RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 TMEM272A0A1B0GTI8 110 aa17.82■□□□□ 0.44
USP39-204ENST00000409766 NAP1L6A6NFF2 107 aa17.82■□□□□ 0.44
USP39-204ENST00000409766 GSTT2BP0CG30 244 aa17.82■□□□□ 0.44
USP39-204ENST00000409766 SRD5A2P31213 254 aa17.82■□□□□ 0.44
USP39-204ENST00000409766 LYPD6Q86Y78 171 aa17.82■□□□□ 0.44
USP39-204ENST00000409766 ESX1Q8N693 406 aa17.82■□□□□ 0.44
USP39-204ENST00000409766 ZNF385AQ96PM9 386 aaKnown RBP17.82■□□□□ 0.44
USP39-204ENST00000409766 OR2M2Q96R28 347 aa17.82■□□□□ 0.44
USP39-204ENST00000409766 NAA11Q9BSU3 229 aaPredicted RBP17.82■□□□□ 0.44
USP39-204ENST00000409766 PNRC2Q9NPJ4 139 aaKnown RBP17.82■□□□□ 0.44
USP39-204ENST00000409766 DIABLOQ9NR28 239 aa17.82■□□□□ 0.44
USP39-204ENST00000409766 CGGBP1Q9UFW8 167 aaPredicted RBP17.82■□□□□ 0.44
USP39-204ENST00000409766 LOC390937A0A1W2PQ73 354 aa17.82■□□□□ 0.44
USP39-204ENST00000409766 H2AFB2P0C5Z0 115 aa17.82■□□□□ 0.44
USP39-204ENST00000409766 NR2C1P13056 603 aa17.82■□□□□ 0.44
USP39-204ENST00000409766 PSMA6P60900 246 aaKnown RBP17.82■□□□□ 0.44
USP39-204ENST00000409766 SPOCK1Q08629 439 aa17.82■□□□□ 0.44
USP39-204ENST00000409766 TOMM20Q15388 145 aa17.82■□□□□ 0.44
USP39-204ENST00000409766 OR6M1Q8NGM8 313 aa17.82■□□□□ 0.44
USP39-204ENST00000409766 PSMF1Q92530 271 aa17.82■□□□□ 0.44
USP39-204ENST00000409766 TMEM54Q969K7 222 aa17.82■□□□□ 0.44
USP39-204ENST00000409766 ACTR6Q9GZN1 396 aa17.82■□□□□ 0.44
USP39-204ENST00000409766 NIPAL2Q9H841 368 aa17.82■□□□□ 0.44
USP39-204ENST00000409766 R4GN57 208 aa17.82■□□□□ 0.44
USP39-204ENST00000409766 TTC28Q96AY4 2481 aa17.82■□□□□ 0.44
USP39-204ENST00000409766 DCDC2BA2VCK2 349 aa17.81■□□□□ 0.44
USP39-204ENST00000409766 GJE1A6NN92 205 aa17.81■□□□□ 0.44
USP39-204ENST00000409766 TNFSF11O14788 317 aa17.81■□□□□ 0.44
USP39-204ENST00000409766 RER1O15258 196 aa17.81■□□□□ 0.44
USP39-204ENST00000409766 YES1P07947 543 aa17.81■□□□□ 0.44
USP39-204ENST00000409766 ZNF133P52736 654 aaPredicted RBP17.81■□□□□ 0.44
USP39-204ENST00000409766 MRPS15P82914 257 aaKnown RBP17.81■□□□□ 0.44
USP39-204ENST00000409766 GSG1Q2KHT4 349 aa17.81■□□□□ 0.44
USP39-204ENST00000409766 OLFML2AQ68BL7 652 aa17.81■□□□□ 0.44
USP39-204ENST00000409766 SFRP4Q6FHJ7 346 aaPredicted RBP17.81■□□□□ 0.44
USP39-204ENST00000409766 OR9K2Q8NGE7 335 aa17.81■□□□□ 0.44
USP39-204ENST00000409766 OR56B4Q8NH76 319 aa17.81■□□□□ 0.44
USP39-204ENST00000409766 FGGYQ96C11 551 aa17.81■□□□□ 0.44
USP39-204ENST00000409766 NCOA6Q14686 2063 aaPredicted RBP17.81■□□□□ 0.44
USP39-204ENST00000409766 NPIPA2E9PIF3 369 aa17.81■□□□□ 0.44
USP39-204ENST00000409766 NPIPA3F8WFD2 350 aa17.81■□□□□ 0.44
USP39-204ENST00000409766 SYT7O43581 403 aa17.81■□□□□ 0.44
USP39-204ENST00000409766 KDM4BO94953 1096 aa17.81■□□□□ 0.44
USP39-204ENST00000409766 HSD11B1P28845 292 aa17.81■□□□□ 0.44
USP39-204ENST00000409766 CSNK1A1P48729 337 aa17.81■□□□□ 0.44
USP39-204ENST00000409766 SF3B4Q15427 424 aaKnown RBP eCLIP17.81■□□□□ 0.443e-14■■■■■ 33.9
USP39-204ENST00000409766 ELFN2Q5R3F8 820 aa17.81■□□□□ 0.44
USP39-204ENST00000409766 PHYHD1Q5SRE7 291 aa17.81■□□□□ 0.44
USP39-204ENST00000409766 C1orf100Q5SVJ3 147 aa17.81■□□□□ 0.44
USP39-204ENST00000409766 C10orf128Q5T292 105 aa17.81■□□□□ 0.44
USP39-204ENST00000409766 LIX1LQ8IVB5 337 aa17.81■□□□□ 0.44
USP39-204ENST00000409766 TMEM123Q8N131 208 aa17.81■□□□□ 0.44
USP39-204ENST00000409766 NKAIN3Q8N8D7 197 aa17.81■□□□□ 0.44
USP39-204ENST00000409766 SRXN1Q9BYN0 137 aa17.81■□□□□ 0.44
USP39-204ENST00000409766 MOB1AQ9H8S9 216 aa17.81■□□□□ 0.44
USP39-204ENST00000409766 RHBDD3Q9Y3P4 386 aa17.81■□□□□ 0.44
USP39-204ENST00000409766 LRRC3CA6NJW4 275 aa17.8■□□□□ 0.44
USP39-204ENST00000409766 H7C417 338 aa17.8■□□□□ 0.44
USP39-204ENST00000409766 ENPP1P22413 925 aa17.8■□□□□ 0.44
USP39-204ENST00000409766 ZNF813Q6ZN06 617 aa17.8■□□□□ 0.44
USP39-204ENST00000409766 YRDCQ86U90 279 aaKnown RBP17.8■□□□□ 0.44
USP39-204ENST00000409766 BEST3Q8N1M1 668 aa17.8■□□□□ 0.44
USP39-204ENST00000409766 ZIC4Q8N9L1 334 aa17.8■□□□□ 0.44
USP39-204ENST00000409766 OR6N1Q8NGY5 312 aa17.8■□□□□ 0.44
USP39-204ENST00000409766 C20orf85Q9H1P6 137 aa17.8■□□□□ 0.44
USP39-204ENST00000409766 MED28Q9H204 178 aa17.8■□□□□ 0.44
USP39-204ENST00000409766 MTFP1Q9UDX5 166 aa17.8■□□□□ 0.44
USP39-204ENST00000409766 CNTRLQ7Z7A1 2325 aa17.8■□□□□ 0.44
USP39-204ENST00000409766 A0A1B0GTI1 187 aa17.79■□□□□ 0.44
USP39-204ENST00000409766 DNPH1O43598 174 aa17.79■□□□□ 0.44
USP39-204ENST00000409766 RFPL3SP0C7P2 107 aa17.79■□□□□ 0.44
USP39-204ENST00000409766 PSMB1P20618 241 aaKnown RBP17.79■□□□□ 0.44
USP39-204ENST00000409766 SDHBP21912 280 aa17.79■□□□□ 0.44
USP39-204ENST00000409766 CYB561P49447 251 aa17.79■□□□□ 0.44
USP39-204ENST00000409766 LSM6P62312 80 aaKnown RBP17.79■□□□□ 0.44
USP39-204ENST00000409766 MAB21L1Q13394 359 aa17.79■□□□□ 0.44
USP39-204ENST00000409766 FCN2Q15485 313 aa17.79■□□□□ 0.44
USP39-204ENST00000409766 TAF13Q15543 124 aa17.79■□□□□ 0.44
USP39-204ENST00000409766 LUZP2Q86TE4 346 aa17.79■□□□□ 0.44
USP39-204ENST00000409766 JAGN1Q8N5M9 183 aa17.79■□□□□ 0.44
USP39-204ENST00000409766 OR1J2Q8NGS2 313 aa17.79■□□□□ 0.44
USP39-204ENST00000409766 OR14L1PQ8NHC6 308 aa17.79■□□□□ 0.44
USP39-204ENST00000409766 ADAT3Q96EY9 351 aaPredicted RBP17.79■□□□□ 0.44
USP39-204ENST00000409766 ZNF416Q9BWM5 594 aa17.79■□□□□ 0.44
USP39-204ENST00000409766 OR51J1Q9H342 316 aa17.79■□□□□ 0.44
USP39-204ENST00000409766 DEPPQ9NTK1 212 aa17.79■□□□□ 0.44
USP39-204ENST00000409766 PAQR5Q9NXK6 330 aaPredicted RBP17.79■□□□□ 0.44
USP39-204ENST00000409766 TRAV18A0A075B6X5 111 aa17.79■□□□□ 0.44
USP39-204ENST00000409766 CCDC187A0A096LP49 1063 aa17.79■□□□□ 0.44
USP39-204ENST00000409766 LDLRAD4O15165 306 aa17.79■□□□□ 0.44
USP39-204ENST00000409766 RBBP9O75884 186 aa17.79■□□□□ 0.44
USP39-204ENST00000409766 WDPCPO95876 746 aa17.79■□□□□ 0.44
USP39-204ENST00000409766 C1QBP02746 253 aa17.79■□□□□ 0.44
USP39-204ENST00000409766 PRKXP51817 358 aa17.79■□□□□ 0.44
USP39-204ENST00000409766 RAC3P60763 192 aa17.79■□□□□ 0.44
USP39-204ENST00000409766 FOXL2NBQ6ZUU3 175 aa17.79■□□□□ 0.44
USP39-204ENST00000409766 OR51E1Q8TCB6 317 aa17.79■□□□□ 0.44
USP39-204ENST00000409766 KCNE4Q8WWG9 221 aa17.79■□□□□ 0.44
USP39-204ENST00000409766 PHF21AQ96BD5 680 aa17.79■□□□□ 0.44
USP39-204ENST00000409766 FOXRED1Q96CU9 486 aaPredicted RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms