RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 SHISA8B8ZZ34 492 aa12.06□□□□□ -0.48
LIMS1-205ENST00000410093 RBBP9O75884 186 aa12.06□□□□□ -0.48
LIMS1-205ENST00000410093 MPZL1O95297 269 aa12.06□□□□□ -0.48
LIMS1-205ENST00000410093 JMJD7P0C870 316 aa12.06□□□□□ -0.48
LIMS1-205ENST00000410093 CCL3P10147 92 aa12.06□□□□□ -0.48
LIMS1-205ENST00000410093 TCN2P20062 427 aa12.06□□□□□ -0.48
LIMS1-205ENST00000410093 CTSSP25774 331 aa12.06□□□□□ -0.48
LIMS1-205ENST00000410093 STOMP27105 288 aa12.06□□□□□ -0.48
LIMS1-205ENST00000410093 HTR2CP28335 458 aa12.06□□□□□ -0.48
LIMS1-205ENST00000410093 HSD11B1P28845 292 aa12.06□□□□□ -0.48
LIMS1-205ENST00000410093 GABREP78334 506 aa12.06□□□□□ -0.48
LIMS1-205ENST00000410093 MFGE8Q08431 387 aaPredicted RBP12.06□□□□□ -0.48
LIMS1-205ENST00000410093 C1orf100Q5SVJ3 147 aa12.06□□□□□ -0.48
LIMS1-205ENST00000410093 RAB12Q6IQ22 244 aa12.06□□□□□ -0.48
LIMS1-205ENST00000410093 FOXL2NBQ6ZUU3 175 aa12.06□□□□□ -0.48
LIMS1-205ENST00000410093 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.06□□□□□ -0.48
LIMS1-205ENST00000410093 GPAT4Q86UL3 456 aa12.06□□□□□ -0.48
LIMS1-205ENST00000410093 OR10AC1Q8NH08 325 aa12.06□□□□□ -0.48
LIMS1-205ENST00000410093 IP6K3Q96PC2 410 aa12.06□□□□□ -0.48
LIMS1-205ENST00000410093 SORCS2Q96PQ0 1159 aa12.06□□□□□ -0.48
LIMS1-205ENST00000410093 UQCC2Q9BRT2 126 aa12.06□□□□□ -0.48
LIMS1-205ENST00000410093 SPRY4Q9C004 299 aa12.06□□□□□ -0.48
LIMS1-205ENST00000410093 NUDT15Q9NV35 164 aa12.06□□□□□ -0.48
LIMS1-205ENST00000410093 GDF2Q9UK05 429 aaPredicted RBP12.06□□□□□ -0.48
LIMS1-205ENST00000410093 FBXL3Q9UKT7 428 aa12.06□□□□□ -0.48
LIMS1-205ENST00000410093 POLR1DQ9Y2S0 133 aa12.06□□□□□ -0.48
LIMS1-205ENST00000410093 HRH3Q9Y5N1 445 aa12.06□□□□□ -0.48
LIMS1-205ENST00000410093 EML6Q6ZMW3 1958 aa12.06□□□□□ -0.48
LIMS1-205ENST00000410093 KIAA1549Q9HCM3 1950 aa12.06□□□□□ -0.48
LIMS1-205ENST00000410093 A0A1W2PNR3 127 aa12.06□□□□□ -0.48
LIMS1-205ENST00000410093 A0A1W2PPL8 197 aa12.06□□□□□ -0.48
LIMS1-205ENST00000410093 H7C417 338 aa12.06□□□□□ -0.48
LIMS1-205ENST00000410093 ZIC3O60481 467 aa12.06□□□□□ -0.48
LIMS1-205ENST00000410093 GABRA1P14867 456 aa12.06□□□□□ -0.48
LIMS1-205ENST00000410093 PSMB1P20618 241 aaKnown RBP12.06□□□□□ -0.48
LIMS1-205ENST00000410093 GIFP27352 417 aa12.06□□□□□ -0.48
LIMS1-205ENST00000410093 SFTPDP35247 375 aa12.06□□□□□ -0.48
LIMS1-205ENST00000410093 MAGEB1P43366 347 aa12.06□□□□□ -0.48
LIMS1-205ENST00000410093 POU3F4P49335 361 aa12.06□□□□□ -0.48
LIMS1-205ENST00000410093 SUCLG1P53597 346 aaKnown RBP12.06□□□□□ -0.48
LIMS1-205ENST00000410093 C2orf76Q3KRA6 126 aa12.06□□□□□ -0.48
LIMS1-205ENST00000410093 CDCP2Q5VXM1 449 aa12.06□□□□□ -0.48
LIMS1-205ENST00000410093 RAET1LQ5VY80 246 aa12.06□□□□□ -0.48
LIMS1-205ENST00000410093 OR5D14Q8NGL3 314 aa12.06□□□□□ -0.48
LIMS1-205ENST00000410093 OR52I2Q8NH67 350 aa12.06□□□□□ -0.48
LIMS1-205ENST00000410093 TMEM54Q969K7 222 aa12.06□□□□□ -0.48
LIMS1-205ENST00000410093 ORAI1Q96D31 301 aa12.06□□□□□ -0.48
LIMS1-205ENST00000410093 FOXN4Q96NZ1 517 aa12.06□□□□□ -0.48
LIMS1-205ENST00000410093 NUDT16L1Q9BRJ7 211 aaKnown RBP12.06□□□□□ -0.48
LIMS1-205ENST00000410093 UTP23Q9BRU9 249 aaKnown RBP12.06□□□□□ -0.48
LIMS1-205ENST00000410093 EMC6Q9BV81 110 aa12.06□□□□□ -0.48
LIMS1-205ENST00000410093 GHITMQ9H3K2 345 aa12.06□□□□□ -0.48
LIMS1-205ENST00000410093 PROK2Q9HC23 129 aa12.06□□□□□ -0.48
LIMS1-205ENST00000410093 HRASLSQ9HDD0 168 aa12.06□□□□□ -0.48
LIMS1-205ENST00000410093 EMC7Q9NPA0 242 aa12.06□□□□□ -0.48
LIMS1-205ENST00000410093 CENPMQ9NSP4 180 aa12.06□□□□□ -0.48
LIMS1-205ENST00000410093 MCUBQ9NWR8 336 aa12.06□□□□□ -0.48
LIMS1-205ENST00000410093 GLTPQ9NZD2 209 aa12.06□□□□□ -0.48
LIMS1-205ENST00000410093 MTFP1Q9UDX5 166 aa12.06□□□□□ -0.48
LIMS1-205ENST00000410093 POU2F3Q9UKI9 436 aa12.06□□□□□ -0.48
LIMS1-205ENST00000410093 CHD8Q9HCK8 2581 aa12.05□□□□□ -0.48
LIMS1-205ENST00000410093 CCDC187A0A096LP49 1063 aa12.05□□□□□ -0.48
LIMS1-205ENST00000410093 A0A1B0GVI7 797 aa12.05□□□□□ -0.48
LIMS1-205ENST00000410093 OR2M5A3KFT3 312 aa12.05□□□□□ -0.48
LIMS1-205ENST00000410093 NPIPA2E9PIF3 369 aa12.05□□□□□ -0.48
LIMS1-205ENST00000410093 NPIPA3F8WFD2 350 aa12.05□□□□□ -0.48
LIMS1-205ENST00000410093 PEX14O75381 377 aa12.05□□□□□ -0.48
LIMS1-205ENST00000410093 CTAG2O75638 210 aa12.05□□□□□ -0.48
LIMS1-205ENST00000410093 TGM6O95932 706 aa12.05□□□□□ -0.48
LIMS1-205ENST00000410093 ITGA5P08648 1049 aa12.05□□□□□ -0.48
LIMS1-205ENST00000410093 QDPRP09417 244 aa12.05□□□□□ -0.48
LIMS1-205ENST00000410093 CSNK1A1P48729 337 aa12.05□□□□□ -0.48
LIMS1-205ENST00000410093 SRP9P49458 86 aaKnown RBP12.05□□□□□ -0.48
LIMS1-205ENST00000410093 GSK3AP49840 483 aa12.05□□□□□ -0.48
LIMS1-205ENST00000410093 MECP2P51608 486 aaKnown RBP12.05□□□□□ -0.48
LIMS1-205ENST00000410093 CLDN12P56749 244 aa12.05□□□□□ -0.48
LIMS1-205ENST00000410093 ACTBP60709 375 aa12.05□□□□□ -0.48
LIMS1-205ENST00000410093 RAC3P60763 192 aa12.05□□□□□ -0.48
LIMS1-205ENST00000410093 ACTG1P63261 375 aa12.05□□□□□ -0.48
LIMS1-205ENST00000410093 CAMK2DQ13557 499 aa12.05□□□□□ -0.48
LIMS1-205ENST00000410093 CDK10Q15131 360 aa12.05□□□□□ -0.48
LIMS1-205ENST00000410093 TAF13Q15543 124 aa12.05□□□□□ -0.48
LIMS1-205ENST00000410093 ESPNLQ6ZVH7 1005 aa12.05□□□□□ -0.48
LIMS1-205ENST00000410093 CREB3L2Q70SY1 520 aa12.05□□□□□ -0.48
LIMS1-205ENST00000410093 PGAP1Q75T13 922 aa12.05□□□□□ -0.48
LIMS1-205ENST00000410093 PRSS45Q7RTY3 260 aa12.05□□□□□ -0.48
LIMS1-205ENST00000410093 ADGRE4PQ86SQ3 457 aa12.05□□□□□ -0.48
LIMS1-205ENST00000410093 LUZP2Q86TE4 346 aa12.05□□□□□ -0.48
LIMS1-205ENST00000410093 LINC00346Q8IVM7 164 aa12.05□□□□□ -0.48
LIMS1-205ENST00000410093 CT55Q8WUE5 264 aa12.05□□□□□ -0.48
LIMS1-205ENST00000410093 SLC25A28Q96A46 364 aa12.05□□□□□ -0.48
LIMS1-205ENST00000410093 HYLS1Q96M11 299 aa12.05□□□□□ -0.48
LIMS1-205ENST00000410093 SMAD5Q99717 465 aaKnown RBP12.05□□□□□ -0.48
LIMS1-205ENST00000410093 PBOV1Q9GZY1 135 aa12.05□□□□□ -0.48
LIMS1-205ENST00000410093 SLA2Q9H6Q3 261 aa12.05□□□□□ -0.48
LIMS1-205ENST00000410093 SEC61A2Q9H9S3 476 aa12.05□□□□□ -0.48
LIMS1-205ENST00000410093 RANGRFQ9HD47 186 aaPredicted RBP12.05□□□□□ -0.48
LIMS1-205ENST00000410093 TMEM138Q9NPI0 162 aa12.05□□□□□ -0.48
LIMS1-205ENST00000410093 ABI3Q9P2A4 366 aa12.05□□□□□ -0.48
LIMS1-205ENST00000410093 FBLN5Q9UBX5 448 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms