RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 TMEM201Q5SNT2 666 aa11.73□□□□□ -0.53
SCN1B-202ENST00000415950 KIRREL2Q6UWL6 708 aa11.73□□□□□ -0.53
SCN1B-202ENST00000415950 PRSS41Q7RTY9 318 aa11.73□□□□□ -0.53
SCN1B-202ENST00000415950 C9orf62Q8N4C0 152 aa11.73□□□□□ -0.53
SCN1B-202ENST00000415950 OR2G3Q8NGZ4 309 aa11.73□□□□□ -0.53
SCN1B-202ENST00000415950 TINAGL1Q9GZM7 467 aaPredicted RBP11.73□□□□□ -0.53
SCN1B-202ENST00000415950 TRIM77I1YAP6 450 aa11.73□□□□□ -0.53
SCN1B-202ENST00000415950 TLE4Q04727 773 aa11.73□□□□□ -0.53
SCN1B-202ENST00000415950 GSG1Q2KHT4 349 aa11.73□□□□□ -0.53
SCN1B-202ENST00000415950 LSMEM1Q8N8F7 131 aa11.73□□□□□ -0.53
SCN1B-202ENST00000415950 SPTAN1Q13813 2472 aaKnown RBP11.73□□□□□ -0.53
SCN1B-202ENST00000415950 TRAV36DV7A0A075B6V5 113 aa11.73□□□□□ -0.53
SCN1B-202ENST00000415950 A0A087WV62 115 aa11.73□□□□□ -0.53
SCN1B-202ENST00000415950 PRAMEF25A6NGN4 478 aa11.73□□□□□ -0.53
SCN1B-202ENST00000415950 GUSBP08236 651 aa11.73□□□□□ -0.53
SCN1B-202ENST00000415950 TMEM11P17152 192 aa11.73□□□□□ -0.53
SCN1B-202ENST00000415950 CSRP3P50461 194 aa11.73□□□□□ -0.53
SCN1B-202ENST00000415950 HABP2Q14520 560 aaPredicted RBP11.73□□□□□ -0.53
SCN1B-202ENST00000415950 CLPPQ16740 277 aaPredicted RBP11.73□□□□□ -0.53
SCN1B-202ENST00000415950 CLLU1Q5K131 121 aa11.73□□□□□ -0.53
SCN1B-202ENST00000415950 GOT1L1Q8NHS2 421 aaPredicted RBP11.73□□□□□ -0.53
SCN1B-202ENST00000415950 NANPQ8TBE9 248 aa11.73□□□□□ -0.53
SCN1B-202ENST00000415950 DAZAP1Q96EP5 407 aaKnown RBP11.73□□□□□ -0.53
SCN1B-202ENST00000415950 OSGIN2Q9Y236 505 aa11.73□□□□□ -0.53
SCN1B-202ENST00000415950 ETV7Q9Y603 341 aa11.73□□□□□ -0.53
SCN1B-202ENST00000415950 LY75O60449 1722 aa11.73□□□□□ -0.53
SCN1B-202ENST00000415950 MED19A0JLT2 244 aaPredicted RBP11.72□□□□□ -0.53
SCN1B-202ENST00000415950 LAMTOR5O43504 91 aa11.72□□□□□ -0.53
SCN1B-202ENST00000415950 AKR7A3O95154 331 aa11.72□□□□□ -0.53
SCN1B-202ENST00000415950 ABHD16AO95870 558 aa11.72□□□□□ -0.53
SCN1B-202ENST00000415950 EMDP50402 254 aa11.72□□□□□ -0.53
SCN1B-202ENST00000415950 GPR85P60893 370 aa11.72□□□□□ -0.53
SCN1B-202ENST00000415950 ACTBL2Q562R1 376 aa11.72□□□□□ -0.53
SCN1B-202ENST00000415950 ZNF684Q5T5D7 378 aa11.72□□□□□ -0.53
SCN1B-202ENST00000415950 TMEM71Q6P5X7 295 aa11.72□□□□□ -0.53
SCN1B-202ENST00000415950 ZNF547Q8IVP9 402 aa11.72□□□□□ -0.53
SCN1B-202ENST00000415950 CDH26Q8IXH8 852 aa11.72□□□□□ -0.53
SCN1B-202ENST00000415950 GABRG1Q8N1C3 465 aa11.72□□□□□ -0.53
SCN1B-202ENST00000415950 ZNF610Q8N9Z0 462 aa11.72□□□□□ -0.53
SCN1B-202ENST00000415950 LCORQ96JN0 433 aaPredicted RBP11.72□□□□□ -0.53
SCN1B-202ENST00000415950 SUSD2Q9UGT4 822 aa11.72□□□□□ -0.53
SCN1B-202ENST00000415950 SIRT4Q9Y6E7 314 aaPredicted RBP11.72□□□□□ -0.53
SCN1B-202ENST00000415950 DCTN6O00399 190 aa11.72□□□□□ -0.53
SCN1B-202ENST00000415950 ZNF217O75362 1048 aa11.72□□□□□ -0.53
SCN1B-202ENST00000415950 MYOGP15173 224 aa11.72□□□□□ -0.53
SCN1B-202ENST00000415950 CTGFP29279 349 aa11.72□□□□□ -0.53
SCN1B-202ENST00000415950 DIO1P49895 249 aa11.72□□□□□ -0.53
SCN1B-202ENST00000415950 Q5BKY6 102 aa11.72□□□□□ -0.53
SCN1B-202ENST00000415950 NKAIN2Q5VXU1 208 aa11.72□□□□□ -0.53
SCN1B-202ENST00000415950 TMEM182Q6ZP80 229 aaPredicted RBP11.72□□□□□ -0.53
SCN1B-202ENST00000415950 SFTPA1Q8IWL2 248 aa11.72□□□□□ -0.53
SCN1B-202ENST00000415950 LINC01555Q8NAE3 123 aa11.72□□□□□ -0.53
SCN1B-202ENST00000415950 DUSP18Q8NEJ0 188 aa11.72□□□□□ -0.53
SCN1B-202ENST00000415950 TVP23CQ96ET8 276 aa11.72□□□□□ -0.53
SCN1B-202ENST00000415950 EPHX3Q9H6B9 360 aa11.72□□□□□ -0.53
SCN1B-202ENST00000415950 FGF21Q9NSA1 209 aa11.72□□□□□ -0.53
SCN1B-202ENST00000415950 GDE1Q9NZC3 331 aa11.72□□□□□ -0.53
SCN1B-202ENST00000415950 RAB22AQ9UL26 194 aa11.72□□□□□ -0.53
SCN1B-202ENST00000415950 SCML1Q9UN30 329 aa11.72□□□□□ -0.53
SCN1B-202ENST00000415950 SRPK3Q9UPE1 567 aa11.72□□□□□ -0.53
SCN1B-202ENST00000415950 WIF1Q9Y5W5 379 aa11.72□□□□□ -0.53
SCN1B-202ENST00000415950 SHANK3Q9BYB0 1731 aa11.72□□□□□ -0.53
SCN1B-202ENST00000415950 SPTBN1Q01082 2364 aaKnown RBP11.72□□□□□ -0.53
SCN1B-202ENST00000415950 NSG1A0A0A6YYJ2 146 aa11.72□□□□□ -0.53
SCN1B-202ENST00000415950 PLSCR5A0PG75 271 aa11.72□□□□□ -0.53
SCN1B-202ENST00000415950 CYTIPO60759 359 aa11.72□□□□□ -0.53
SCN1B-202ENST00000415950 CFDP00746 253 aaPredicted RBP11.72□□□□□ -0.53
SCN1B-202ENST00000415950 HBE1P02100 147 aa11.72□□□□□ -0.53
SCN1B-202ENST00000415950 OR4E1P0C645 316 aa11.72□□□□□ -0.53
SCN1B-202ENST00000415950 NAGAP17050 411 aa11.72□□□□□ -0.53
SCN1B-202ENST00000415950 PTBP1P26599 531 aaKnown RBP eCLIP11.72□□□□□ -0.53
SCN1B-202ENST00000415950 CD38P28907 300 aa11.72□□□□□ -0.53
SCN1B-202ENST00000415950 FOLR3P41439 243 aa11.72□□□□□ -0.53
SCN1B-202ENST00000415950 GABREP78334 506 aa11.72□□□□□ -0.53
SCN1B-202ENST00000415950 TUSC1Q2TAM9 212 aa11.72□□□□□ -0.53
SCN1B-202ENST00000415950 LCN15Q6UWW0 184 aa11.72□□□□□ -0.53
SCN1B-202ENST00000415950 Q6ZNB5 142 aa11.72□□□□□ -0.53
SCN1B-202ENST00000415950 C19orf47Q8N9M1 422 aaKnown RBP11.72□□□□□ -0.53
SCN1B-202ENST00000415950 UQCC2Q9BRT2 126 aa11.72□□□□□ -0.53
SCN1B-202ENST00000415950 ABHD6Q9BV23 337 aa11.72□□□□□ -0.53
SCN1B-202ENST00000415950 SIRT3Q9NTG7 399 aaPredicted RBP11.72□□□□□ -0.53
SCN1B-202ENST00000415950 IGLV3-16A0A075B6K0 115 aa11.72□□□□□ -0.53
SCN1B-202ENST00000415950 TGFBR3Q03167 851 aa11.72□□□□□ -0.53
SCN1B-202ENST00000415950 SEZ6L2Q6UXD5 910 aa11.72□□□□□ -0.53
SCN1B-202ENST00000415950 PGAP1Q75T13 922 aa11.72□□□□□ -0.53
SCN1B-202ENST00000415950 ZNF784Q8NCA9 323 aaPredicted RBP11.72□□□□□ -0.53
SCN1B-202ENST00000415950 TPPP3Q9BW30 176 aa11.72□□□□□ -0.53
SCN1B-202ENST00000415950 FN3KRPQ9HA64 309 aa11.72□□□□□ -0.53
SCN1B-202ENST00000415950 NCOR1O75376 2440 aa11.72□□□□□ -0.53
SCN1B-202ENST00000415950 LOC107986453A0A1B0GWG9 222 aa11.71□□□□□ -0.53
SCN1B-202ENST00000415950 SLC35E2P0CK97 266 aa11.71□□□□□ -0.53
SCN1B-202ENST00000415950 RBMS3Q6XE24 437 aaKnown RBP11.71□□□□□ -0.53
SCN1B-202ENST00000415950 NECAP1Q8NC96 275 aa11.71□□□□□ -0.53
SCN1B-202ENST00000415950 OR4C3Q8NH37 302 aa11.71□□□□□ -0.53
SCN1B-202ENST00000415950 TXN2Q99757 166 aa11.71□□□□□ -0.53
SCN1B-202ENST00000415950 ADAM19Q9H013 955 aa11.71□□□□□ -0.53
SCN1B-202ENST00000415950 SLCO5A1Q9H2Y9 848 aa11.71□□□□□ -0.53
SCN1B-202ENST00000415950 NTMQ9P121 344 aa11.71□□□□□ -0.53
SCN1B-202ENST00000415950 FOCADQ5VW36 1801 aa11.71□□□□□ -0.53
SCN1B-202ENST00000415950 ARRDC5A6NEK1 342 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms