RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 KCTD21Q4G0X4 260 aa14.36□□□□□ -0.11
TSPAN4-208ENST00000409531 CCDC92Q53HC0 331 aaPredicted RBP14.36□□□□□ -0.11
TSPAN4-208ENST00000409531 ZNF774Q6NX45 483 aa14.36□□□□□ -0.11
TSPAN4-208ENST00000409531 DEGS2Q6QHC5 323 aa14.36□□□□□ -0.11
TSPAN4-208ENST00000409531 ZNF322Q6U7Q0 402 aaPredicted RBP14.36□□□□□ -0.11
TSPAN4-208ENST00000409531 VASH1Q7L8A9 365 aaPredicted RBP14.36□□□□□ -0.11
TSPAN4-208ENST00000409531 KRT77Q7Z794 578 aa14.36□□□□□ -0.11
TSPAN4-208ENST00000409531 EGFL6Q8IUX8 553 aa14.36□□□□□ -0.11
TSPAN4-208ENST00000409531 AKR7LQ8NHP1 331 aa14.36□□□□□ -0.11
TSPAN4-208ENST00000409531 SNX33Q8WV41 574 aa14.36□□□□□ -0.11
TSPAN4-208ENST00000409531 RNF133Q8WVZ7 376 aa14.36□□□□□ -0.11
TSPAN4-208ENST00000409531 COQ7Q99807 217 aa14.36□□□□□ -0.11
TSPAN4-208ENST00000409531 RHNO1Q9BSD3 238 aa14.36□□□□□ -0.11
TSPAN4-208ENST00000409531 MROQ9BYG7 248 aa14.36□□□□□ -0.11
TSPAN4-208ENST00000409531 CLEC4MQ9H2X3 399 aaPredicted RBP14.36□□□□□ -0.11
TSPAN4-208ENST00000409531 CENPMQ9NSP4 180 aa14.36□□□□□ -0.11
TSPAN4-208ENST00000409531 DDX28Q9NUL7 540 aaKnown RBP14.36□□□□□ -0.11
TSPAN4-208ENST00000409531 CRNNQ9UBG3 495 aaPredicted RBP14.36□□□□□ -0.11
TSPAN4-208ENST00000409531 COPS3Q9UNS2 423 aa14.36□□□□□ -0.11
TSPAN4-208ENST00000409531 POLQO75417 2590 aa14.36□□□□□ -0.11
TSPAN4-208ENST00000409531 RTTNQ86VV8 2226 aa14.35□□□□□ -0.11
TSPAN4-208ENST00000409531 OR6C6A6NF89 314 aa14.35□□□□□ -0.11
TSPAN4-208ENST00000409531 SYNGR3O43761 229 aa14.35□□□□□ -0.11
TSPAN4-208ENST00000409531 ZNF254O75437 659 aa14.35□□□□□ -0.11
TSPAN4-208ENST00000409531 H2BFMP0C1H6 154 aa14.35□□□□□ -0.11
TSPAN4-208ENST00000409531 ZNF14P17017 642 aaPredicted RBP14.35□□□□□ -0.11
TSPAN4-208ENST00000409531 APLNRP35414 380 aa14.35□□□□□ -0.11
TSPAN4-208ENST00000409531 HTR5AP47898 357 aa14.35□□□□□ -0.11
TSPAN4-208ENST00000409531 ROM1Q03395 351 aa14.35□□□□□ -0.11
TSPAN4-208ENST00000409531 RAB39AQ14964 217 aa14.35□□□□□ -0.11
TSPAN4-208ENST00000409531 PLEKHG7Q6ZR37 379 aa14.35□□□□□ -0.11
TSPAN4-208ENST00000409531 C22orf34Q6ZV56 151 aa14.35□□□□□ -0.11
TSPAN4-208ENST00000409531 KCTD20Q7Z5Y7 419 aa14.35□□□□□ -0.11
TSPAN4-208ENST00000409531 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.35□□□□□ -0.11
TSPAN4-208ENST00000409531 ZNF679Q8IYX0 411 aa14.35□□□□□ -0.11
TSPAN4-208ENST00000409531 IL17RDQ8NFM7 739 aa14.35□□□□□ -0.11
TSPAN4-208ENST00000409531 OR1J2Q8NGS2 313 aa14.35□□□□□ -0.11
TSPAN4-208ENST00000409531 OR1F12Q8NHA8 337 aa14.35□□□□□ -0.11
TSPAN4-208ENST00000409531 ZC3HAV1LQ96H79 300 aaKnown RBP14.35□□□□□ -0.11
TSPAN4-208ENST00000409531 ZNF75AQ96N20 296 aa14.35□□□□□ -0.11
TSPAN4-208ENST00000409531 NIPAL2Q9H841 368 aa14.35□□□□□ -0.11
TSPAN4-208ENST00000409531 NOX3Q9HBY0 568 aa14.35□□□□□ -0.11
TSPAN4-208ENST00000409531 PAK1IP1Q9NWT1 392 aaPredicted RBP14.35□□□□□ -0.11
TSPAN4-208ENST00000409531 ERVK13-1Q9NX77 482 aa14.35□□□□□ -0.11
TSPAN4-208ENST00000409531 IKZF2Q9UKS7 526 aa14.35□□□□□ -0.11
TSPAN4-208ENST00000409531 KLHDC2Q9Y2U9 406 aa14.35□□□□□ -0.11
TSPAN4-208ENST00000409531 SULT1C4O75897 302 aa14.34□□□□□ -0.11
TSPAN4-208ENST00000409531 IGLV1-44P01699 117 aa14.34□□□□□ -0.11
TSPAN4-208ENST00000409531 APOC1P02654 83 aa14.34□□□□□ -0.11
TSPAN4-208ENST00000409531 KRT8P05787 483 aa14.34□□□□□ -0.11
TSPAN4-208ENST00000409531 TACSTD2P09758 323 aa14.34□□□□□ -0.11
TSPAN4-208ENST00000409531 CRYGSP22914 178 aa14.34□□□□□ -0.11
TSPAN4-208ENST00000409531 STOMP27105 288 aa14.34□□□□□ -0.11
TSPAN4-208ENST00000409531 HSD11B1P28845 292 aa14.34□□□□□ -0.11
TSPAN4-208ENST00000409531 IDH3GP51553 393 aaPredicted RBP14.34□□□□□ -0.11
TSPAN4-208ENST00000409531 ZNF85Q03923 595 aa14.34□□□□□ -0.11
TSPAN4-208ENST00000409531 TBC1D28Q2M2D7 210 aa14.34□□□□□ -0.11
TSPAN4-208ENST00000409531 RNLSQ5VYX0 342 aa14.34□□□□□ -0.11
TSPAN4-208ENST00000409531 ALKBH2Q6NS38 261 aa14.34□□□□□ -0.11
TSPAN4-208ENST00000409531 TMPRSS11AQ6ZMR5 421 aa14.34□□□□□ -0.11
TSPAN4-208ENST00000409531 PRSS48Q7RTY5 328 aa14.34□□□□□ -0.11
TSPAN4-208ENST00000409531 FAM220AQ7Z4H9 259 aa14.34□□□□□ -0.11
TSPAN4-208ENST00000409531 LHFPL3Q86UP9 236 aa14.34□□□□□ -0.11
TSPAN4-208ENST00000409531 WFDC8Q8IUA0 241 aa14.34□□□□□ -0.11
TSPAN4-208ENST00000409531 CPEB3Q8NE35 698 aaKnown RBP14.34□□□□□ -0.11
TSPAN4-208ENST00000409531 OR10S1Q8NGN2 331 aa14.34□□□□□ -0.11
TSPAN4-208ENST00000409531 SPTSSAQ969W0 71 aa14.34□□□□□ -0.11
TSPAN4-208ENST00000409531 OR8B4Q96RC9 309 aa14.34□□□□□ -0.11
TSPAN4-208ENST00000409531 AMELYQ99218 206 aa14.34□□□□□ -0.11
TSPAN4-208ENST00000409531 ALG8Q9BVK2 526 aa14.34□□□□□ -0.11
TSPAN4-208ENST00000409531 C1QTNF6Q9BXI9 259 aa14.34□□□□□ -0.11
TSPAN4-208ENST00000409531 PNRC2Q9NPJ4 139 aaKnown RBP14.34□□□□□ -0.11
TSPAN4-208ENST00000409531 ERGIC3Q9Y282 383 aa14.34□□□□□ -0.11
TSPAN4-208ENST00000409531 PDZD2O15018 2839 aa14.34□□□□□ -0.11
TSPAN4-208ENST00000409531 M0R1B8 84 aa14.33□□□□□ -0.12
TSPAN4-208ENST00000409531 MYL12BO14950 172 aa14.33□□□□□ -0.12
TSPAN4-208ENST00000409531 THBDP07204 575 aa14.33□□□□□ -0.12
TSPAN4-208ENST00000409531 APEX1P27695 318 aaKnown RBP14.33□□□□□ -0.12
TSPAN4-208ENST00000409531 C21orf33P30042 268 aaPredicted RBP14.33□□□□□ -0.12
TSPAN4-208ENST00000409531 OPRL1P41146 370 aa14.33□□□□□ -0.12
TSPAN4-208ENST00000409531 GDI2P50395 445 aaKnown RBP14.33□□□□□ -0.12
TSPAN4-208ENST00000409531 ZNF83P51522 516 aa14.33□□□□□ -0.12
TSPAN4-208ENST00000409531 RIDAP52758 137 aaKnown RBP14.33□□□□□ -0.12
TSPAN4-208ENST00000409531 CDONQ4KMG0 1287 aa14.33□□□□□ -0.12
TSPAN4-208ENST00000409531 TMEM108Q6UXF1 575 aa14.33□□□□□ -0.12
TSPAN4-208ENST00000409531 LRRN1Q6UXK5 716 aa14.33□□□□□ -0.12
TSPAN4-208ENST00000409531 SSX6Q7RTT6 188 aa14.33□□□□□ -0.12
TSPAN4-208ENST00000409531 ZNF584Q8IVC4 421 aa14.33□□□□□ -0.12
TSPAN4-208ENST00000409531 SYS1Q8N2H4 156 aa14.33□□□□□ -0.12
TSPAN4-208ENST00000409531 KLHL36Q8N4N3 616 aa14.33□□□□□ -0.12
TSPAN4-208ENST00000409531 RFLNBQ8N5W9 214 aa14.33□□□□□ -0.12
TSPAN4-208ENST00000409531 SLC30A7Q8NEW0 376 aa14.33□□□□□ -0.12
TSPAN4-208ENST00000409531 HAVCR2Q8TDQ0 301 aa14.33□□□□□ -0.12
TSPAN4-208ENST00000409531 DCLRE1CQ96SD1 692 aaKnown RBP14.33□□□□□ -0.12
TSPAN4-208ENST00000409531 KCNJ15Q99712 375 aa14.33□□□□□ -0.12
TSPAN4-208ENST00000409531 KCNS3Q9BQ31 491 aa14.33□□□□□ -0.12
TSPAN4-208ENST00000409531 CDCA4Q9BXL8 241 aa14.33□□□□□ -0.12
TSPAN4-208ENST00000409531 CCDC90BQ9GZT6 254 aa14.33□□□□□ -0.12
TSPAN4-208ENST00000409531 ERVK-18Q9QC07 812 aa14.33□□□□□ -0.12
TSPAN4-208ENST00000409531 CAB39Q9Y376 341 aaPredicted RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms