RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 DGUOKQ16854 277 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 DMRTC1Q5HYR2 192 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 PDZK1Q5T2W1 519 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 ZNF691Q5VV52 312 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 ANKRD22Q5VYY1 191 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 PMF1Q6P1K2 205 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 DNAJC24Q6P3W2 148 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 LRRC31Q6UY01 552 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 CLEC20AQ6ZU45 233 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 LINC01551Q86U37 167 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 IFT20Q8IY31 132 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 PIANPQ8IYJ0 282 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 SAXO1Q8IYX7 474 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 PQLC3Q8N755 202 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 C12orf29Q8N999 325 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 TMEM35BQ8NCS4 154 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 IPMKQ8NFU5 416 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 VN1R2Q8NFZ6 395 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 OR1N2Q8NGR9 330 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 UBA3Q8TBC4 463 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 UBE2Q2Q8WVN8 375 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 TMEM158Q8WZ71 300 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 HAUS1Q96CS2 278 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 CXorf40BQ96DE9 158 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 SLC41A3Q96GZ6 507 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 ANKRD36BP1Q96IX9 119 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 ATP6V1G3Q96LB4 118 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 OLFM3Q96PB7 478 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 FMO2Q99518 471 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 TMEM43Q9BTV4 400 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 SNRNP25Q9BV90 132 aaKnown RBP2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 TMEM109Q9BVC6 243 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 GPR61Q9BZJ8 451 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 NIPAL2Q9H841 368 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 FAM49BQ9NUQ9 324 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 GPATCH2LQ9NWQ4 482 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 XCL2Q9UBD3 114 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 LGALS13Q9UHV8 139 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 PTBP2Q9UKA9 531 aaKnown RBP2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 ADAM28Q9UKQ2 775 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 Q9Y3F1 56 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 DOCK6Q96HP0 2047 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 C15orf38-AP3S2A0A0A6YYH1 394 aa2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 OR5B21A6NL26 309 aa2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 GOLGA8KD6RF30 607 aa2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 TMX2-CTNND1H3BSU7 103 aa2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 I3L4J1 428 aa2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 PEX7O00628 323 aa2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 DLGAP1O14490 977 aa2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 DNALI1O14645 258 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 SS18L1O75177 396 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 WISP3O95389 354 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 HPGDP15428 266 aa2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 KDELR1P24390 212 aa2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 HOXA9P31269 272 aa2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 RPL22P35268 128 aaKnown RBP2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 PCK1P35558 622 aa2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 SLC26A3P40879 764 aa2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 MAGEA3P43357 314 aa2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 MAGEA6P43360 314 aa2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 GPX6P59796 221 aa2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 PFN3P60673 137 aa2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 YWHAEP62258 255 aaKnown RBP2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 CDK16Q00536 496 aa2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 FGL1Q08830 312 aa2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 GPM6BQ13491 265 aa2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 PIGHQ14442 188 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 GNMTQ14749 295 aa2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 C16orf72Q14CZ0 275 aa2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 TRIP13Q15645 432 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 RFX4Q33E94 735 aa2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 CLLU1OSQ5K130 101 aa2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 KCTD16Q68DU8 428 aa2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 NCBP2-AS2Q69YL0 99 aa2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 UNC93AQ86WB7 457 aa2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 NUDCD3Q8IVD9 361 aa2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 LRRC75A-AS1Q8N1F1 130 aa2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 NPWQ8N729 165 aa2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 UBL4BQ8N7F7 174 aa2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 FNDC5Q8NAU1 212 aa2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 FAM83FQ8NEG4 500 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 OR5D13Q8NGL4 314 aa2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 OR2G3Q8NGZ4 309 aa2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 ACTL9Q8TC94 416 aa2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 DTX3LQ8TDB6 740 aa2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 RXFP2Q8WXD0 754 aa2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 RSPH1Q8WYR4 309 aa2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 NT5C3BQ969T7 300 aa2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 MAGOHBQ96A72 148 aaKnown RBP2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 STARD4Q96DR4 205 aa2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 SNF8Q96H20 258 aa2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 RPRD1AQ96P16 312 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 ZNF317Q96PQ6 595 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 QKIQ96PU8 341 aaKnown RBP eCLIP2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 NPY6RQ99463 290 aa2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 MTG1Q9BT17 334 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 TCHPQ9BT92 498 aa2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 FAIM2Q9BWQ8 316 aa2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 GCOM2Q9BZD3 368 aaPredicted RBP2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms