RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 AP3S1Q92572 193 aa13.71□□□□□ -0.21
SHMT2-202ENST00000414700 NSMAFQ92636 917 aa13.71□□□□□ -0.21
SHMT2-202ENST00000414700 ADAD1Q96M93 576 aaKnown RBP13.71□□□□□ -0.21
SHMT2-202ENST00000414700 PPIL3Q9H2H8 161 aaKnown RBP13.71□□□□□ -0.21
SHMT2-202ENST00000414700 BCO1Q9HAY6 547 aa13.71□□□□□ -0.21
SHMT2-202ENST00000414700 ADGRL4Q9HBW9 690 aa13.71□□□□□ -0.21
SHMT2-202ENST00000414700 COQ3Q9NZJ6 369 aa13.71□□□□□ -0.21
SHMT2-202ENST00000414700 FOXD3Q9UJU5 478 aaPredicted RBP13.71□□□□□ -0.21
SHMT2-202ENST00000414700 ZNF175Q9Y473 711 aa13.71□□□□□ -0.21
SHMT2-202ENST00000414700 TVP23AA6NH52 213 aa13.71□□□□□ -0.22
SHMT2-202ENST00000414700 GLCEO94923 617 aa13.71□□□□□ -0.22
SHMT2-202ENST00000414700 MPZL1O95297 269 aa13.71□□□□□ -0.22
SHMT2-202ENST00000414700 NAA10P41227 235 aaPredicted RBP13.71□□□□□ -0.22
SHMT2-202ENST00000414700 RPS27P42677 84 aaKnown RBP13.71□□□□□ -0.22
SHMT2-202ENST00000414700 PPP3R1P63098 170 aa13.71□□□□□ -0.22
SHMT2-202ENST00000414700 GALEQ14376 348 aa13.71□□□□□ -0.22
SHMT2-202ENST00000414700 RNPS1Q15287 305 aaKnown RBP13.71□□□□□ -0.22
SHMT2-202ENST00000414700 AANATQ16613 207 aa13.71□□□□□ -0.22
SHMT2-202ENST00000414700 SEM1Q6ZVN7 128 aa13.71□□□□□ -0.22
SHMT2-202ENST00000414700 AAED1Q7RTV5 226 aa13.71□□□□□ -0.22
SHMT2-202ENST00000414700 C9orf106Q8NAJ2 232 aa13.71□□□□□ -0.22
SHMT2-202ENST00000414700 OR2T4Q8NH00 348 aa13.71□□□□□ -0.22
SHMT2-202ENST00000414700 MCHR2Q969V1 340 aa13.71□□□□□ -0.22
SHMT2-202ENST00000414700 ZNF837Q96EG3 531 aaPredicted RBP13.71□□□□□ -0.22
SHMT2-202ENST00000414700 MED18Q9BUE0 208 aa13.71□□□□□ -0.22
SHMT2-202ENST00000414700 MRPS18AQ9NVS2 196 aaKnown RBP13.71□□□□□ -0.22
SHMT2-202ENST00000414700 NLKQ9UBE8 527 aa13.71□□□□□ -0.22
SHMT2-202ENST00000414700 ING4Q9UNL4 249 aa13.71□□□□□ -0.22
SHMT2-202ENST00000414700 COA3Q9Y2R0 106 aaPredicted RBP13.71□□□□□ -0.22
SHMT2-202ENST00000414700 NOSIPQ9Y314 301 aaKnown RBP13.71□□□□□ -0.22
SHMT2-202ENST00000414700 FAM215AQ9Y5M1 114 aa13.71□□□□□ -0.22
SHMT2-202ENST00000414700 FKBP7Q9Y680 259 aa13.71□□□□□ -0.22
SHMT2-202ENST00000414700 AHRRA9YTQ3 701 aa13.7□□□□□ -0.22
SHMT2-202ENST00000414700 SELENOFO60613 162 aa13.7□□□□□ -0.22
SHMT2-202ENST00000414700 UPK3AO75631 287 aa13.7□□□□□ -0.22
SHMT2-202ENST00000414700 RAF1P04049 648 aa13.7□□□□□ -0.22
SHMT2-202ENST00000414700 QDPRP09417 244 aa13.7□□□□□ -0.22
SHMT2-202ENST00000414700 ABOP16442 354 aa13.7□□□□□ -0.22
SHMT2-202ENST00000414700 SDC2P34741 201 aa13.7□□□□□ -0.22
SHMT2-202ENST00000414700 CENPAP49450 140 aa13.7□□□□□ -0.22
SHMT2-202ENST00000414700 MEP1BQ16820 701 aa13.7□□□□□ -0.22
SHMT2-202ENST00000414700 GFRALQ6UXV0 394 aa13.7□□□□□ -0.22
SHMT2-202ENST00000414700 LINGO2Q7L985 606 aa13.7□□□□□ -0.22
SHMT2-202ENST00000414700 NUFIP2Q7Z417 695 aaKnown RBP13.7□□□□□ -0.22
SHMT2-202ENST00000414700 P4HA3Q7Z4N8 544 aa13.7□□□□□ -0.22
SHMT2-202ENST00000414700 Q8N402 240 aa13.7□□□□□ -0.22
SHMT2-202ENST00000414700 ALKBH3Q96Q83 286 aaPredicted RBP13.7□□□□□ -0.22
SHMT2-202ENST00000414700 TBX5Q99593 518 aa13.7□□□□□ -0.22
SHMT2-202ENST00000414700 TM9SF2Q99805 663 aa13.7□□□□□ -0.22
SHMT2-202ENST00000414700 WDR76Q9H967 626 aa13.7□□□□□ -0.22
SHMT2-202ENST00000414700 TXNL4BQ9NX01 149 aaKnown RBP13.7□□□□□ -0.22
SHMT2-202ENST00000414700 RTTNQ86VV8 2226 aa13.7□□□□□ -0.22
SHMT2-202ENST00000414700 TFP02787 698 aa13.69□□□□□ -0.22
SHMT2-202ENST00000414700 SBK2P0C263 348 aa13.69□□□□□ -0.22
SHMT2-202ENST00000414700 CLEC2LP0C7M8 214 aa13.69□□□□□ -0.22
SHMT2-202ENST00000414700 SFTPCP11686 197 aa13.69□□□□□ -0.22
SHMT2-202ENST00000414700 PTBP1P26599 531 aaKnown RBP eCLIP13.69□□□□□ -0.22
SHMT2-202ENST00000414700 CSNK1A1P48729 337 aa13.69□□□□□ -0.22
SHMT2-202ENST00000414700 RIPPLY1Q0D2K3 151 aa13.69□□□□□ -0.22
SHMT2-202ENST00000414700 RAB40BQ12829 278 aa13.69□□□□□ -0.22
SHMT2-202ENST00000414700 CLLU1Q5K131 121 aa13.69□□□□□ -0.22
SHMT2-202ENST00000414700 THEM4Q5T1C6 240 aa13.69□□□□□ -0.22
SHMT2-202ENST00000414700 RNLSQ5VYX0 342 aa13.69□□□□□ -0.22
SHMT2-202ENST00000414700 METAP1DQ6UB28 335 aaPredicted RBP13.69□□□□□ -0.22
SHMT2-202ENST00000414700 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.69□□□□□ -0.22
SHMT2-202ENST00000414700 MCEMP1Q8IX19 187 aa13.69□□□□□ -0.22
SHMT2-202ENST00000414700 RFLNBQ8N5W9 214 aa13.69□□□□□ -0.22
SHMT2-202ENST00000414700 OR6N1Q8NGY5 312 aa13.69□□□□□ -0.22
SHMT2-202ENST00000414700 FAM57AQ8TBR7 257 aa13.69□□□□□ -0.22
SHMT2-202ENST00000414700 ZNF431Q8TF32 576 aaPredicted RBP13.69□□□□□ -0.22
SHMT2-202ENST00000414700 CREB3L1Q96BA8 519 aa13.69□□□□□ -0.22
SHMT2-202ENST00000414700 RBP7Q96R05 134 aa13.69□□□□□ -0.22
SHMT2-202ENST00000414700 SOSTQ9BQB4 213 aa13.69□□□□□ -0.22
SHMT2-202ENST00000414700 PPA2Q9H2U2 334 aa13.69□□□□□ -0.22
SHMT2-202ENST00000414700 PTTG3PQ9NZH4 202 aa13.69□□□□□ -0.22
SHMT2-202ENST00000414700 ZNF224Q9NZL3 707 aa13.69□□□□□ -0.22
SHMT2-202ENST00000414700 CLEC2DQ9UHP7 191 aa13.69□□□□□ -0.22
SHMT2-202ENST00000414700 RCE1Q9Y256 329 aa13.69□□□□□ -0.22
SHMT2-202ENST00000414700 INMT-MINDY4F8WBC2 141 aa13.69□□□□□ -0.22
SHMT2-202ENST00000414700 J3QRE1 110 aa13.69□□□□□ -0.22
SHMT2-202ENST00000414700 APEX1P27695 318 aaKnown RBP13.69□□□□□ -0.22
SHMT2-202ENST00000414700 AGTR1P30556 359 aa13.69□□□□□ -0.22
SHMT2-202ENST00000414700 CDAP32320 146 aa13.69□□□□□ -0.22
SHMT2-202ENST00000414700 ATP6V1E1P36543 226 aa13.69□□□□□ -0.22
SHMT2-202ENST00000414700 BTG1P62324 171 aa13.69□□□□□ -0.22
SHMT2-202ENST00000414700 RIN1Q13671 783 aa13.69□□□□□ -0.22
SHMT2-202ENST00000414700 SLC35D3Q5M8T2 416 aa13.69□□□□□ -0.22
SHMT2-202ENST00000414700 PHC2Q8IXK0 858 aa13.69□□□□□ -0.22
SHMT2-202ENST00000414700 NANOGP1Q8N7R0 232 aa13.69□□□□□ -0.22
SHMT2-202ENST00000414700 TMEM54Q969K7 222 aa13.69□□□□□ -0.22
SHMT2-202ENST00000414700 RANBP3Q9H6Z4 567 aaPredicted RBP13.69□□□□□ -0.22
SHMT2-202ENST00000414700 C12orf49Q9H741 205 aa13.69□□□□□ -0.22
SHMT2-202ENST00000414700 PPP1R3EQ9H7J1 279 aa13.69□□□□□ -0.22
SHMT2-202ENST00000414700 MRPL22Q9NWU5 206 aaKnown RBP13.69□□□□□ -0.22
SHMT2-202ENST00000414700 HAO2Q9NYQ3 351 aa13.69□□□□□ -0.22
SHMT2-202ENST00000414700 EMC3Q9P0I2 261 aa13.69□□□□□ -0.22
SHMT2-202ENST00000414700 TINAGQ9UJW2 476 aa13.69□□□□□ -0.22
SHMT2-202ENST00000414700 EXOGQ9Y2C4 368 aaKnown RBP13.69□□□□□ -0.22
SHMT2-202ENST00000414700 ADGRG4Q8IZF6 3080 aa13.69□□□□□ -0.22
SHMT2-202ENST00000414700 ZNF724A8MTY0 619 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms