RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 TMEM43Q9BTV4 400 aa7.26□□□□□ -1.25
TRIM39-206ENST00000420746 METTL8Q9H825 291 aaKnown RBP7.26□□□□□ -1.25
TRIM39-206ENST00000420746 NANSQ9NR45 359 aa7.26□□□□□ -1.25
TRIM39-206ENST00000420746 ASIC5Q9NY37 505 aa7.26□□□□□ -1.25
TRIM39-206ENST00000420746 NINJ2Q9NZG7 142 aa7.26□□□□□ -1.25
TRIM39-206ENST00000420746 RNF7Q9UBF6 113 aa7.26□□□□□ -1.25
TRIM39-206ENST00000420746 HIF3AQ9Y2N7 669 aa7.26□□□□□ -1.25
TRIM39-206ENST00000420746 UTP11Q9Y3A2 253 aaKnown RBP7.26□□□□□ -1.25
TRIM39-206ENST00000420746 SF3B6Q9Y3B4 125 aaKnown RBP7.26□□□□□ -1.25
TRIM39-206ENST00000420746 FIS1Q9Y3D6 152 aa7.26□□□□□ -1.25
TRIM39-206ENST00000420746 UGT2A1Q9Y4X1 527 aa7.26□□□□□ -1.25
TRIM39-206ENST00000420746 SMAD5-AS1Q9Y6J3 95 aa7.26□□□□□ -1.25
TRIM39-206ENST00000420746 HECTD4Q9Y4D8 3996 aa7.26□□□□□ -1.25
TRIM39-206ENST00000420746 NKX6-3A6NJ46 265 aa7.25□□□□□ -1.25
TRIM39-206ENST00000420746 IQCF6A8MYZ5 107 aa7.25□□□□□ -1.25
TRIM39-206ENST00000420746 M0R1W7 72 aa7.25□□□□□ -1.25
TRIM39-206ENST00000420746 HDAC3O15379 428 aa7.25□□□□□ -1.25
TRIM39-206ENST00000420746 RNF13O43567 381 aa7.25□□□□□ -1.25
TRIM39-206ENST00000420746 G6PDP11413 515 aa7.25□□□□□ -1.25
TRIM39-206ENST00000420746 NR2C1P13056 603 aa7.25□□□□□ -1.25
TRIM39-206ENST00000420746 SLC6A1P30531 599 aa7.25□□□□□ -1.25
TRIM39-206ENST00000420746 THBS3P49746 956 aa7.25□□□□□ -1.25
TRIM39-206ENST00000420746 MRPS25P82663 173 aaKnown RBP7.25□□□□□ -1.25
TRIM39-206ENST00000420746 HOXC5Q00444 222 aa7.25□□□□□ -1.25
TRIM39-206ENST00000420746 MAD2L1Q13257 205 aaPredicted RBP7.25□□□□□ -1.25
TRIM39-206ENST00000420746 MAB21L1Q13394 359 aa7.25□□□□□ -1.25
TRIM39-206ENST00000420746 CASP8Q14790 479 aa7.25□□□□□ -1.25
TRIM39-206ENST00000420746 OR8B8Q15620 311 aa7.25□□□□□ -1.25
TRIM39-206ENST00000420746 ARSJQ5FYB0 599 aaPredicted RBP7.25□□□□□ -1.25
TRIM39-206ENST00000420746 SWT1Q5T5J6 900 aaKnown RBP7.25□□□□□ -1.25
TRIM39-206ENST00000420746 PCYOX1LQ8NBM8 494 aa7.25□□□□□ -1.25
TRIM39-206ENST00000420746 PLPP7Q8NBV4 271 aa7.25□□□□□ -1.25
TRIM39-206ENST00000420746 OR4X2Q8NGF9 303 aa7.25□□□□□ -1.25
TRIM39-206ENST00000420746 C17orf50Q8WW18 174 aa7.25□□□□□ -1.25
TRIM39-206ENST00000420746 ST8SIA4Q92187 359 aa7.25□□□□□ -1.25
TRIM39-206ENST00000420746 RASD2Q96D21 266 aa7.25□□□□□ -1.25
TRIM39-206ENST00000420746 OR5M11Q96RB7 305 aa7.25□□□□□ -1.25
TRIM39-206ENST00000420746 ECSITQ9BQ95 431 aa7.25□□□□□ -1.25
TRIM39-206ENST00000420746 RAB17Q9H0T7 212 aa7.25□□□□□ -1.25
TRIM39-206ENST00000420746 MYLK2Q9H1R3 596 aa7.25□□□□□ -1.25
TRIM39-206ENST00000420746 TAS2R5Q9NYW4 299 aa7.25□□□□□ -1.25
TRIM39-206ENST00000420746 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.25□□□□□ -1.25
TRIM39-206ENST00000420746 STX18Q9P2W9 335 aaKnown RBP7.25□□□□□ -1.25
TRIM39-206ENST00000420746 GIMAP2Q9UG22 337 aa7.25□□□□□ -1.25
TRIM39-206ENST00000420746 DCDC2Q9UHG0 476 aa7.25□□□□□ -1.25
TRIM39-206ENST00000420746 TCF19Q9Y242 345 aa7.25□□□□□ -1.25
TRIM39-206ENST00000420746 STARD10Q9Y365 291 aa7.25□□□□□ -1.25
TRIM39-206ENST00000420746 TRBV23-1A0A0A0MS06 115 aa7.24□□□□□ -1.25
TRIM39-206ENST00000420746 A0A0G2JPF8 293 aa7.24□□□□□ -1.25
TRIM39-206ENST00000420746 IGHV3-64DA0A0J9YX35 117 aa7.24□□□□□ -1.25
TRIM39-206ENST00000420746 WDR91A4D1P6 747 aa7.24□□□□□ -1.25
TRIM39-206ENST00000420746 HNRNPCL2B2RXH8 293 aa7.24□□□□□ -1.25
TRIM39-206ENST00000420746 HNRNPCL3B7ZW38 293 aa7.24□□□□□ -1.25
TRIM39-206ENST00000420746 LRRN3E7EW58 273 aa7.24□□□□□ -1.25
TRIM39-206ENST00000420746 HNRNPCL1O60812 293 aaKnown RBP7.24□□□□□ -1.25
TRIM39-206ENST00000420746 CPSF4O95639 269 aaKnown RBP7.24□□□□□ -1.25
TRIM39-206ENST00000420746 PTBP3O95758 552 aaKnown RBP7.24□□□□□ -1.25
TRIM39-206ENST00000420746 HNRNPCL4P0DMR1 293 aa7.24□□□□□ -1.25
TRIM39-206ENST00000420746 HTR2AP28223 471 aa7.24□□□□□ -1.25
TRIM39-206ENST00000420746 CDAP32320 146 aa7.24□□□□□ -1.25
TRIM39-206ENST00000420746 DPY19L1Q2PZI1 675 aa7.24□□□□□ -1.25
TRIM39-206ENST00000420746 SFRP4Q6FHJ7 346 aaPredicted RBP7.24□□□□□ -1.25
TRIM39-206ENST00000420746 OR2T2Q6IF00 324 aa7.24□□□□□ -1.25
TRIM39-206ENST00000420746 KRT77Q7Z794 578 aa7.24□□□□□ -1.25
TRIM39-206ENST00000420746 C10orf53Q8N6V4 93 aa7.24□□□□□ -1.25
TRIM39-206ENST00000420746 OR5L1Q8NGL2 311 aa7.24□□□□□ -1.25
TRIM39-206ENST00000420746 ADAMTS16Q8TE57 1224 aa7.24□□□□□ -1.25
TRIM39-206ENST00000420746 TESCQ96BS2 214 aa7.24□□□□□ -1.25
TRIM39-206ENST00000420746 NMD3Q96D46 503 aaKnown RBP7.24□□□□□ -1.25
TRIM39-206ENST00000420746 SLCO1B3Q9NPD5 702 aa7.24□□□□□ -1.25
TRIM39-206ENST00000420746 TMEM100Q9NV29 134 aa7.24□□□□□ -1.25
TRIM39-206ENST00000420746 SELENONQ9NZV5 590 aa7.24□□□□□ -1.25
TRIM39-206ENST00000420746 BTNL2Q9UIR0 455 aa7.24□□□□□ -1.25
TRIM39-206ENST00000420746 PITPNC1Q9UKF7 332 aa7.24□□□□□ -1.25
TRIM39-206ENST00000420746 EMCNQ9ULC0 261 aa7.24□□□□□ -1.25
TRIM39-206ENST00000420746 PRPF19Q9UMS4 504 aaKnown RBP7.24□□□□□ -1.25
TRIM39-206ENST00000420746 A0A0B4J2E0 115 aa7.23□□□□□ -1.25
TRIM39-206ENST00000420746 A0A1B0GX12 115 aa7.23□□□□□ -1.25
TRIM39-206ENST00000420746 A6NDX4 124 aa7.23□□□□□ -1.25
TRIM39-206ENST00000420746 GYPAP02724 150 aa7.23□□□□□ -1.25
TRIM39-206ENST00000420746 ACADSP16219 412 aa7.23□□□□□ -1.25
TRIM39-206ENST00000420746 FPR3P25089 353 aa7.23□□□□□ -1.25
TRIM39-206ENST00000420746 HTR5AP47898 357 aa7.23□□□□□ -1.25
TRIM39-206ENST00000420746 PRB3Q04118 309 aaPredicted RBP7.23□□□□□ -1.25
TRIM39-206ENST00000420746 SGCAQ16586 387 aa7.23□□□□□ -1.25
TRIM39-206ENST00000420746 CCDC153Q494R4 210 aa7.23□□□□□ -1.25
TRIM39-206ENST00000420746 RABL3Q5HYI8 236 aa7.23□□□□□ -1.25
TRIM39-206ENST00000420746 CEP85LQ5SZL2 805 aa7.23□□□□□ -1.25
TRIM39-206ENST00000420746 TEX36Q5VZQ5 186 aa7.23□□□□□ -1.25
TRIM39-206ENST00000420746 FOXL2NBQ6ZUU3 175 aa7.23□□□□□ -1.25
TRIM39-206ENST00000420746 PIGWQ7Z7B1 504 aa7.23□□□□□ -1.25
TRIM39-206ENST00000420746 CENPVQ7Z7K6 275 aaPredicted RBP7.23□□□□□ -1.25
TRIM39-206ENST00000420746 FAM90A1Q86YD7 464 aa7.23□□□□□ -1.25
TRIM39-206ENST00000420746 CPPED1Q9BRF8 314 aaPredicted RBP7.23□□□□□ -1.25
TRIM39-206ENST00000420746 NUF2Q9BZD4 464 aa7.23□□□□□ -1.25
TRIM39-206ENST00000420746 RMND5AQ9H871 391 aa7.23□□□□□ -1.25
TRIM39-206ENST00000420746 NOP16Q9Y3C1 178 aaKnown RBP7.23□□□□□ -1.25
TRIM39-206ENST00000420746 CCDC154A6NI56 674 aa7.22□□□□□ -1.25
TRIM39-206ENST00000420746 C12orf71A8MTZ7 269 aa7.22□□□□□ -1.25
TRIM39-206ENST00000420746 TMEM233B4DJY2 109 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms