RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 ARRDC5A6NEK1 342 aa12.62□□□□□ -0.39
LIMS4-201ENST00000413601 TVP23AA6NH52 213 aa12.62□□□□□ -0.39
LIMS4-201ENST00000413601 ZSCAN5BA6NJL1 495 aa12.62□□□□□ -0.39
LIMS4-201ENST00000413601 TPD52L2O43399 206 aaKnown RBP12.62□□□□□ -0.39
LIMS4-201ENST00000413601 SPRY3O43610 288 aa12.62□□□□□ -0.39
LIMS4-201ENST00000413601 TIMM8AO60220 97 aaPredicted RBP12.62□□□□□ -0.39
LIMS4-201ENST00000413601 E2F6O75461 281 aa12.62□□□□□ -0.39
LIMS4-201ENST00000413601 CRLF1O75462 422 aa12.62□□□□□ -0.39
LIMS4-201ENST00000413601 GYPBP06028 91 aa12.62□□□□□ -0.39
LIMS4-201ENST00000413601 TACSTD2P09758 323 aa12.62□□□□□ -0.39
LIMS4-201ENST00000413601 IL2RGP31785 369 aa12.62□□□□□ -0.39
LIMS4-201ENST00000413601 GZMKP49863 264 aa12.62□□□□□ -0.39
LIMS4-201ENST00000413601 CHN2P52757 468 aa12.62□□□□□ -0.39
LIMS4-201ENST00000413601 CRMP1Q14194 572 aa12.62□□□□□ -0.39
LIMS4-201ENST00000413601 LYPD4Q6UWN0 246 aa12.62□□□□□ -0.39
LIMS4-201ENST00000413601 PAPD5Q8NDF8 572 aaKnown RBP12.62□□□□□ -0.39
LIMS4-201ENST00000413601 OR2AJ1Q8NGZ0 328 aa12.62□□□□□ -0.39
LIMS4-201ENST00000413601 TEX47Q8TBZ9 253 aa12.62□□□□□ -0.39
LIMS4-201ENST00000413601 COQ7Q99807 217 aa12.62□□□□□ -0.39
LIMS4-201ENST00000413601 SOX7Q9BT81 388 aa12.62□□□□□ -0.39
LIMS4-201ENST00000413601 RBM4Q9BWF3 364 aaKnown RBP12.62□□□□□ -0.39
LIMS4-201ENST00000413601 HDHD2Q9H0R4 259 aa12.62□□□□□ -0.39
LIMS4-201ENST00000413601 YY1AP1Q9H869 796 aa12.62□□□□□ -0.39
LIMS4-201ENST00000413601 DECR2Q9NUI1 292 aa12.62□□□□□ -0.39
LIMS4-201ENST00000413601 CYB5R1Q9UHQ9 305 aa12.62□□□□□ -0.39
LIMS4-201ENST00000413601 ATPIF1Q9UII2 106 aa12.62□□□□□ -0.39
LIMS4-201ENST00000413601 KLHL21Q9UJP4 597 aa12.62□□□□□ -0.39
LIMS4-201ENST00000413601 NAV3Q8IVL0 2385 aa12.61□□□□□ -0.39
LIMS4-201ENST00000413601 H3BN98 237 aa12.61□□□□□ -0.39
LIMS4-201ENST00000413601 RP2O75695 350 aa12.61□□□□□ -0.39
LIMS4-201ENST00000413601 ATP5HO75947 161 aa12.61□□□□□ -0.39
LIMS4-201ENST00000413601 IGHV1-46P01743 117 aa12.61□□□□□ -0.39
LIMS4-201ENST00000413601 ZNF823P16415 610 aa12.61□□□□□ -0.39
LIMS4-201ENST00000413601 PRKACGP22612 351 aa12.61□□□□□ -0.39
LIMS4-201ENST00000413601 TUBG1P23258 451 aa12.61□□□□□ -0.39
LIMS4-201ENST00000413601 RPS27P42677 84 aaKnown RBP12.61□□□□□ -0.39
LIMS4-201ENST00000413601 GPR6P46095 362 aaPredicted RBP12.61□□□□□ -0.39
LIMS4-201ENST00000413601 RASSF2P50749 326 aa12.61□□□□□ -0.39
LIMS4-201ENST00000413601 MRPS11P82912 194 aaKnown RBP12.61□□□□□ -0.39
LIMS4-201ENST00000413601 RSPO1Q2MKA7 263 aaPredicted RBP12.61□□□□□ -0.39
LIMS4-201ENST00000413601 KRTAP21-3Q3LHN1 58 aa12.61□□□□□ -0.39
LIMS4-201ENST00000413601 IQCF1Q8N6M8 205 aa12.61□□□□□ -0.39
LIMS4-201ENST00000413601 CMBLQ96DG6 245 aa12.61□□□□□ -0.39
LIMS4-201ENST00000413601 MSI2Q96DH6 328 aaKnown RBP12.61□□□□□ -0.39
LIMS4-201ENST00000413601 DCLRE1CQ96SD1 692 aaKnown RBP12.61□□□□□ -0.39
LIMS4-201ENST00000413601 PITX2Q99697 317 aa12.61□□□□□ -0.39
LIMS4-201ENST00000413601 NMNAT2Q9BZQ4 307 aa12.61□□□□□ -0.39
LIMS4-201ENST00000413601 MSL2Q9HCI7 577 aa12.61□□□□□ -0.39
LIMS4-201ENST00000413601 TUBG2Q9NRH3 451 aa12.61□□□□□ -0.39
LIMS4-201ENST00000413601 CYSLTR2Q9NS75 346 aa12.61□□□□□ -0.39
LIMS4-201ENST00000413601 DNAJB9Q9UBS3 223 aa12.61□□□□□ -0.39
LIMS4-201ENST00000413601 SONP18583 2426 aaKnown RBP12.61□□□□□ -0.39
LIMS4-201ENST00000413601 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.6□□□□□ -0.39
LIMS4-201ENST00000413601 IGHV1-69-2A0A0G2JMI3 117 aa12.6□□□□□ -0.39
LIMS4-201ENST00000413601 LOC100289279A0A1B0GTE1 492 aa12.6□□□□□ -0.39
LIMS4-201ENST00000413601 RIIAD1A6NNX1 92 aa12.6□□□□□ -0.39
LIMS4-201ENST00000413601 PPIHO43447 177 aaKnown RBP12.6□□□□□ -0.39
LIMS4-201ENST00000413601 TIPRLO75663 272 aa12.6□□□□□ -0.39
LIMS4-201ENST00000413601 IFNGP01579 166 aa12.6□□□□□ -0.39
LIMS4-201ENST00000413601 CLUP10909 449 aa12.6□□□□□ -0.39
LIMS4-201ENST00000413601 PSKH1P11801 424 aa12.6□□□□□ -0.39
LIMS4-201ENST00000413601 SPI1P17947 270 aa12.6□□□□□ -0.39
LIMS4-201ENST00000413601 POU1F1P28069 291 aa12.6□□□□□ -0.39
LIMS4-201ENST00000413601 LIPAP38571 399 aa12.6□□□□□ -0.39
LIMS4-201ENST00000413601 CRYBB2P43320 205 aa12.6□□□□□ -0.39
LIMS4-201ENST00000413601 TMEM33P57088 247 aa12.6□□□□□ -0.39
LIMS4-201ENST00000413601 HLXQ14774 488 aaPredicted RBP12.6□□□□□ -0.39
LIMS4-201ENST00000413601 USP51Q70EK9 711 aa12.6□□□□□ -0.39
LIMS4-201ENST00000413601 PRIMA1Q86XR5 153 aa12.6□□□□□ -0.39
LIMS4-201ENST00000413601 ZNF511Q8NB15 262 aa12.6□□□□□ -0.39
LIMS4-201ENST00000413601 PTP4A1Q93096 173 aa12.6□□□□□ -0.39
LIMS4-201ENST00000413601 HAVCR1Q96D42 359 aa12.6□□□□□ -0.39
LIMS4-201ENST00000413601 MAP6Q96JE9 813 aa12.6□□□□□ -0.39
LIMS4-201ENST00000413601 COG8Q96MW5 612 aa12.6□□□□□ -0.39
LIMS4-201ENST00000413601 ATF6BQ99941 703 aa12.6□□□□□ -0.39
LIMS4-201ENST00000413601 NARFLQ9H6Q4 476 aa12.6□□□□□ -0.39
LIMS4-201ENST00000413601 WDR76Q9H967 626 aa12.6□□□□□ -0.39
LIMS4-201ENST00000413601 ZNF556Q9HAH1 456 aa12.6□□□□□ -0.39
LIMS4-201ENST00000413601 SAP30LQ9HAJ7 183 aa12.6□□□□□ -0.39
LIMS4-201ENST00000413601 PNRC2Q9NPJ4 139 aaKnown RBP12.6□□□□□ -0.39
LIMS4-201ENST00000413601 PTTG3PQ9NZH4 202 aa12.6□□□□□ -0.39
LIMS4-201ENST00000413601 KCNG2Q9UJ96 466 aa12.6□□□□□ -0.39
LIMS4-201ENST00000413601 PURGQ9UJV8 347 aaKnown RBP12.6□□□□□ -0.39
LIMS4-201ENST00000413601 FAM183AA6NL82 134 aa12.59□□□□□ -0.39
LIMS4-201ENST00000413601 F5H5K5 113 aa12.59□□□□□ -0.39
LIMS4-201ENST00000413601 WNT9BO14905 357 aa12.59□□□□□ -0.39
LIMS4-201ENST00000413601 ZNF3P17036 446 aa12.59□□□□□ -0.39
LIMS4-201ENST00000413601 KITLGP21583 273 aa12.59□□□□□ -0.39
LIMS4-201ENST00000413601 FMO3P31513 532 aa12.59□□□□□ -0.39
LIMS4-201ENST00000413601 GRK5P34947 590 aa12.59□□□□□ -0.39
LIMS4-201ENST00000413601 RGS6P49758 472 aa12.59□□□□□ -0.39
LIMS4-201ENST00000413601 SLC25A1P53007 311 aa12.59□□□□□ -0.39
LIMS4-201ENST00000413601 ECH1Q13011 328 aa12.59□□□□□ -0.39
LIMS4-201ENST00000413601 CCNIQ14094 377 aa12.59□□□□□ -0.39
LIMS4-201ENST00000413601 KRTAP27-1Q3LI81 207 aa12.59□□□□□ -0.39
LIMS4-201ENST00000413601 SPRNQ5BIV9 151 aa12.59□□□□□ -0.39
LIMS4-201ENST00000413601 FAM209AQ5JX71 171 aa12.59□□□□□ -0.39
LIMS4-201ENST00000413601 FAM166AQ6J272 317 aa12.59□□□□□ -0.39
LIMS4-201ENST00000413601 ACSM5Q6NUN0 579 aa12.59□□□□□ -0.39
LIMS4-201ENST00000413601 NAA40Q86UY6 237 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms