RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 CYTIPO60759 359 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 HPGDSO60760 199 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 TSC22D2O75157 780 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 NME6O75414 186 aaPredicted RBP2.24□□□□□ -2.05
VPS41-206ENST00000418457 GCM2O75603 506 aaPredicted RBP2.24□□□□□ -2.05
VPS41-206ENST00000418457 REM1O75628 298 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 B3GALNT1O75752 331 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 ARL6IP5O75915 188 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 UBL3O95164 117 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 LDOC1O95751 146 aaPredicted RBP2.24□□□□□ -2.05
VPS41-206ENST00000418457 IGSF6O95976 241 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 SERPINA3P01011 423 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 OPN1SWP03999 348 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 TCRBP04435 133 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 RLN1P04808 185 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 HMGN1P05114 100 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 SERPIND1P05546 499 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 HOXD4P09016 255 aaPredicted RBP2.24□□□□□ -2.05
VPS41-206ENST00000418457 GIPP09681 153 aaPredicted RBP2.24□□□□□ -2.05
VPS41-206ENST00000418457 SULT1A3P0DMM9 295 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 SULT1A4P0DMN0 295 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 IFI30P13284 250 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 CD59P13987 128 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 ATP1B2P14415 290 aaPredicted RBP2.24□□□□□ -2.05
VPS41-206ENST00000418457 PRKACAP17612 351 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 RAB3AP20336 220 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 AHCYP23526 432 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 AQP1P29972 269 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 CALCRP30988 508 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 TLX1P31314 330 aaPredicted RBP2.24□□□□□ -2.05
VPS41-206ENST00000418457 DUTP33316 252 aaKnown RBP2.24□□□□□ -2.05
VPS41-206ENST00000418457 EVI2BP34910 448 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 NUP62P37198 522 aaPredicted RBP2.24□□□□□ -2.05
VPS41-206ENST00000418457 ETV5P41161 510 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 OR1E2P47887 323 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 TPMTP51580 245 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 ARFIP1P53367 373 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 CRISP3P54108 245 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 OR1D5P58170 312 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 PFN3P60673 137 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 B2MP61769 119 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 SNRPD2P62316 118 aaKnown RBP2.24□□□□□ -2.05
VPS41-206ENST00000418457 RPS25P62851 125 aaKnown RBP2.24□□□□□ -2.05
VPS41-206ENST00000418457 HBA1P69905 142 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 MRPS10P82664 201 aaKnown RBP2.24□□□□□ -2.05
VPS41-206ENST00000418457 ARF5P84085 180 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 HOXC5Q00444 222 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 CDK5Q00535 292 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 FABP5Q01469 135 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 FLI1Q01543 452 aaPredicted RBP2.24□□□□□ -2.05
VPS41-206ENST00000418457 CSTF1Q05048 431 aaKnown RBP2.24□□□□□ -2.05
VPS41-206ENST00000418457 MXD1Q05195 221 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 PUDPQ08623 228 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 ELAVL2Q12926 359 aaKnown RBP2.24□□□□□ -2.05
VPS41-206ENST00000418457 TSPAN31Q12999 210 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 RPA4Q13156 261 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 TRA2AQ13595 282 aaKnown RBP eCLIP2.24□□□□□ -2.05
VPS41-206ENST00000418457 DDX39BQ13838 428 aaKnown RBP2.24□□□□□ -2.05
VPS41-206ENST00000418457 EXOSC2Q13868 293 aaKnown RBP2.24□□□□□ -2.05
VPS41-206ENST00000418457 DOC2AQ14183 400 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 GINS1Q14691 196 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 NHLRC3Q5JS37 347 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 HENMT1Q5T8I9 393 aaKnown RBP2.24□□□□□ -2.05
VPS41-206ENST00000418457 METTL11BQ5VVY1 283 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 FAM46CQ5VWP2 391 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 FAM71E1Q6IPT2 247 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 ADNP2Q6IQ32 1131 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 FAAP20Q6NZ36 180 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 C1orf94Q6P1W5 598 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 CD300LGQ6UXG3 332 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 WASH2PQ6VEQ5 465 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 RASSF6Q6ZTQ3 369 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 PGAP1Q75T13 922 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 GPR142Q7Z601 462 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 OAFQ86UD1 273 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 LRRTM1Q86UE6 522 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 SERINC5Q86VE9 423 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 THOC6Q86W42 341 aaKnown RBP2.24□□□□□ -2.05
VPS41-206ENST00000418457 MARCH9Q86YJ5 346 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 GID4Q8IVV7 300 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 CCDC36Q8IYA8 594 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 OR6V1Q8N148 313 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 SLC43A2Q8N370 569 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 STPG2Q8N412 459 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 SPICQ8N5J4 248 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 MS4A15Q8N5U1 240 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 ARIH2OSQ8N7S6 290 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 TCEANCQ8N8B7 351 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 SYT14Q8NB59 555 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 NUP37Q8NFH4 326 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 OR4M2Q8NGB6 313 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 OR4D10Q8NGI6 311 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 OR2T4Q8NH00 348 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 OR52P1PQ8NH57 321 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 OR52J3Q8NH60 311 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 RPLP0P6Q8NHW5 317 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 CDC26Q8NHZ8 85 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 SLC7A13Q8TCU3 470 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 RAET1EQ8TD07 263 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 LKAAEAR1Q8TD35 194 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms