RNA–Protein interactions for RNA: ENST00000411552.5

NOD1-202, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-202ENST00000411552 ZDHHC13Q8IUH4 622 aa13.97□□□□□ -0.17
NOD1-202ENST00000411552 MAPK1IP1LQ8NDC0 245 aa13.97□□□□□ -0.17
NOD1-202ENST00000411552 C10orf105Q8TEF2 133 aa13.97□□□□□ -0.17
NOD1-202ENST00000411552 IPCEF1Q8WWN9 437 aaPredicted RBP13.97□□□□□ -0.17
NOD1-202ENST00000411552 NEU4Q8WWR8 484 aaPredicted RBP13.97□□□□□ -0.17
NOD1-202ENST00000411552 PTP4A1Q93096 173 aa13.97□□□□□ -0.17
NOD1-202ENST00000411552 OTULINQ96BN8 352 aa13.97□□□□□ -0.17
NOD1-202ENST00000411552 CENPNQ96H22 339 aaPredicted RBP13.97□□□□□ -0.17
NOD1-202ENST00000411552 MAP6Q96JE9 813 aa13.97□□□□□ -0.17
NOD1-202ENST00000411552 PITX2Q99697 317 aa13.97□□□□□ -0.17
NOD1-202ENST00000411552 MS4A5Q9H3V2 200 aa13.97□□□□□ -0.17
NOD1-202ENST00000411552 POFUT1Q9H488 388 aa13.97□□□□□ -0.17
NOD1-202ENST00000411552 PNRC2Q9NPJ4 139 aaKnown RBP13.97□□□□□ -0.17
NOD1-202ENST00000411552 KRT84Q9NSB2 600 aa13.97□□□□□ -0.17
NOD1-202ENST00000411552 SLCO1C1Q9NYB5 712 aa13.97□□□□□ -0.17
NOD1-202ENST00000411552 SETD2Q9BYW2 2564 aaPredicted RBP13.97□□□□□ -0.17
NOD1-202ENST00000411552 H3BNX3 289 aa13.96□□□□□ -0.17
NOD1-202ENST00000411552 H3BSA7 217 aa13.96□□□□□ -0.17
NOD1-202ENST00000411552 MITFO75030 526 aaPredicted RBP13.96□□□□□ -0.17
NOD1-202ENST00000411552 ENTPD1P49961 510 aa13.96□□□□□ -0.17
NOD1-202ENST00000411552 PDLIM4P50479 330 aa13.96□□□□□ -0.17
NOD1-202ENST00000411552 RSPO1Q2MKA7 263 aaPredicted RBP13.96□□□□□ -0.17
NOD1-202ENST00000411552 KRTAP27-1Q3LI81 207 aa13.96□□□□□ -0.17
NOD1-202ENST00000411552 KDM4DQ6B0I6 523 aa13.96□□□□□ -0.17
NOD1-202ENST00000411552 PLBD1Q6P4A8 553 aa13.96□□□□□ -0.17
NOD1-202ENST00000411552 OR10S1Q8NGN2 331 aa13.96□□□□□ -0.17
NOD1-202ENST00000411552 GTF3AQ92664 365 aaKnown RBP13.96□□□□□ -0.17
NOD1-202ENST00000411552 DCLRE1CQ96SD1 692 aaKnown RBP13.96□□□□□ -0.17
NOD1-202ENST00000411552 ATF6BQ99941 703 aa13.96□□□□□ -0.17
NOD1-202ENST00000411552 GPR160Q9UJ42 338 aa13.96□□□□□ -0.17
NOD1-202ENST00000411552 OAZ3Q9UMX2 235 aa13.96□□□□□ -0.17
NOD1-202ENST00000411552 STARD10Q9Y365 291 aa13.96□□□□□ -0.17
NOD1-202ENST00000411552 NIPBLQ6KC79 2804 aaeCLIP13.95□□□□□ -0.18
NOD1-202ENST00000411552 PRR23D1E9PI22 279 aaPredicted RBP13.95□□□□□ -0.18
NOD1-202ENST00000411552 SPARCP09486 303 aa13.95□□□□□ -0.18
NOD1-202ENST00000411552 PRR23D2P0DMB1 279 aaPredicted RBP13.95□□□□□ -0.18
NOD1-202ENST00000411552 DAOP14920 347 aa13.95□□□□□ -0.18
NOD1-202ENST00000411552 BLVRAP53004 296 aa13.95□□□□□ -0.18
NOD1-202ENST00000411552 ESRRGP62508 458 aa13.95□□□□□ -0.18
NOD1-202ENST00000411552 ECH1Q13011 328 aa13.95□□□□□ -0.18
NOD1-202ENST00000411552 PTGES3Q15185 160 aaKnown RBP13.95□□□□□ -0.18
NOD1-202ENST00000411552 CARTPTQ16568 116 aa13.95□□□□□ -0.18
NOD1-202ENST00000411552 PCK2Q16822 640 aa13.95□□□□□ -0.18
NOD1-202ENST00000411552 ZFP1Q6P2D0 407 aa13.95□□□□□ -0.18
NOD1-202ENST00000411552 CPOQ8IVL8 374 aa13.95□□□□□ -0.18
NOD1-202ENST00000411552 SNX33Q8WV41 574 aa13.95□□□□□ -0.18
NOD1-202ENST00000411552 PLEKHA8Q96JA3 519 aa13.95□□□□□ -0.18
NOD1-202ENST00000411552 RAB3IPQ96QF0 476 aaPredicted RBP13.95□□□□□ -0.18
NOD1-202ENST00000411552 PKP2Q99959 881 aa13.95□□□□□ -0.18
NOD1-202ENST00000411552 TEX12Q9BXU0 123 aa13.95□□□□□ -0.18
NOD1-202ENST00000411552 OR51V1Q9H2C8 321 aa13.95□□□□□ -0.18
NOD1-202ENST00000411552 MYOZ1Q9NP98 299 aaPredicted RBP13.95□□□□□ -0.18
NOD1-202ENST00000411552 HINT3Q9NQE9 182 aaKnown RBP13.95□□□□□ -0.18
NOD1-202ENST00000411552 ABCA1O95477 2261 aa13.95□□□□□ -0.18
NOD1-202ENST00000411552 A0A096LNT2 108 aa13.94□□□□□ -0.18
NOD1-202ENST00000411552 LOC390937A0A1W2PQ73 354 aa13.94□□□□□ -0.18
NOD1-202ENST00000411552 SAC3D1A6NKF1 404 aa13.94□□□□□ -0.18
NOD1-202ENST00000411552 C17orf100A8MU93 164 aa13.94□□□□□ -0.18
NOD1-202ENST00000411552 F5H5K5 113 aa13.94□□□□□ -0.18
NOD1-202ENST00000411552 ZNF593O00488 134 aaPredicted RBP13.94□□□□□ -0.18
NOD1-202ENST00000411552 GLCEO94923 617 aa13.94□□□□□ -0.18
NOD1-202ENST00000411552 LY6G6DO95868 133 aa13.94□□□□□ -0.18
NOD1-202ENST00000411552 SLC25A16P16260 332 aa13.94□□□□□ -0.18
NOD1-202ENST00000411552 TUBG1P23258 451 aa13.94□□□□□ -0.18
NOD1-202ENST00000411552 EPHA2P29317 976 aa13.94□□□□□ -0.18
NOD1-202ENST00000411552 GSTT1P30711 240 aa13.94□□□□□ -0.18
NOD1-202ENST00000411552 RGS6P49758 472 aa13.94□□□□□ -0.18
NOD1-202ENST00000411552 SNAPC1Q16533 368 aa13.94□□□□□ -0.18
NOD1-202ENST00000411552 MOGQ16653 247 aa13.94□□□□□ -0.18
NOD1-202ENST00000411552 TEX30Q5JUR7 227 aa13.94□□□□□ -0.18
NOD1-202ENST00000411552 CLEC9AQ6UXN8 241 aa13.94□□□□□ -0.18
NOD1-202ENST00000411552 DCXRQ7Z4W1 244 aa13.94□□□□□ -0.18
NOD1-202ENST00000411552 UBASH3BQ8TF42 649 aa13.94□□□□□ -0.18
NOD1-202ENST00000411552 MARCH7Q9H992 704 aa13.94□□□□□ -0.18
NOD1-202ENST00000411552 TUBG2Q9NRH3 451 aa13.94□□□□□ -0.18
NOD1-202ENST00000411552 TVP23BQ9NYZ1 205 aa13.94□□□□□ -0.18
NOD1-202ENST00000411552 TMEFF2Q9UIK5 374 aaPredicted RBP13.94□□□□□ -0.18
NOD1-202ENST00000411552 NSD1Q96L73 2696 aaPredicted RBP13.94□□□□□ -0.18
NOD1-202ENST00000411552 LYNX1G3V0Z9 82 aa13.93□□□□□ -0.18
NOD1-202ENST00000411552 J3QW42 95 aa13.93□□□□□ -0.18
NOD1-202ENST00000411552 NDUFS8O00217 210 aa13.93□□□□□ -0.18
NOD1-202ENST00000411552 NCR1O76036 304 aa13.93□□□□□ -0.18
NOD1-202ENST00000411552 HPXP02790 462 aa13.93□□□□□ -0.18
NOD1-202ENST00000411552 MT-ND5P03915 603 aa13.93□□□□□ -0.18
NOD1-202ENST00000411552 ACSM4P0C7M7 580 aa13.93□□□□□ -0.18
NOD1-202ENST00000411552 LYNX1P0DP58 116 aa13.93□□□□□ -0.18
NOD1-202ENST00000411552 IGFBP5P24593 272 aa13.93□□□□□ -0.18
NOD1-202ENST00000411552 MAGEB1P43366 347 aa13.93□□□□□ -0.18
NOD1-202ENST00000411552 MMP15P51511 669 aa13.93□□□□□ -0.18
NOD1-202ENST00000411552 PSG7Q13046 419 aa13.93□□□□□ -0.18
NOD1-202ENST00000411552 KLHL12Q53G59 568 aa13.93□□□□□ -0.18
NOD1-202ENST00000411552 CXXC5Q7LFL8 322 aaKnown RBP13.93□□□□□ -0.18
NOD1-202ENST00000411552 ERI1Q8IV48 349 aaKnown RBP13.93□□□□□ -0.18
NOD1-202ENST00000411552 ZNF786Q8N393 782 aa13.93□□□□□ -0.18
NOD1-202ENST00000411552 BBS1Q8NFJ9 593 aa13.93□□□□□ -0.18
NOD1-202ENST00000411552 APOBEC3DQ96AK3 386 aaPredicted RBP13.93□□□□□ -0.18
NOD1-202ENST00000411552 CMBLQ96DG6 245 aa13.93□□□□□ -0.18
NOD1-202ENST00000411552 ZMYND19Q96E35 227 aaPredicted RBP13.93□□□□□ -0.18
NOD1-202ENST00000411552 COG8Q96MW5 612 aa13.93□□□□□ -0.18
NOD1-202ENST00000411552 INTS14Q96SY0 518 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms