RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 KCNS3Q9BQ31 491 aa15.35■□□□□ 0.05
VCP-202ENST00000417448 WNT5BQ9H1J7 359 aa15.35■□□□□ 0.05
VCP-202ENST00000417448 KCNN2Q9H2S1 579 aa15.35■□□□□ 0.05
VCP-202ENST00000417448 ESM1Q9NQ30 184 aa15.35■□□□□ 0.05
VCP-202ENST00000417448 KRT84Q9NSB2 600 aa15.35■□□□□ 0.05
VCP-202ENST00000417448 M0R129 80 aa15.34■□□□□ 0.05
VCP-202ENST00000417448 BAG2O95816 211 aa15.34■□□□□ 0.05
VCP-202ENST00000417448 CRYAAP02489 173 aa15.34■□□□□ 0.05
VCP-202ENST00000417448 TFP02787 698 aa15.34■□□□□ 0.05
VCP-202ENST00000417448 CST2P09228 141 aa15.34■□□□□ 0.05
VCP-202ENST00000417448 EPHA1P21709 976 aa15.34■□□□□ 0.05
VCP-202ENST00000417448 POLR2IP36954 125 aaKnown RBP15.34■□□□□ 0.05
VCP-202ENST00000417448 GUCA1AP43080 201 aaPredicted RBP15.34■□□□□ 0.05
VCP-202ENST00000417448 CRISP1P54107 249 aa15.34■□□□□ 0.05
VCP-202ENST00000417448 HSF2Q03933 536 aa15.34■□□□□ 0.05
VCP-202ENST00000417448 CORO6Q6QEF8 472 aa15.34■□□□□ 0.05
VCP-202ENST00000417448 SHISA2Q6UWI4 295 aa15.34■□□□□ 0.05
VCP-202ENST00000417448 NEU4Q8WWR8 484 aaPredicted RBP15.34■□□□□ 0.05
VCP-202ENST00000417448 NBEAL2Q6ZNJ1 2754 aa15.33■□□□□ 0.04
VCP-202ENST00000417448 AVPP01185 164 aa15.33■□□□□ 0.04
VCP-202ENST00000417448 HLA-DQA2P01906 255 aa15.33■□□□□ 0.04
VCP-202ENST00000417448 SERPINA5P05154 406 aa15.33■□□□□ 0.04
VCP-202ENST00000417448 GAAP10253 952 aa15.33■□□□□ 0.04
VCP-202ENST00000417448 CCNOP22674 350 aa15.33■□□□□ 0.04
VCP-202ENST00000417448 CRABP1P29762 137 aa15.33■□□□□ 0.04
VCP-202ENST00000417448 GRK5P34947 590 aa15.33■□□□□ 0.04
VCP-202ENST00000417448 RPS27P42677 84 aaKnown RBP15.33■□□□□ 0.04
VCP-202ENST00000417448 CDK5Q00535 292 aa15.33■□□□□ 0.04
VCP-202ENST00000417448 SCGB2A2Q13296 93 aa15.33■□□□□ 0.04
VCP-202ENST00000417448 KDM4DQ6B0I6 523 aa15.33■□□□□ 0.04
VCP-202ENST00000417448 SLC27A4Q6P1M0 643 aa15.33■□□□□ 0.04
VCP-202ENST00000417448 ZFP1Q6P2D0 407 aa15.33■□□□□ 0.04
VCP-202ENST00000417448 LINC00346Q8IVM7 164 aa15.33■□□□□ 0.04
VCP-202ENST00000417448 FAM169BQ8N8A8 192 aa15.33■□□□□ 0.04
VCP-202ENST00000417448 PROKR2Q8NFJ6 384 aa15.33■□□□□ 0.04
VCP-202ENST00000417448 UBASH3BQ8TF42 649 aa15.33■□□□□ 0.04
VCP-202ENST00000417448 DOK1Q99704 481 aa15.33■□□□□ 0.04
VCP-202ENST00000417448 CIB1Q99828 191 aa15.33■□□□□ 0.04
VCP-202ENST00000417448 OR2H1Q9GZK4 316 aa15.33■□□□□ 0.04
VCP-202ENST00000417448 GABARAPL1Q9H0R8 117 aa15.33■□□□□ 0.04
VCP-202ENST00000417448 KLHL21Q9UJP4 597 aa15.33■□□□□ 0.04
VCP-202ENST00000417448 BAIAP2Q9UQB8 552 aa15.33■□□□□ 0.04
VCP-202ENST00000417448 LOC100509620A0A075B734 347 aa15.32■□□□□ 0.04
VCP-202ENST00000417448 RIIAD1A6NNX1 92 aa15.32■□□□□ 0.04
VCP-202ENST00000417448 FAM157BP0CG42 384 aa15.32■□□□□ 0.04
VCP-202ENST00000417448 PSKH1P11801 424 aa15.32■□□□□ 0.04
VCP-202ENST00000417448 ZNF35P13682 527 aa15.32■□□□□ 0.04
VCP-202ENST00000417448 THBS4P35443 961 aa15.32■□□□□ 0.04
VCP-202ENST00000417448 MSMPQ1L6U9 139 aa15.32■□□□□ 0.04
VCP-202ENST00000417448 C3orf36Q3SXR2 165 aa15.32■□□□□ 0.04
VCP-202ENST00000417448 NRN1LQ496H8 165 aa15.32■□□□□ 0.04
VCP-202ENST00000417448 TMEM154Q6P9G4 183 aa15.32■□□□□ 0.04
VCP-202ENST00000417448 DNM1P34Q6PK57 102 aa15.32■□□□□ 0.04
VCP-202ENST00000417448 ZBTB46Q86UZ6 589 aa15.32■□□□□ 0.04
VCP-202ENST00000417448 ZDHHC22Q8N966 263 aa15.32■□□□□ 0.04
VCP-202ENST00000417448 ZNF511Q8NB15 262 aa15.32■□□□□ 0.04
VCP-202ENST00000417448 SLC30A7Q8NEW0 376 aa15.32■□□□□ 0.04
VCP-202ENST00000417448 CLDND2Q8NHS1 167 aa15.32■□□□□ 0.04
VCP-202ENST00000417448 SLC7A6Q92536 515 aa15.32■□□□□ 0.04
VCP-202ENST00000417448 PTP4A1Q93096 173 aa15.32■□□□□ 0.04
VCP-202ENST00000417448 NARFLQ9H6Q4 476 aa15.32■□□□□ 0.04
VCP-202ENST00000417448 CMC2Q9NRP2 79 aa15.32■□□□□ 0.04
VCP-202ENST00000417448 MRPL22Q9NWU5 206 aaKnown RBP15.32■□□□□ 0.04
VCP-202ENST00000417448 TVP23BQ9NYZ1 205 aa15.32■□□□□ 0.04
VCP-202ENST00000417448 ASH2LQ9UBL3 628 aa15.32■□□□□ 0.04
VCP-202ENST00000417448 FZR1Q9UM11 496 aa15.32■□□□□ 0.04
VCP-202ENST00000417448 WNK2Q9Y3S1 2297 aa15.32■□□□□ 0.04
VCP-202ENST00000417448 LOC105371242A0A075B767 164 aa15.31■□□□□ 0.04
VCP-202ENST00000417448 IQCMA0A1B0GVH7 501 aa15.31■□□□□ 0.04
VCP-202ENST00000417448 TMEM129A0AVI4 362 aa15.31■□□□□ 0.04
VCP-202ENST00000417448 C12orf71A8MTZ7 269 aa15.31■□□□□ 0.04
VCP-202ENST00000417448 WNT9BO14905 357 aa15.31■□□□□ 0.04
VCP-202ENST00000417448 RER1O15258 196 aa15.31■□□□□ 0.04
VCP-202ENST00000417448 MSMBP08118 114 aa15.31■□□□□ 0.04
VCP-202ENST00000417448 SPI1P17947 270 aa15.31■□□□□ 0.04
VCP-202ENST00000417448 ERVS71-1P61550 626 aa15.31■□□□□ 0.04
VCP-202ENST00000417448 TEKQ02763 1124 aa15.31■□□□□ 0.04
VCP-202ENST00000417448 PLP2Q04941 152 aa15.31■□□□□ 0.04
VCP-202ENST00000417448 SNTB2Q13425 540 aaKnown RBP15.31■□□□□ 0.04
VCP-202ENST00000417448 PTGES3Q15185 160 aaKnown RBP15.31■□□□□ 0.04
VCP-202ENST00000417448 ZIK1Q3SY52 487 aaPredicted RBP15.31■□□□□ 0.04
VCP-202ENST00000417448 C1QTNF12Q5T7M4 302 aa15.31■□□□□ 0.04
VCP-202ENST00000417448 HIST2H2BDQ6DRA6 164 aa15.31■□□□□ 0.04
VCP-202ENST00000417448 PLBD1Q6P4A8 553 aa15.31■□□□□ 0.04
VCP-202ENST00000417448 BBS1Q8NFJ9 593 aa15.31■□□□□ 0.04
VCP-202ENST00000417448 SLC26A10Q8NG04 563 aa15.31■□□□□ 0.04
VCP-202ENST00000417448 MRPL24Q96A35 216 aaKnown RBP15.31■□□□□ 0.04
VCP-202ENST00000417448 JMJD8Q96S16 334 aa15.31■□□□□ 0.04
VCP-202ENST00000417448 OSBPL10Q9BXB5 764 aa15.31■□□□□ 0.04
VCP-202ENST00000417448 NMNAT2Q9BZQ4 307 aa15.31■□□□□ 0.04
VCP-202ENST00000417448 RACGAP1Q9H0H5 632 aa15.31■□□□□ 0.04
VCP-202ENST00000417448 OR51V1Q9H2C8 321 aa15.31■□□□□ 0.04
VCP-202ENST00000417448 RIBC2Q9H4K1 309 aa15.31■□□□□ 0.04
VCP-202ENST00000417448 POLR1DQ9Y2S0 133 aa15.31■□□□□ 0.04
VCP-202ENST00000417448 GRIP1Q9Y3R0 1128 aa15.31■□□□□ 0.04
VCP-202ENST00000417448 TIMM10BQ9Y5J6 103 aa15.31■□□□□ 0.04
VCP-202ENST00000417448 LHFPL6Q9Y693 200 aa15.31■□□□□ 0.04
VCP-202ENST00000417448 SURF4O15260 269 aa15.3■□□□□ 0.04
VCP-202ENST00000417448 IFNGP01579 166 aa15.3■□□□□ 0.04
VCP-202ENST00000417448 STOMP27105 288 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms