RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 TNFSF4P23510 183 aa7.98□□□□□ -1.13
NUP50-205ENST00000419387 GATA3P23771 443 aa7.98□□□□□ -1.13
NUP50-205ENST00000419387 CDKN2AP42771 156 aaKnown RBP7.98□□□□□ -1.13
NUP50-205ENST00000419387 RPS6KA3P51812 740 aa7.98□□□□□ -1.13
NUP50-205ENST00000419387 SMIM11AP58511 58 aa7.98□□□□□ -1.13
NUP50-205ENST00000419387 FXYD6P3P58550 94 aa7.98□□□□□ -1.13
NUP50-205ENST00000419387 MXRA7P84157 204 aa7.98□□□□□ -1.13
NUP50-205ENST00000419387 SEC23BQ15437 767 aa7.98□□□□□ -1.13
NUP50-205ENST00000419387 KCNMB1Q16558 191 aa7.98□□□□□ -1.13
NUP50-205ENST00000419387 CCDC92Q53HC0 331 aaPredicted RBP7.98□□□□□ -1.13
NUP50-205ENST00000419387 DCAF12L2Q5VW00 463 aa7.98□□□□□ -1.13
NUP50-205ENST00000419387 OTPQ5XKR4 325 aa7.98□□□□□ -1.13
NUP50-205ENST00000419387 C1orf94Q6P1W5 598 aa7.98□□□□□ -1.13
NUP50-205ENST00000419387 SMARCD3Q6STE5 483 aa7.98□□□□□ -1.13
NUP50-205ENST00000419387 PTCHD4Q6ZW05 846 aa7.98□□□□□ -1.13
NUP50-205ENST00000419387 ADCK1Q86TW2 530 aa7.98□□□□□ -1.13
NUP50-205ENST00000419387 OR4M2Q8NGB6 313 aa7.98□□□□□ -1.13
NUP50-205ENST00000419387 OR52J3Q8NH60 311 aa7.98□□□□□ -1.13
NUP50-205ENST00000419387 OR1F12Q8NHA8 337 aa7.98□□□□□ -1.13
NUP50-205ENST00000419387 ZNF418Q8TF45 676 aaPredicted RBP7.98□□□□□ -1.13
NUP50-205ENST00000419387 SLC7A6Q92536 515 aa7.98□□□□□ -1.13
NUP50-205ENST00000419387 UTP4Q969X6 686 aaKnown RBP7.98□□□□□ -1.13
NUP50-205ENST00000419387 HAVCR1Q96D42 359 aa7.98□□□□□ -1.13
NUP50-205ENST00000419387 PYURFQ96I23 114 aa7.98□□□□□ -1.13
NUP50-205ENST00000419387 DHRS1Q96LJ7 313 aa7.98□□□□□ -1.13
NUP50-205ENST00000419387 SAMD8Q96LT4 415 aa7.98□□□□□ -1.13
NUP50-205ENST00000419387 DCLRE1CQ96SD1 692 aaKnown RBP7.98□□□□□ -1.13
NUP50-205ENST00000419387 GPA33Q99795 319 aa7.98□□□□□ -1.13
NUP50-205ENST00000419387 FUZQ9BT04 418 aa7.98□□□□□ -1.13
NUP50-205ENST00000419387 TMPRSS13Q9BYE2 586 aa7.98□□□□□ -1.13
NUP50-205ENST00000419387 KRTAP4-6Q9BYQ5 205 aa7.98□□□□□ -1.13
NUP50-205ENST00000419387 NUAK2Q9H093 628 aa7.98□□□□□ -1.13
NUP50-205ENST00000419387 ASH2LQ9UBL3 628 aa7.98□□□□□ -1.13
NUP50-205ENST00000419387 PCDHB10Q9UN67 800 aa7.98□□□□□ -1.13
NUP50-205ENST00000419387 NPTNQ9Y639 398 aa7.98□□□□□ -1.13
NUP50-205ENST00000419387 ANK2Q01484 3957 aa7.97□□□□□ -1.13
NUP50-205ENST00000419387 LOC105371242A0A075B767 164 aa7.97□□□□□ -1.13
NUP50-205ENST00000419387 OR6C6A6NF89 314 aa7.97□□□□□ -1.13
NUP50-205ENST00000419387 J3QW42 95 aa7.97□□□□□ -1.13
NUP50-205ENST00000419387 RER1O15258 196 aa7.97□□□□□ -1.13
NUP50-205ENST00000419387 SURF4O15260 269 aa7.97□□□□□ -1.13
NUP50-205ENST00000419387 GYG2O15488 501 aa7.97□□□□□ -1.13
NUP50-205ENST00000419387 DNAJC8O75937 253 aaPredicted RBP7.97□□□□□ -1.13
NUP50-205ENST00000419387 GADD45GO95257 159 aa7.97□□□□□ -1.13
NUP50-205ENST00000419387 SBK2P0C263 348 aa7.97□□□□□ -1.13
NUP50-205ENST00000419387 RAC2P15153 192 aa7.97□□□□□ -1.13
NUP50-205ENST00000419387 TNFRSF1AP19438 455 aa7.97□□□□□ -1.13
NUP50-205ENST00000419387 EPHA1P21709 976 aa7.97□□□□□ -1.13
NUP50-205ENST00000419387 CRABP1P29762 137 aa7.97□□□□□ -1.13
NUP50-205ENST00000419387 CENPAP49450 140 aa7.97□□□□□ -1.13
NUP50-205ENST00000419387 RFX4Q33E94 735 aa7.97□□□□□ -1.13
NUP50-205ENST00000419387 LCN8Q6JVE9 175 aa7.97□□□□□ -1.13
NUP50-205ENST00000419387 DNM1P34Q6PK57 102 aa7.97□□□□□ -1.13
NUP50-205ENST00000419387 CYP2R1Q6VVX0 501 aa7.97□□□□□ -1.13
NUP50-205ENST00000419387 Q6ZR03 302 aa7.97□□□□□ -1.13
NUP50-205ENST00000419387 USP43Q70EL4 1123 aa7.97□□□□□ -1.13
NUP50-205ENST00000419387 C1QL2Q7Z5L3 287 aa7.97□□□□□ -1.13
NUP50-205ENST00000419387 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.97□□□□□ -1.13
NUP50-205ENST00000419387 GJC3Q8NFK1 279 aa7.97□□□□□ -1.13
NUP50-205ENST00000419387 SEMA6DQ8NFY4 1073 aa7.97□□□□□ -1.13
NUP50-205ENST00000419387 OR2Z1Q8NG97 314 aa7.97□□□□□ -1.13
NUP50-205ENST00000419387 OR5L1Q8NGL2 311 aa7.97□□□□□ -1.13
NUP50-205ENST00000419387 NANPQ8TBE9 248 aa7.97□□□□□ -1.13
NUP50-205ENST00000419387 ST7LQ8TDW4 575 aa7.97□□□□□ -1.13
NUP50-205ENST00000419387 ZFAND2BQ8WV99 257 aa7.97□□□□□ -1.13
NUP50-205ENST00000419387 TSSK2Q96PF2 358 aa7.97□□□□□ -1.13
NUP50-205ENST00000419387 ERMAPQ96PL5 475 aaPredicted RBP7.97□□□□□ -1.13
NUP50-205ENST00000419387 SRA1Q9HD15 236 aaKnown RBP7.97□□□□□ -1.13
NUP50-205ENST00000419387 TMEM106BQ9NUM4 274 aa7.97□□□□□ -1.13
NUP50-205ENST00000419387 DCAF16Q9NXF7 216 aa7.97□□□□□ -1.13
NUP50-205ENST00000419387 UBAP1Q9NZ09 502 aa7.97□□□□□ -1.13
NUP50-205ENST00000419387 IL19Q9UHD0 177 aa7.97□□□□□ -1.13
NUP50-205ENST00000419387 ATPIF1Q9UII2 106 aa7.97□□□□□ -1.13
NUP50-205ENST00000419387 DCTN6O00399 190 aa7.96□□□□□ -1.14
NUP50-205ENST00000419387 ARPC3O15145 178 aa7.96□□□□□ -1.14
NUP50-205ENST00000419387 FOXH1O75593 365 aa7.96□□□□□ -1.14
NUP50-205ENST00000419387 PPP1R3DO95685 299 aa7.96□□□□□ -1.14
NUP50-205ENST00000419387 GPANK1O95872 356 aa7.96□□□□□ -1.14
NUP50-205ENST00000419387 IGHV2-70P01814 119 aa7.96□□□□□ -1.14
NUP50-205ENST00000419387 DBHP09172 617 aa7.96□□□□□ -1.14
NUP50-205ENST00000419387 RGS6P49758 472 aa7.96□□□□□ -1.14
NUP50-205ENST00000419387 HIST1H3AP68431 136 aa7.96□□□□□ -1.14
NUP50-205ENST00000419387 LCN2P80188 198 aa7.96□□□□□ -1.14
NUP50-205ENST00000419387 SPIBQ01892 262 aa7.96□□□□□ -1.14
NUP50-205ENST00000419387 TRAP1Q12931 704 aaKnown RBP7.96□□□□□ -1.14
NUP50-205ENST00000419387 HIST2H3PS2Q5TEC6 136 aa7.96□□□□□ -1.14
NUP50-205ENST00000419387 C12orf54Q6X4T0 127 aa7.96□□□□□ -1.14
NUP50-205ENST00000419387 FBXW12Q6X9E4 464 aa7.96□□□□□ -1.14
NUP50-205ENST00000419387 HIST2H3AQ71DI3 136 aa7.96□□□□□ -1.14
NUP50-205ENST00000419387 ZNF771Q7L3S4 317 aaPredicted RBP7.96□□□□□ -1.14
NUP50-205ENST00000419387 JAZF1Q86VZ6 243 aa7.96□□□□□ -1.14
NUP50-205ENST00000419387 LRRC28Q86X40 367 aaPredicted RBP7.96□□□□□ -1.14
NUP50-205ENST00000419387 ZNF283Q8N7M2 679 aa7.96□□□□□ -1.14
NUP50-205ENST00000419387 ATG16L2Q8NAA4 619 aa7.96□□□□□ -1.14
NUP50-205ENST00000419387 ITLN1Q8WWA0 313 aa7.96□□□□□ -1.14
NUP50-205ENST00000419387 ASB9Q96DX5 294 aa7.96□□□□□ -1.14
NUP50-205ENST00000419387 COQ7Q99807 217 aa7.96□□□□□ -1.14
NUP50-205ENST00000419387 OR52D1Q9H346 318 aa7.96□□□□□ -1.14
NUP50-205ENST00000419387 C7orf69Q9H7B7 122 aa7.96□□□□□ -1.14
NUP50-205ENST00000419387 IL1RAPQ9NPH3 570 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms