RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 PRSS3P35030 304 aa12.92□□□□□ -0.34
HLA-DPA1-242ENST00000419277 RAC3P60763 192 aa12.92□□□□□ -0.34
HLA-DPA1-242ENST00000419277 CAMK2DQ13557 499 aa12.92□□□□□ -0.34
HLA-DPA1-242ENST00000419277 C2orf76Q3KRA6 126 aa12.92□□□□□ -0.34
HLA-DPA1-242ENST00000419277 SLC25A25Q6KCM7 469 aa12.92□□□□□ -0.34
HLA-DPA1-242ENST00000419277 ZNF529Q6P280 563 aa12.92□□□□□ -0.34
HLA-DPA1-242ENST00000419277 LINC00346Q8IVM7 164 aa12.92□□□□□ -0.34
HLA-DPA1-242ENST00000419277 SLC22A24Q8N4F4 322 aa12.92□□□□□ -0.34
HLA-DPA1-242ENST00000419277 SLC25A28Q96A46 364 aa12.92□□□□□ -0.34
HLA-DPA1-242ENST00000419277 C10orf35Q96D05 121 aa12.92□□□□□ -0.34
HLA-DPA1-242ENST00000419277 FOXN4Q96NZ1 517 aa12.92□□□□□ -0.34
HLA-DPA1-242ENST00000419277 FYTTD1Q96QD9 318 aaKnown RBP12.92□□□□□ -0.34
HLA-DPA1-242ENST00000419277 CDC6Q99741 560 aa12.92□□□□□ -0.34
HLA-DPA1-242ENST00000419277 EMC6Q9BV81 110 aa12.92□□□□□ -0.34
HLA-DPA1-242ENST00000419277 PBOV1Q9GZY1 135 aa12.92□□□□□ -0.34
HLA-DPA1-242ENST00000419277 PROK2Q9HC23 129 aa12.92□□□□□ -0.34
HLA-DPA1-242ENST00000419277 TAS2R4Q9NYW5 299 aa12.92□□□□□ -0.34
HLA-DPA1-242ENST00000419277 GLTPQ9NZD2 209 aa12.92□□□□□ -0.34
HLA-DPA1-242ENST00000419277 TRAV6A0A075B6T7 132 aa12.91□□□□□ -0.34
HLA-DPA1-242ENST00000419277 CIB4A0PJX0 185 aa12.91□□□□□ -0.34
HLA-DPA1-242ENST00000419277 LPLP06858 475 aa12.91□□□□□ -0.34
HLA-DPA1-242ENST00000419277 MELTFP08582 738 aa12.91□□□□□ -0.34
HLA-DPA1-242ENST00000419277 ZMYND11Q15326 602 aa12.91□□□□□ -0.34
HLA-DPA1-242ENST00000419277 TAF13Q15543 124 aa12.91□□□□□ -0.34
HLA-DPA1-242ENST00000419277 ODF4Q2M2E3 257 aa12.91□□□□□ -0.34
HLA-DPA1-242ENST00000419277 CREB3L2Q70SY1 520 aa12.91□□□□□ -0.34
HLA-DPA1-242ENST00000419277 PRSS45Q7RTY3 260 aa12.91□□□□□ -0.34
HLA-DPA1-242ENST00000419277 GLCCI1Q86VQ1 547 aa12.91□□□□□ -0.34
HLA-DPA1-242ENST00000419277 GJC3Q8NFK1 279 aa12.91□□□□□ -0.34
HLA-DPA1-242ENST00000419277 GIMAP1Q8WWP7 306 aa12.91□□□□□ -0.34
HLA-DPA1-242ENST00000419277 TMEM54Q969K7 222 aa12.91□□□□□ -0.34
HLA-DPA1-242ENST00000419277 TP63Q9H3D4 680 aaPredicted RBP12.91□□□□□ -0.34
HLA-DPA1-242ENST00000419277 TMEM185BQ9H7F4 350 aa12.91□□□□□ -0.34
HLA-DPA1-242ENST00000419277 FARSAQ9Y285 508 aaKnown RBP12.91□□□□□ -0.34
HLA-DPA1-242ENST00000419277 PCDHGA1Q9Y5H4 931 aa12.91□□□□□ -0.34
HLA-DPA1-242ENST00000419277 VCANP13611 3396 aa12.91□□□□□ -0.34
HLA-DPA1-242ENST00000419277 EML6Q6ZMW3 1958 aa12.91□□□□□ -0.34
HLA-DPA1-242ENST00000419277 A0A087WV48 116 aa12.91□□□□□ -0.34
HLA-DPA1-242ENST00000419277 CCDC187A0A096LP49 1063 aa12.91□□□□□ -0.34
HLA-DPA1-242ENST00000419277 TMEM272A0A1B0GTI8 110 aa12.91□□□□□ -0.34
HLA-DPA1-242ENST00000419277 LNP1A1A4G5 178 aa12.91□□□□□ -0.34
HLA-DPA1-242ENST00000419277 AGRPO00253 132 aa12.91□□□□□ -0.34
HLA-DPA1-242ENST00000419277 LDLRAD4O15165 306 aa12.91□□□□□ -0.34
HLA-DPA1-242ENST00000419277 ZIC3O60481 467 aa12.91□□□□□ -0.34
HLA-DPA1-242ENST00000419277 NDUFB6O95139 128 aa12.91□□□□□ -0.34
HLA-DPA1-242ENST00000419277 WNT11O96014 354 aa12.91□□□□□ -0.34
HLA-DPA1-242ENST00000419277 MT-ND4P03905 459 aa12.91□□□□□ -0.34
HLA-DPA1-242ENST00000419277 QDPRP09417 244 aa12.91□□□□□ -0.34
HLA-DPA1-242ENST00000419277 AKAIN1P0CW23 69 aa12.91□□□□□ -0.34
HLA-DPA1-242ENST00000419277 TCN2P20062 427 aa12.91□□□□□ -0.34
HLA-DPA1-242ENST00000419277 RAB3AP20336 220 aa12.91□□□□□ -0.34
HLA-DPA1-242ENST00000419277 S100A1P23297 94 aa12.91□□□□□ -0.34
HLA-DPA1-242ENST00000419277 HOXD11P31277 338 aaPredicted RBP12.91□□□□□ -0.34
HLA-DPA1-242ENST00000419277 RCVRNP35243 200 aa12.91□□□□□ -0.34
HLA-DPA1-242ENST00000419277 ZNF84P51523 738 aa12.91□□□□□ -0.34
HLA-DPA1-242ENST00000419277 NKX2-5P52952 324 aaPredicted RBP12.91□□□□□ -0.34
HLA-DPA1-242ENST00000419277 GLYATL3Q5SZD4 288 aa12.91□□□□□ -0.34
HLA-DPA1-242ENST00000419277 CDCP2Q5VXM1 449 aa12.91□□□□□ -0.34
HLA-DPA1-242ENST00000419277 ASPHD2Q6ICH7 369 aa12.91□□□□□ -0.34
HLA-DPA1-242ENST00000419277 ZNF782Q6ZMW2 699 aaPredicted RBP12.91□□□□□ -0.34
HLA-DPA1-242ENST00000419277 DOK3Q7L591 496 aa12.91□□□□□ -0.34
HLA-DPA1-242ENST00000419277 LYPD6Q86Y78 171 aa12.91□□□□□ -0.34
HLA-DPA1-242ENST00000419277 IZUMO1Q8IYV9 350 aa12.91□□□□□ -0.34
HLA-DPA1-242ENST00000419277 PLPP7Q8NBV4 271 aa12.91□□□□□ -0.34
HLA-DPA1-242ENST00000419277 RADILQ96JH8 1075 aa12.91□□□□□ -0.34
HLA-DPA1-242ENST00000419277 ARRDC1-AS1Q9H2J1 176 aa12.91□□□□□ -0.34
HLA-DPA1-242ENST00000419277 SEC61A2Q9H9S3 476 aa12.91□□□□□ -0.34
HLA-DPA1-242ENST00000419277 PAQR5Q9NXK6 330 aaPredicted RBP12.91□□□□□ -0.34
HLA-DPA1-242ENST00000419277 ABI3Q9P2A4 366 aa12.91□□□□□ -0.34
HLA-DPA1-242ENST00000419277 UPB1Q9UBR1 384 aa12.91□□□□□ -0.34
HLA-DPA1-242ENST00000419277 RAB22AQ9UL26 194 aa12.91□□□□□ -0.34
HLA-DPA1-242ENST00000419277 SLC5A6Q9Y289 635 aa12.91□□□□□ -0.34
HLA-DPA1-242ENST00000419277 GDF9O60383 454 aa12.9□□□□□ -0.34
HLA-DPA1-242ENST00000419277 ALX3O95076 343 aa12.9□□□□□ -0.34
HLA-DPA1-242ENST00000419277 UBBP0CG47 229 aa12.9□□□□□ -0.34
HLA-DPA1-242ENST00000419277 CASRP41180 1078 aa12.9□□□□□ -0.34
HLA-DPA1-242ENST00000419277 CYB561P49447 251 aa12.9□□□□□ -0.34
HLA-DPA1-242ENST00000419277 CLDN17P56750 224 aa12.9□□□□□ -0.34
HLA-DPA1-242ENST00000419277 TAS2R19P59542 299 aa12.9□□□□□ -0.34
HLA-DPA1-242ENST00000419277 INPP5JQ15735 1006 aaPredicted RBP12.9□□□□□ -0.34
HLA-DPA1-242ENST00000419277 PCGF3Q3KNV8 242 aa12.9□□□□□ -0.34
HLA-DPA1-242ENST00000419277 ZNF813Q6ZN06 617 aa12.9□□□□□ -0.34
HLA-DPA1-242ENST00000419277 OR2W3Q7Z3T1 314 aa12.9□□□□□ -0.34
HLA-DPA1-242ENST00000419277 BEST3Q8N1M1 668 aa12.9□□□□□ -0.34
HLA-DPA1-242ENST00000419277 DTX3Q8N9I9 347 aa12.9□□□□□ -0.34
HLA-DPA1-242ENST00000419277 OR9K2Q8NGE7 335 aa12.9□□□□□ -0.34
HLA-DPA1-242ENST00000419277 GPX8Q8TED1 209 aa12.9□□□□□ -0.34
HLA-DPA1-242ENST00000419277 CT55Q8WUE5 264 aa12.9□□□□□ -0.34
HLA-DPA1-242ENST00000419277 DMRTB1Q96MA1 342 aa12.9□□□□□ -0.34
HLA-DPA1-242ENST00000419277 SPRY4Q9C004 299 aa12.9□□□□□ -0.34
HLA-DPA1-242ENST00000419277 KLK11Q9UBX7 282 aa12.9□□□□□ -0.34
HLA-DPA1-242ENST00000419277 FLVCR1Q9Y5Y0 555 aa12.9□□□□□ -0.34
HLA-DPA1-242ENST00000419277 NPTNQ9Y639 398 aa12.9□□□□□ -0.34
HLA-DPA1-242ENST00000419277 A0A0U1RQV5 110 aa12.89□□□□□ -0.35
HLA-DPA1-242ENST00000419277 DHRS7CA6NNS2 312 aa12.89□□□□□ -0.35
HLA-DPA1-242ENST00000419277 H0YC42 278 aa12.89□□□□□ -0.35
HLA-DPA1-242ENST00000419277 ALDOBP05062 364 aa12.89□□□□□ -0.35
HLA-DPA1-242ENST00000419277 CELA2AP08217 269 aa12.89□□□□□ -0.35
HLA-DPA1-242ENST00000419277 SULT1A3P0DMM9 295 aa12.89□□□□□ -0.35
HLA-DPA1-242ENST00000419277 SULT1A4P0DMN0 295 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms