RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 GSK3AP49840 483 aa9.64□□□□□ -0.87
COL12A1-203ENST00000416123 ZNF121P58317 390 aaPredicted RBP9.64□□□□□ -0.87
COL12A1-203ENST00000416123 TMEM179BQ7Z7N9 219 aa9.64□□□□□ -0.87
COL12A1-203ENST00000416123 GCNT2Q8N0V5 402 aa9.64□□□□□ -0.87
COL12A1-203ENST00000416123 AKR7LQ8NHP1 331 aa9.64□□□□□ -0.87
COL12A1-203ENST00000416123 IP6K3Q96PC2 410 aa9.64□□□□□ -0.87
COL12A1-203ENST00000416123 SEC22CQ9BRL7 303 aa9.64□□□□□ -0.87
COL12A1-203ENST00000416123 PRSS37A4D1T9 235 aa9.64□□□□□ -0.87
COL12A1-203ENST00000416123 LAP3P28838 519 aa9.64□□□□□ -0.87
COL12A1-203ENST00000416123 ZNF620Q6ZNG0 422 aa9.64□□□□□ -0.87
COL12A1-203ENST00000416123 NRTNQ99748 197 aa9.64□□□□□ -0.87
COL12A1-203ENST00000416123 RIMS4Q9H426 269 aaPredicted RBP9.64□□□□□ -0.87
COL12A1-203ENST00000416123 GHRLQ9UBU3 117 aa9.64□□□□□ -0.87
COL12A1-203ENST00000416123 C1orf196B1AJZ1 125 aa9.64□□□□□ -0.87
COL12A1-203ENST00000416123 CLN5O75503 358 aa9.64□□□□□ -0.87
COL12A1-203ENST00000416123 NFYAP23511 347 aaPredicted RBP9.64□□□□□ -0.87
COL12A1-203ENST00000416123 GPM6AP51674 278 aa9.64□□□□□ -0.87
COL12A1-203ENST00000416123 ZNF766Q5HY98 468 aa9.64□□□□□ -0.87
COL12A1-203ENST00000416123 DHRS4L2Q6PKH6 230 aa9.64□□□□□ -0.87
COL12A1-203ENST00000416123 ARIH2OSQ8N7S6 290 aa9.64□□□□□ -0.87
COL12A1-203ENST00000416123 RHOXF1Q8NHV9 184 aa9.64□□□□□ -0.87
COL12A1-203ENST00000416123 RDH5Q92781 318 aa9.64□□□□□ -0.87
COL12A1-203ENST00000416123 PARP14Q460N5 1801 aa9.64□□□□□ -0.87
COL12A1-203ENST00000416123 A0A087WV62 115 aa9.64□□□□□ -0.87
COL12A1-203ENST00000416123 ZNF816-ZNF321PA0A0X1KG74 233 aa9.64□□□□□ -0.87
COL12A1-203ENST00000416123 OR6C65A6NJZ3 312 aa9.64□□□□□ -0.87
COL12A1-203ENST00000416123 FIGNL2A6NMB9 653 aa9.64□□□□□ -0.87
COL12A1-203ENST00000416123 C17orf112F2Z3M2 114 aa9.64□□□□□ -0.87
COL12A1-203ENST00000416123 H0Y8G0 127 aa9.64□□□□□ -0.87
COL12A1-203ENST00000416123 SPRY3O43610 288 aa9.64□□□□□ -0.87
COL12A1-203ENST00000416123 SELEP16581 610 aa9.64□□□□□ -0.87
COL12A1-203ENST00000416123 SOX18P35713 384 aa9.64□□□□□ -0.87
COL12A1-203ENST00000416123 TGFBR1P36897 503 aa9.64□□□□□ -0.87
COL12A1-203ENST00000416123 RELAQ04206 551 aa9.64□□□□□ -0.87
COL12A1-203ENST00000416123 CD300LGQ6UXG3 332 aa9.64□□□□□ -0.87
COL12A1-203ENST00000416123 ZNF321PQ8N8H1 164 aa9.64□□□□□ -0.87
COL12A1-203ENST00000416123 AMER3Q8N944 861 aa9.64□□□□□ -0.87
COL12A1-203ENST00000416123 ST7LQ8TDW4 575 aa9.64□□□□□ -0.87
COL12A1-203ENST00000416123 CNRIP1Q96F85 164 aaPredicted RBP9.64□□□□□ -0.87
COL12A1-203ENST00000416123 SHARPINQ9H0F6 387 aa9.64□□□□□ -0.87
COL12A1-203ENST00000416123 OPRM1P35372 400 aa9.64□□□□□ -0.87
COL12A1-203ENST00000416123 TRBV5-4A0A0C4DH59 114 aa9.64□□□□□ -0.87
COL12A1-203ENST00000416123 NME1P15531 152 aaKnown RBP9.64□□□□□ -0.87
COL12A1-203ENST00000416123 GABRA4P48169 554 aa9.64□□□□□ -0.87
COL12A1-203ENST00000416123 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.64□□□□□ -0.87
COL12A1-203ENST00000416123 OR1S2Q8NGQ3 325 aa9.64□□□□□ -0.87
COL12A1-203ENST00000416123 KCTD12Q96CX2 325 aaKnown RBP9.64□□□□□ -0.87
COL12A1-203ENST00000416123 SEC16AO15027 2179 aa9.64□□□□□ -0.87
COL12A1-203ENST00000416123 IGHV1OR15-9A0A0B4J2B8 117 aa9.64□□□□□ -0.87
COL12A1-203ENST00000416123 CPEP16870 476 aa9.64□□□□□ -0.87
COL12A1-203ENST00000416123 ZNF767PQ75MW2 155 aa9.64□□□□□ -0.87
COL12A1-203ENST00000416123 CPEB3Q8NE35 698 aaKnown RBP9.64□□□□□ -0.87
COL12A1-203ENST00000416123 ZNF436Q9C0F3 470 aaPredicted RBP9.64□□□□□ -0.87
COL12A1-203ENST00000416123 S1PR5Q9H228 398 aa9.64□□□□□ -0.87
COL12A1-203ENST00000416123 FBXL4Q9UKA2 621 aa9.64□□□□□ -0.87
COL12A1-203ENST00000416123 SSUH2Q9Y2M2 353 aa9.64□□□□□ -0.87
COL12A1-203ENST00000416123 CCDC187A0A096LP49 1063 aa9.63□□□□□ -0.87
COL12A1-203ENST00000416123 OR2A25A4D2G3 310 aa9.63□□□□□ -0.87
COL12A1-203ENST00000416123 ZNF705FA8MVS1 300 aaPredicted RBP9.63□□□□□ -0.87
COL12A1-203ENST00000416123 K7EQS6 105 aa9.63□□□□□ -0.87
COL12A1-203ENST00000416123 OLFM2O95897 454 aa9.63□□□□□ -0.87
COL12A1-203ENST00000416123 UBBP0CG47 229 aa9.63□□□□□ -0.87
COL12A1-203ENST00000416123 ZNF705DP0CH99 300 aaPredicted RBP9.63□□□□□ -0.87
COL12A1-203ENST00000416123 ZNF705BP0CI00 300 aaPredicted RBP9.63□□□□□ -0.87
COL12A1-203ENST00000416123 RPS27AP62979 156 aaKnown RBP9.63□□□□□ -0.87
COL12A1-203ENST00000416123 UBA52P62987 128 aaKnown RBP9.63□□□□□ -0.87
COL12A1-203ENST00000416123 INSM1Q01101 510 aaPredicted RBP9.63□□□□□ -0.87
COL12A1-203ENST00000416123 ADGRF3Q8IZF5 1079 aa9.63□□□□□ -0.87
COL12A1-203ENST00000416123 ORAI1Q96D31 301 aa9.63□□□□□ -0.87
COL12A1-203ENST00000416123 TRMT61AQ96FX7 289 aaKnown RBP9.63□□□□□ -0.87
COL12A1-203ENST00000416123 PKMYT1Q99640 499 aa9.63□□□□□ -0.87
COL12A1-203ENST00000416123 ZCCHC4Q9H5U6 513 aa9.63□□□□□ -0.87
COL12A1-203ENST00000416123 SDCBPO00560 298 aaPredicted RBP9.63□□□□□ -0.87
COL12A1-203ENST00000416123 SSX4O60224 188 aa9.63□□□□□ -0.87
COL12A1-203ENST00000416123 HOXB3P14651 431 aaPredicted RBP9.63□□□□□ -0.87
COL12A1-203ENST00000416123 HABP2Q14520 560 aaPredicted RBP9.63□□□□□ -0.87
COL12A1-203ENST00000416123 FAAP20Q6NZ36 180 aa9.63□□□□□ -0.87
COL12A1-203ENST00000416123 TMEM81Q6P7N7 255 aa9.63□□□□□ -0.87
COL12A1-203ENST00000416123 OR1L3Q8NH93 324 aa9.63□□□□□ -0.87
COL12A1-203ENST00000416123 SARAFQ96BY9 339 aa9.63□□□□□ -0.87
COL12A1-203ENST00000416123 SLC39A9Q9NUM3 307 aa9.63□□□□□ -0.87
COL12A1-203ENST00000416123 SLC22A13Q9Y226 551 aa9.63□□□□□ -0.87
COL12A1-203ENST00000416123 PMS2P1A4D2B8 440 aa9.63□□□□□ -0.87
COL12A1-203ENST00000416123 HAAOP46952 286 aa9.63□□□□□ -0.87
COL12A1-203ENST00000416123 HBG1P69891 147 aa9.63□□□□□ -0.87
COL12A1-203ENST00000416123 HBG2P69892 147 aa9.63□□□□□ -0.87
COL12A1-203ENST00000416123 FZD2Q14332 565 aa9.63□□□□□ -0.87
COL12A1-203ENST00000416123 LPCAT3Q6P1A2 487 aa9.63□□□□□ -0.87
COL12A1-203ENST00000416123 OR51A4Q8NGJ6 313 aa9.63□□□□□ -0.87
COL12A1-203ENST00000416123 OR51A2Q8NGJ7 313 aa9.63□□□□□ -0.87
COL12A1-203ENST00000416123 MEIKINA0A087WXM9 373 aa9.63□□□□□ -0.87
COL12A1-203ENST00000416123 KIRREL2Q6UWL6 708 aa9.63□□□□□ -0.87
COL12A1-203ENST00000416123 LHFPL2Q6ZUX7 228 aa9.63□□□□□ -0.87
COL12A1-203ENST00000416123 LIN37Q96GY3 246 aaPredicted RBP9.63□□□□□ -0.87
COL12A1-203ENST00000416123 C11orf54Q9H0W9 315 aaPredicted RBP9.63□□□□□ -0.87
COL12A1-203ENST00000416123 BRCA1P38398 1863 aaKnown RBP9.63□□□□□ -0.87
COL12A1-203ENST00000416123 TRGV5A0A0B4J1U4 118 aa9.63□□□□□ -0.87
COL12A1-203ENST00000416123 TRDV1A0A1B0GX56 115 aa9.63□□□□□ -0.87
COL12A1-203ENST00000416123 FAM90A27PA6NNH2 459 aa9.63□□□□□ -0.87
COL12A1-203ENST00000416123 PSMB1P20618 241 aaKnown RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms