RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 TM4SF19Q96DZ7 209 aa3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 FAM122AQ96E09 287 aa3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 VSIG2Q96IQ7 327 aa3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 ZNF184Q99676 751 aaPredicted RBP3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 RNF126Q9BV68 326 aa3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 IQCGQ9H095 443 aaKnown RBP3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 GBA3Q9H227 469 aa3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 RANBP3Q9H6Z4 567 aaPredicted RBP3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 ZDHHC11Q9H8X9 412 aa3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 ZNF702PQ9H963 129 aa3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 DMAP1Q9NPF5 467 aaPredicted RBP3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 RGS18Q9NS28 235 aa3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 ZNF275Q9NSD4 429 aaPredicted RBP3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 TREM2Q9NZC2 230 aa3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 KCNIP1Q9NZI2 227 aa3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 CSDC2Q9Y534 153 aaKnown RBP3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 SNX10Q9Y5X0 201 aa3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 IGHV3OR16-13A0A075B7E8 117 aa3.55□□□□□ -1.84
HMGB3P18-201ENST00000406327 A0A0G2JND7 137 aa3.55□□□□□ -1.84
HMGB3P18-201ENST00000406327 A0A1W2PPV9 198 aa3.55□□□□□ -1.84
HMGB3P18-201ENST00000406327 TUBAL3A6NHL2 446 aa3.55□□□□□ -1.84
HMGB3P18-201ENST00000406327 PLIN3O60664 434 aa3.55□□□□□ -1.84
HMGB3P18-201ENST00000406327 OR7A10O76100 309 aa3.55□□□□□ -1.84
HMGB3P18-201ENST00000406327 IGHV3-23P01764 117 aa3.55□□□□□ -1.84
HMGB3P18-201ENST00000406327 FTH1P02794 183 aa3.55□□□□□ -1.84
HMGB3P18-201ENST00000406327 P04436 131 aa3.55□□□□□ -1.84
HMGB3P18-201ENST00000406327 RBMY1CP0DJD4 496 aa3.55□□□□□ -1.84
HMGB3P18-201ENST00000406327 MYL2P10916 166 aa3.55□□□□□ -1.84
HMGB3P18-201ENST00000406327 ANXA8P13928 327 aa3.55□□□□□ -1.84
HMGB3P18-201ENST00000406327 ZNF24P17028 368 aa3.55□□□□□ -1.84
HMGB3P18-201ENST00000406327 PSMB1P20618 241 aaKnown RBP3.55□□□□□ -1.84
HMGB3P18-201ENST00000406327 FASP25445 335 aa3.55□□□□□ -1.84
HMGB3P18-201ENST00000406327 PRDX3P30048 256 aaKnown RBP3.55□□□□□ -1.84
HMGB3P18-201ENST00000406327 RRM2P31350 389 aa3.55□□□□□ -1.84
HMGB3P18-201ENST00000406327 GLP1RP43220 463 aa3.55□□□□□ -1.84
HMGB3P18-201ENST00000406327 MAGEA12P43365 314 aa3.55□□□□□ -1.84
HMGB3P18-201ENST00000406327 C21orf59P57076 290 aa3.55□□□□□ -1.84
HMGB3P18-201ENST00000406327 SELENOTP62341 195 aa3.55□□□□□ -1.84
HMGB3P18-201ENST00000406327 ZNF45Q02386 682 aa3.55□□□□□ -1.84
HMGB3P18-201ENST00000406327 ARHGAP19Q14CB8 494 aa3.55□□□□□ -1.84
HMGB3P18-201ENST00000406327 TCTEX1D4Q5JR98 221 aa3.55□□□□□ -1.84
HMGB3P18-201ENST00000406327 N4BP2L1Q5TBK1 243 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P18-201ENST00000406327 ANXA8L1Q5VT79 327 aa3.55□□□□□ -1.84
HMGB3P18-201ENST00000406327 C1orf146Q5VVC0 180 aa3.55□□□□□ -1.84
HMGB3P18-201ENST00000406327 KRTAP5-1Q6L8H4 278 aa3.55□□□□□ -1.84
HMGB3P18-201ENST00000406327 RWDD4Q6NW29 188 aaKnown RBP3.55□□□□□ -1.84
HMGB3P18-201ENST00000406327 Q6ZN92 141 aa3.55□□□□□ -1.84
HMGB3P18-201ENST00000406327 SCD5Q86SK9 330 aa3.55□□□□□ -1.84
HMGB3P18-201ENST00000406327 LINC00523Q86TU6 105 aa3.55□□□□□ -1.84
HMGB3P18-201ENST00000406327 TAC4Q86UU9 113 aa3.55□□□□□ -1.84
HMGB3P18-201ENST00000406327 DNAAF3Q8N9W5 541 aa3.55□□□□□ -1.84
HMGB3P18-201ENST00000406327 SDR9C7Q8NEX9 313 aa3.55□□□□□ -1.84
HMGB3P18-201ENST00000406327 OR51S1Q8NGJ8 323 aa3.55□□□□□ -1.84
HMGB3P18-201ENST00000406327 OR52K1Q8NGK4 314 aa3.55□□□□□ -1.84
HMGB3P18-201ENST00000406327 TYMSOSQ8TAI1 123 aa3.55□□□□□ -1.84
HMGB3P18-201ENST00000406327 BRSK1Q8TDC3 778 aa3.55□□□□□ -1.84
HMGB3P18-201ENST00000406327 ELMO1Q92556 727 aa3.55□□□□□ -1.84
HMGB3P18-201ENST00000406327 CERS2Q96G23 380 aa3.55□□□□□ -1.84
HMGB3P18-201ENST00000406327 KCTD14Q9BQ13 255 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P18-201ENST00000406327 EBF4Q9BQW3 602 aa3.55□□□□□ -1.84
HMGB3P18-201ENST00000406327 KIFC1Q9BW19 673 aa3.55□□□□□ -1.84
HMGB3P18-201ENST00000406327 DEFB126Q9BYW3 111 aa3.55□□□□□ -1.84
HMGB3P18-201ENST00000406327 C20orf27Q9GZN8 174 aa3.55□□□□□ -1.84
HMGB3P18-201ENST00000406327 IL22Q9GZX6 179 aa3.55□□□□□ -1.84
HMGB3P18-201ENST00000406327 TMEM185BQ9H7F4 350 aa3.55□□□□□ -1.84
HMGB3P18-201ENST00000406327 ZNF160Q9HCG1 818 aa3.55□□□□□ -1.84
HMGB3P18-201ENST00000406327 GIN1Q9NXP7 522 aa3.55□□□□□ -1.84
HMGB3P18-201ENST00000406327 IL37Q9NZH6 218 aa3.55□□□□□ -1.84
HMGB3P18-201ENST00000406327 CD274Q9NZQ7 290 aa3.55□□□□□ -1.84
HMGB3P18-201ENST00000406327 VANGL2Q9ULK5 521 aa3.55□□□□□ -1.84
HMGB3P18-201ENST00000406327 RPL26L1Q9UNX3 145 aaKnown RBP3.55□□□□□ -1.84
HMGB3P18-201ENST00000406327 STK38LQ9Y2H1 464 aa3.55□□□□□ -1.84
HMGB3P18-201ENST00000406327 SCN4AP35499 1836 aa3.55□□□□□ -1.84
HMGB3P18-201ENST00000406327 ZNF236Q9UL36 1845 aa3.55□□□□□ -1.84
HMGB3P18-201ENST00000406327 TRBV11-1A0A0K0K1C0 115 aa3.54□□□□□ -1.84
HMGB3P18-201ENST00000406327 GFYI3L273 518 aa3.54□□□□□ -1.84
HMGB3P18-201ENST00000406327 K7N7A8 449 aa3.54□□□□□ -1.84
HMGB3P18-201ENST00000406327 DFFAO00273 331 aa3.54□□□□□ -1.84
HMGB3P18-201ENST00000406327 TNFSF11O14788 317 aa3.54□□□□□ -1.84
HMGB3P18-201ENST00000406327 LSM1O15116 133 aaKnown RBP3.54□□□□□ -1.84
HMGB3P18-201ENST00000406327 CASC3O15234 703 aaKnown RBP3.54□□□□□ -1.84
HMGB3P18-201ENST00000406327 CCDC22O60826 627 aa3.54□□□□□ -1.84
HMGB3P18-201ENST00000406327 GAPDHP04406 335 aaKnown RBP3.54□□□□□ -1.84
HMGB3P18-201ENST00000406327 SERPINE1P05121 402 aa3.54□□□□□ -1.84
HMGB3P18-201ENST00000406327 OR4Q2P0C623 313 aa3.54□□□□□ -1.84
HMGB3P18-201ENST00000406327 NPR2P20594 1047 aa3.54□□□□□ -1.84
HMGB3P18-201ENST00000406327 AQP1P29972 269 aa3.54□□□□□ -1.84
HMGB3P18-201ENST00000406327 OR3A4PP47883 348 aa3.54□□□□□ -1.84
HMGB3P18-201ENST00000406327 ARRB1P49407 418 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P18-201ENST00000406327 GTF2A1P52655 376 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P18-201ENST00000406327 RPS15P62841 145 aaKnown RBP3.54□□□□□ -1.84
HMGB3P18-201ENST00000406327 CDH17Q12864 832 aa3.54□□□□□ -1.84
HMGB3P18-201ENST00000406327 ARFRP1Q13795 201 aa3.54□□□□□ -1.84
HMGB3P18-201ENST00000406327 ISXQ2M1V0 245 aa3.54□□□□□ -1.84
HMGB3P18-201ENST00000406327 CCDC153Q494R4 210 aa3.54□□□□□ -1.84
HMGB3P18-201ENST00000406327 CLLU1OSQ5K130 101 aa3.54□□□□□ -1.84
HMGB3P18-201ENST00000406327 GPRC6AQ5T6X5 926 aa3.54□□□□□ -1.84
HMGB3P18-201ENST00000406327 OR2G6Q5TZ20 316 aa3.54□□□□□ -1.84
HMGB3P18-201ENST00000406327 LUZP2Q86TE4 346 aa3.54□□□□□ -1.84
HMGB3P18-201ENST00000406327 CRLF3Q8IUI8 442 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms