RNA–Protein interactions for RNA: ENST00000405692.2

PDGFA-204, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-204ENST00000405692 FAM183AA6NL82 134 aa17.83■□□□□ 0.44
PDGFA-204ENST00000405692 SMAD7O15105 426 aaKnown RBP17.83■□□□□ 0.44
PDGFA-204ENST00000405692 PRODHO43272 600 aa17.83■□□□□ 0.44
PDGFA-204ENST00000405692 GLCEO94923 617 aa17.83■□□□□ 0.44
PDGFA-204ENST00000405692 CLUP10909 449 aa17.83■□□□□ 0.44
PDGFA-204ENST00000405692 DBPQ10586 325 aaPredicted RBP17.83■□□□□ 0.44
PDGFA-204ENST00000405692 MAD2L1BPQ15013 274 aaPredicted RBP17.83■□□□□ 0.44
PDGFA-204ENST00000405692 PTGES3Q15185 160 aaKnown RBP17.83■□□□□ 0.44
PDGFA-204ENST00000405692 SNAPC1Q16533 368 aa17.83■□□□□ 0.44
PDGFA-204ENST00000405692 PCGF3Q3KNV8 242 aa17.83■□□□□ 0.44
PDGFA-204ENST00000405692 ZMAT1Q5H9K5 638 aa17.83■□□□□ 0.44
PDGFA-204ENST00000405692 CFAP77Q6ZQR2 320 aa17.83■□□□□ 0.44
PDGFA-204ENST00000405692 ZCCHC24Q8N2G6 241 aaKnown RBP17.83■□□□□ 0.44
PDGFA-204ENST00000405692 ZNF540Q8NDQ6 660 aa17.83■□□□□ 0.44
PDGFA-204ENST00000405692 ZNRF4Q8WWF5 429 aa17.83■□□□□ 0.44
PDGFA-204ENST00000405692 SLC7A6Q92536 515 aa17.83■□□□□ 0.44
PDGFA-204ENST00000405692 PTP4A1Q93096 173 aa17.83■□□□□ 0.44
PDGFA-204ENST00000405692 SPTSSAQ969W0 71 aa17.83■□□□□ 0.44
PDGFA-204ENST00000405692 APOBEC3DQ96AK3 386 aaPredicted RBP17.83■□□□□ 0.44
PDGFA-204ENST00000405692 OR51V1Q9H2C8 321 aa17.83■□□□□ 0.44
PDGFA-204ENST00000405692 TPK1Q9H3S4 243 aa17.83■□□□□ 0.44
PDGFA-204ENST00000405692 ARFGEF3Q5TH69 2177 aa17.82■□□□□ 0.44
PDGFA-204ENST00000405692 RNF223E7ERA6 249 aa17.82■□□□□ 0.44
PDGFA-204ENST00000405692 ZNF593O00488 134 aaPredicted RBP17.82■□□□□ 0.44
PDGFA-204ENST00000405692 LY6HO94772 140 aa17.82■□□□□ 0.44
PDGFA-204ENST00000405692 SPARCP09486 303 aa17.82■□□□□ 0.44
PDGFA-204ENST00000405692 DAOP14920 347 aa17.82■□□□□ 0.44
PDGFA-204ENST00000405692 IGFBP5P24593 272 aa17.82■□□□□ 0.44
PDGFA-204ENST00000405692 GSTT1P30711 240 aa17.82■□□□□ 0.44
PDGFA-204ENST00000405692 TPTEP56180 551 aa17.82■□□□□ 0.44
PDGFA-204ENST00000405692 PCK2Q16822 640 aa17.82■□□□□ 0.44
PDGFA-204ENST00000405692 SLC35D3Q5M8T2 416 aa17.82■□□□□ 0.44
PDGFA-204ENST00000405692 TMEM236Q5W0B7 351 aa17.82■□□□□ 0.44
PDGFA-204ENST00000405692 PLBD1Q6P4A8 553 aa17.82■□□□□ 0.44
PDGFA-204ENST00000405692 SHFQ7M4L6 423 aa17.82■□□□□ 0.44
PDGFA-204ENST00000405692 CIARTQ8N365 385 aaPredicted RBP17.82■□□□□ 0.44
PDGFA-204ENST00000405692 ZNF511Q8NB15 262 aa17.82■□□□□ 0.44
PDGFA-204ENST00000405692 C10orf105Q8TEF2 133 aa17.82■□□□□ 0.44
PDGFA-204ENST00000405692 UBASH3BQ8TF42 649 aa17.82■□□□□ 0.44
PDGFA-204ENST00000405692 INTS14Q96SY0 518 aa17.82■□□□□ 0.44
PDGFA-204ENST00000405692 RBM4BQ9BQ04 359 aaKnown RBP17.82■□□□□ 0.44
PDGFA-204ENST00000405692 PIMREGQ9BSJ6 248 aa17.82■□□□□ 0.44
PDGFA-204ENST00000405692 MED20Q9H944 212 aa17.82■□□□□ 0.44
PDGFA-204ENST00000405692 WDR76Q9H967 626 aa17.82■□□□□ 0.44
PDGFA-204ENST00000405692 TVP23BQ9NYZ1 205 aa17.82■□□□□ 0.44
PDGFA-204ENST00000405692 OAZ3Q9UMX2 235 aa17.82■□□□□ 0.44
PDGFA-204ENST00000405692 IGHV4-30-2A0A087WSY4 118 aa17.81■□□□□ 0.44
PDGFA-204ENST00000405692 C17orf100A8MU93 164 aa17.81■□□□□ 0.44
PDGFA-204ENST00000405692 F5H5K5 113 aa17.81■□□□□ 0.44
PDGFA-204ENST00000405692 DBHP09172 617 aa17.81■□□□□ 0.44
PDGFA-204ENST00000405692 NAT2P11245 290 aa17.81■□□□□ 0.44
PDGFA-204ENST00000405692 CARTPTQ16568 116 aa17.81■□□□□ 0.44
PDGFA-204ENST00000405692 ALKBH6Q3KRA9 238 aa17.81■□□□□ 0.44
PDGFA-204ENST00000405692 KLHL12Q53G59 568 aa17.81■□□□□ 0.44
PDGFA-204ENST00000405692 LINC01590Q5TEZ4 76 aa17.81■□□□□ 0.44
PDGFA-204ENST00000405692 CXXC5Q7LFL8 322 aaKnown RBP17.81■□□□□ 0.44
PDGFA-204ENST00000405692 DCXRQ7Z4W1 244 aa17.81■□□□□ 0.44
PDGFA-204ENST00000405692 CPOQ8IVL8 374 aa17.81■□□□□ 0.44
PDGFA-204ENST00000405692 MAP6Q96JE9 813 aa17.81■□□□□ 0.44
PDGFA-204ENST00000405692 HCAR1Q9BXC0 346 aa17.81■□□□□ 0.44
PDGFA-204ENST00000405692 NKIRAS2Q9NYR9 191 aa17.81■□□□□ 0.44
PDGFA-204ENST00000405692 STARD10Q9Y365 291 aa17.81■□□□□ 0.44
PDGFA-204ENST00000405692 MED13LQ71F56 2210 aa17.81■□□□□ 0.44
PDGFA-204ENST00000405692 CELSR1Q9NYQ6 3014 aa17.8■□□□□ 0.44
PDGFA-204ENST00000405692 MPV17P39210 176 aa17.8■□□□□ 0.44
PDGFA-204ENST00000405692 ZNF81P51508 661 aa17.8■□□□□ 0.44
PDGFA-204ENST00000405692 TAF13Q15543 124 aa17.8■□□□□ 0.44
PDGFA-204ENST00000405692 LYPD4Q6UWN0 246 aa17.8■□□□□ 0.44
PDGFA-204ENST00000405692 ERI1Q8IV48 349 aaKnown RBP17.8■□□□□ 0.44
PDGFA-204ENST00000405692 ZNF786Q8N393 782 aa17.8■□□□□ 0.44
PDGFA-204ENST00000405692 OR6N2Q8NGY6 317 aa17.8■□□□□ 0.44
PDGFA-204ENST00000405692 DIRC2Q96SL1 478 aa17.8■□□□□ 0.44
PDGFA-204ENST00000405692 PKP2Q99959 881 aa17.8■□□□□ 0.44
PDGFA-204ENST00000405692 MARCH7Q9H992 704 aa17.8■□□□□ 0.44
PDGFA-204ENST00000405692 PNRC2Q9NPJ4 139 aaKnown RBP17.8■□□□□ 0.44
PDGFA-204ENST00000405692 DDX28Q9NUL7 540 aaKnown RBP17.8■□□□□ 0.44
PDGFA-204ENST00000405692 ORC6Q9Y5N6 252 aa17.8■□□□□ 0.44
PDGFA-204ENST00000405692 SAC3D1A6NKF1 404 aa17.79■□□□□ 0.44
PDGFA-204ENST00000405692 H3BNX3 289 aa17.79■□□□□ 0.44
PDGFA-204ENST00000405692 TIMM8AO60220 97 aaPredicted RBP17.79■□□□□ 0.44
PDGFA-204ENST00000405692 MITFO75030 526 aaPredicted RBP17.79■□□□□ 0.44
PDGFA-204ENST00000405692 RAC2P15153 192 aa17.79■□□□□ 0.44
PDGFA-204ENST00000405692 RPS27P42677 84 aaKnown RBP17.79■□□□□ 0.44
PDGFA-204ENST00000405692 SLC15A1P46059 708 aa17.79■□□□□ 0.44
PDGFA-204ENST00000405692 RPS7P62081 194 aaKnown RBP17.79■□□□□ 0.44
PDGFA-204ENST00000405692 MRPS11P82912 194 aaKnown RBP17.79■□□□□ 0.44
PDGFA-204ENST00000405692 MALLQ13021 153 aa17.79■□□□□ 0.44
PDGFA-204ENST00000405692 KRTAP27-1Q3LI81 207 aa17.79■□□□□ 0.44
PDGFA-204ENST00000405692 FAM209AQ5JX71 171 aa17.79■□□□□ 0.44
PDGFA-204ENST00000405692 CLEC9AQ6UXN8 241 aa17.79■□□□□ 0.44
PDGFA-204ENST00000405692 CIB1Q99828 191 aa17.79■□□□□ 0.44
PDGFA-204ENST00000405692 COPS4Q9BT78 406 aa17.79■□□□□ 0.44
PDGFA-204ENST00000405692 C1QTNF5Q9BXJ0 243 aa17.79■□□□□ 0.44
PDGFA-204ENST00000405692 DECR2Q9NUI1 292 aa17.79■□□□□ 0.44
PDGFA-204ENST00000405692 MAP1AP78559 2803 aaPredicted RBP17.79■□□□□ 0.44
PDGFA-204ENST00000405692 ZAR1LA6NP61 321 aa17.78■□□□□ 0.44
PDGFA-204ENST00000405692 ZNF878C9JN71 531 aa17.78■□□□□ 0.44
PDGFA-204ENST00000405692 M0R135 149 aa17.78■□□□□ 0.44
PDGFA-204ENST00000405692 ACSM4P0C7M7 580 aa17.78■□□□□ 0.44
PDGFA-204ENST00000405692 KITLGP21583 273 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms