RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 CYB5R1Q9UHQ9 305 aa16.07■□□□□ 0.16
TRIM56-202ENST00000412507 ATPIF1Q9UII2 106 aa16.07■□□□□ 0.16
TRIM56-202ENST00000412507 H3BSA7 217 aa16.06■□□□□ 0.16
TRIM56-202ENST00000412507 LILRA1O75019 489 aa16.06■□□□□ 0.16
TRIM56-202ENST00000412507 TIPRLO75663 272 aa16.06■□□□□ 0.16
TRIM56-202ENST00000412507 GYPBP06028 91 aa16.06■□□□□ 0.16
TRIM56-202ENST00000412507 ZNF23P17027 643 aa16.06■□□□□ 0.16
TRIM56-202ENST00000412507 PRKACGP22612 351 aa16.06■□□□□ 0.16
TRIM56-202ENST00000412507 GGT2P36268 569 aa16.06■□□□□ 0.16
TRIM56-202ENST00000412507 ZNF81P51508 661 aa16.06■□□□□ 0.16
TRIM56-202ENST00000412507 MMP15P51511 669 aa16.06■□□□□ 0.16
TRIM56-202ENST00000412507 PSG7Q13046 419 aa16.06■□□□□ 0.16
TRIM56-202ENST00000412507 TRIP10Q15642 601 aa16.06■□□□□ 0.16
TRIM56-202ENST00000412507 PCGF3Q3KNV8 242 aa16.06■□□□□ 0.16
TRIM56-202ENST00000412507 CYB5R2Q6BCY4 276 aa16.06■□□□□ 0.16
TRIM56-202ENST00000412507 LYPD4Q6UWN0 246 aa16.06■□□□□ 0.16
TRIM56-202ENST00000412507 DCLRE1CQ96SD1 692 aaKnown RBP16.06■□□□□ 0.16
TRIM56-202ENST00000412507 COQ7Q99807 217 aa16.06■□□□□ 0.16
TRIM56-202ENST00000412507 CHODLQ9H9P2 273 aa16.06■□□□□ 0.16
TRIM56-202ENST00000412507 NKIRAS2Q9NYR9 191 aa16.06■□□□□ 0.16
TRIM56-202ENST00000412507 PLSCR5A0PG75 271 aa16.05■□□□□ 0.16
TRIM56-202ENST00000412507 LRP5LA4QPB2 252 aa16.05■□□□□ 0.16
TRIM56-202ENST00000412507 ZSCAN5BA6NJL1 495 aa16.05■□□□□ 0.16
TRIM56-202ENST00000412507 TPD52L2O43399 206 aaKnown RBP16.05■□□□□ 0.16
TRIM56-202ENST00000412507 SPRY3O43610 288 aa16.05■□□□□ 0.16
TRIM56-202ENST00000412507 TIMM8AO60220 97 aaPredicted RBP16.05■□□□□ 0.16
TRIM56-202ENST00000412507 CDC14BO60729 498 aa16.05■□□□□ 0.16
TRIM56-202ENST00000412507 IFNGP01579 166 aa16.05■□□□□ 0.16
TRIM56-202ENST00000412507 ZNF823P16415 610 aa16.05■□□□□ 0.16
TRIM56-202ENST00000412507 ZNF16P17020 682 aaPredicted RBP16.05■□□□□ 0.16
TRIM56-202ENST00000412507 ACHEP22303 614 aa16.05■□□□□ 0.16
TRIM56-202ENST00000412507 POU1F1P28069 291 aa16.05■□□□□ 0.16
TRIM56-202ENST00000412507 RPS27P42677 84 aaKnown RBP16.05■□□□□ 0.16
TRIM56-202ENST00000412507 RSPO1Q2MKA7 263 aaPredicted RBP16.05■□□□□ 0.16
TRIM56-202ENST00000412507 C6orf52Q5T4I8 152 aa16.05■□□□□ 0.16
TRIM56-202ENST00000412507 PITX2Q99697 317 aa16.05■□□□□ 0.16
TRIM56-202ENST00000412507 NMNAT2Q9BZQ4 307 aa16.05■□□□□ 0.16
TRIM56-202ENST00000412507 ZNF275Q9NSD4 429 aaPredicted RBP16.05■□□□□ 0.16
TRIM56-202ENST00000412507 KCNG2Q9UJ96 466 aa16.05■□□□□ 0.16
TRIM56-202ENST00000412507 RIIAD1A6NNX1 92 aa16.04■□□□□ 0.16
TRIM56-202ENST00000412507 A8MV72 311 aaPredicted RBP16.04■□□□□ 0.16
TRIM56-202ENST00000412507 IGHV1-46P01743 117 aa16.04■□□□□ 0.16
TRIM56-202ENST00000412507 TACSTD2P09758 323 aa16.04■□□□□ 0.16
TRIM56-202ENST00000412507 CLUP10909 449 aa16.04■□□□□ 0.16
TRIM56-202ENST00000412507 SPI1P17947 270 aa16.04■□□□□ 0.16
TRIM56-202ENST00000412507 TUBG1P23258 451 aa16.04■□□□□ 0.16
TRIM56-202ENST00000412507 GRK5P34947 590 aa16.04■□□□□ 0.16
TRIM56-202ENST00000412507 GPR6P46095 362 aaPredicted RBP16.04■□□□□ 0.16
TRIM56-202ENST00000412507 RGS6P49758 472 aa16.04■□□□□ 0.16
TRIM56-202ENST00000412507 GZMKP49863 264 aa16.04■□□□□ 0.16
TRIM56-202ENST00000412507 SLC25A1P53007 311 aa16.04■□□□□ 0.16
TRIM56-202ENST00000412507 MRPS11P82912 194 aaKnown RBP16.04■□□□□ 0.16
TRIM56-202ENST00000412507 ZNF511Q8NB15 262 aa16.04■□□□□ 0.16
TRIM56-202ENST00000412507 CMBLQ96DG6 245 aa16.04■□□□□ 0.16
TRIM56-202ENST00000412507 MAP6Q96JE9 813 aa16.04■□□□□ 0.16
TRIM56-202ENST00000412507 COG8Q96MW5 612 aa16.04■□□□□ 0.16
TRIM56-202ENST00000412507 MMADHCQ9H3L0 296 aaPredicted RBP16.04■□□□□ 0.16
TRIM56-202ENST00000412507 MED20Q9H944 212 aa16.04■□□□□ 0.16
TRIM56-202ENST00000412507 WDR76Q9H967 626 aa16.04■□□□□ 0.16
TRIM56-202ENST00000412507 ZNF556Q9HAH1 456 aa16.04■□□□□ 0.16
TRIM56-202ENST00000412507 NTN4Q9HB63 628 aa16.04■□□□□ 0.16
TRIM56-202ENST00000412507 MSL2Q9HCI7 577 aa16.04■□□□□ 0.16
TRIM56-202ENST00000412507 PNRC2Q9NPJ4 139 aaKnown RBP16.04■□□□□ 0.16
TRIM56-202ENST00000412507 TUBG2Q9NRH3 451 aa16.04■□□□□ 0.16
TRIM56-202ENST00000412507 CMC2Q9NRP2 79 aa16.04■□□□□ 0.16
TRIM56-202ENST00000412507 CYSLTR2Q9NS75 346 aa16.04■□□□□ 0.16
TRIM56-202ENST00000412507 DECR2Q9NUI1 292 aa16.04■□□□□ 0.16
TRIM56-202ENST00000412507 PTTG3PQ9NZH4 202 aa16.04■□□□□ 0.16
TRIM56-202ENST00000412507 FAM183AA6NL82 134 aa16.03■□□□□ 0.16
TRIM56-202ENST00000412507 EBAG9O00559 213 aa16.03■□□□□ 0.16
TRIM56-202ENST00000412507 RRP9O43818 475 aaKnown RBP16.03■□□□□ 0.16
TRIM56-202ENST00000412507 DEAF1O75398 565 aaPredicted RBP16.03■□□□□ 0.16
TRIM56-202ENST00000412507 RP2O75695 350 aa16.03■□□□□ 0.16
TRIM56-202ENST00000412507 PSKH1P11801 424 aa16.03■□□□□ 0.16
TRIM56-202ENST00000412507 ANXA8P13928 327 aa16.03■□□□□ 0.16
TRIM56-202ENST00000412507 ZNF3P17036 446 aa16.03■□□□□ 0.16
TRIM56-202ENST00000412507 FMO3P31513 532 aa16.03■□□□□ 0.16
TRIM56-202ENST00000412507 IL2RGP31785 369 aa16.03■□□□□ 0.16
TRIM56-202ENST00000412507 LIPAP38571 399 aa16.03■□□□□ 0.16
TRIM56-202ENST00000412507 CRYBB2P43320 205 aa16.03■□□□□ 0.16
TRIM56-202ENST00000412507 CHN2P52757 468 aa16.03■□□□□ 0.16
TRIM56-202ENST00000412507 GINS1Q14691 196 aa16.03■□□□□ 0.16
TRIM56-202ENST00000412507 ACSM5Q6NUN0 579 aa16.03■□□□□ 0.16
TRIM56-202ENST00000412507 SLC27A4Q6P1M0 643 aa16.03■□□□□ 0.16
TRIM56-202ENST00000412507 SHQ1Q6PI26 577 aaKnown RBP16.03■□□□□ 0.16
TRIM56-202ENST00000412507 USP51Q70EK9 711 aa16.03■□□□□ 0.16
TRIM56-202ENST00000412507 ATG16L2Q8NAA4 619 aa16.03■□□□□ 0.16
TRIM56-202ENST00000412507 PTP4A1Q93096 173 aa16.03■□□□□ 0.16
TRIM56-202ENST00000412507 UTP4Q969X6 686 aaKnown RBP16.03■□□□□ 0.16
TRIM56-202ENST00000412507 APOBEC3DQ96AK3 386 aaPredicted RBP16.03■□□□□ 0.16
TRIM56-202ENST00000412507 ATF6BQ99941 703 aa16.03■□□□□ 0.16
TRIM56-202ENST00000412507 SOX7Q9BT81 388 aa16.03■□□□□ 0.16
TRIM56-202ENST00000412507 HCAR1Q9BXC0 346 aa16.03■□□□□ 0.16
TRIM56-202ENST00000412507 SAP30LQ9HAJ7 183 aa16.03■□□□□ 0.16
TRIM56-202ENST00000412507 PURGQ9UJV8 347 aaKnown RBP16.03■□□□□ 0.16
TRIM56-202ENST00000412507 COMMD3-BMI1R4GMX3 469 aa16.03■□□□□ 0.16
TRIM56-202ENST00000412507 IGHV1-69-2A0A0G2JMI3 117 aa16.02■□□□□ 0.16
TRIM56-202ENST00000412507 F5H5K5 113 aa16.02■□□□□ 0.16
TRIM56-202ENST00000412507 J3QW42 95 aa16.02■□□□□ 0.16
TRIM56-202ENST00000412507 PPIHO43447 177 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms