCFL-204ENST00000422869 OR14C36Q8NHC7 312 aa11.38□□□□□ -0.59
CTCFL-204ENST00000422869 TINAGQ9UJW2 476 aa11.38□□□□□ -0.59
CTCFL-204ENST00000422869 CACNA1IQ9P0X4 2223 aa11.38□□□□□ -0.59
CTCFL-204ENST00000422869 A6NCN8 305 aa11.37□□□□□ -0.59
CTCFL-204ENST00000422869 C9JQL5 133 aa11.37□□□□□ -0.59
CTCFL-204ENST00000422869 EIF1BO60739 113 aaKnown RBP11.37□□□□□ -0.59
CTCFL-204ENST00000422869 EIF1P41567 113 aaKnown RBP11.37□□□□□ -0.59
CTCFL-204ENST00000422869 CX3CR1P49238 355 aa11.37□□□□□ -0.59
CTCFL-204ENST00000422869 F2RL1P55085 397 aa11.37□□□□□ -0.59
CTCFL-204ENST00000422869 SGCAQ16586 387 aa11.37□□□□□ -0.59
CTCFL-204ENST00000422869 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.37□□□□□ -0.59
CTCFL-204ENST00000422869 SLC18B1Q6NT16 456 aa11.37□□□□□ -0.59
CTCFL-204ENST00000422869 RTN4RL2Q86UN3 420 aa11.37□□□□□ -0.59
CTCFL-204ENST00000422869 NUBPLQ8TB37 319 aa11.37□□□□□ -0.59
CTCFL-204ENST00000422869 LAT2Q9GZY6 243 aa11.37□□□□□ -0.59
CTCFL-204ENST00000422869 OR5AC2Q9NZP5 309 aa11.37□□□□□ -0.59
CTCFL-204ENST00000422869 LRP12Q9Y561 859 aa11.37□□□□□ -0.59
CTCFL-204ENST00000422869 FAM157AC9JC47 383 aa11.37□□□□□ -0.59
CTCFL-204ENST00000422869 RNASEK-C17orf49H0YIS7 233 aa11.37□□□□□ -0.59
CTCFL-204ENST00000422869 ACTR1BP42025 376 aa11.37□□□□□ -0.59
CTCFL-204ENST00000422869 LPAR6P43657 344 aa11.37□□□□□ -0.59
CTCFL-204ENST00000422869 ACTR1AP61163 376 aa11.37□□□□□ -0.59
CTCFL-204ENST00000422869 HGFACQ04756 655 aa11.37□□□□□ -0.59
CTCFL-204ENST00000422869 SQSTM1Q13501 440 aa11.37□□□□□ -0.59
CTCFL-204ENST00000422869 ZNF585AQ6P3V2 769 aa11.37□□□□□ -0.59
CTCFL-204ENST00000422869 ZNF563Q8TA94 476 aa11.37□□□□□ -0.59
CTCFL-204ENST00000422869 MARCH1Q8TCQ1 289 aa11.37□□□□□ -0.59
CTCFL-204ENST00000422869 TCEAL3Q969E4 200 aa11.37□□□□□ -0.59
CTCFL-204ENST00000422869 TOX2Q96NM4 488 aa11.37□□□□□ -0.59
CTCFL-204ENST00000422869 CLCC1Q96S66 551 aa11.37□□□□□ -0.59
CTCFL-204ENST00000422869 SEBOXQ9HB31 216 aaPredicted RBP11.37□□□□□ -0.59
CTCFL-204ENST00000422869 SZT2Q5T011 3432 aa11.37□□□□□ -0.59
CTCFL-204ENST00000422869 CPAMD8Q8IZJ3 1885 aa11.37□□□□□ -0.59
CTCFL-204ENST00000422869 PRAMEF26H0Y7S4 382 aa11.37□□□□□ -0.59
CTCFL-204ENST00000422869 MBTPS2O43462 519 aa11.37□□□□□ -0.59
CTCFL-204ENST00000422869 SRSF10O75494 262 aaKnown RBP11.37□□□□□ -0.59
CTCFL-204ENST00000422869 CD5P06127 495 aa11.37□□□□□ -0.59
CTCFL-204ENST00000422869 RAB6AP20340 208 aa11.37□□□□□ -0.59
CTCFL-204ENST00000422869 UNC119Q13432 240 aa11.37□□□□□ -0.59
CTCFL-204ENST00000422869 CCINQ13939 588 aa11.37□□□□□ -0.59
CTCFL-204ENST00000422869 TSC22D1Q15714 1073 aa11.37□□□□□ -0.59
CTCFL-204ENST00000422869 C15orf54Q8N8G6 183 aa11.37□□□□□ -0.59
CTCFL-204ENST00000422869 OR13C3Q8NGS6 347 aa11.37□□□□□ -0.59
CTCFL-204ENST00000422869 TSACCQ96A04 125 aaPredicted RBP11.37□□□□□ -0.59
CTCFL-204ENST00000422869 FBXO17Q96EF6 278 aa11.37□□□□□ -0.59
CTCFL-204ENST00000422869 SAT2Q96F10 170 aaPredicted RBP11.37□□□□□ -0.59
CTCFL-204ENST00000422869 C14orf79Q96F83 325 aa11.37□□□□□ -0.59
CTCFL-204ENST00000422869 MICU1Q9BPX6 476 aa11.37□□□□□ -0.59
CTCFL-204ENST00000422869 A0A1W2PPE3 182 aa11.36□□□□□ -0.59
CTCFL-204ENST00000422869 C11orf98E9PRG8 122 aa11.36□□□□□ -0.59
CTCFL-204ENST00000422869 SSX5O60225 188 aa11.36□□□□□ -0.59
CTCFL-204ENST00000422869 LYL1P12980 280 aa11.36□□□□□ -0.59
CTCFL-204ENST00000422869 GDI1P31150 447 aa11.36□□□□□ -0.59
CTCFL-204ENST00000422869 PPT1P50897 306 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms