RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 GNG14A0A1W2PPG7 69 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 SAP18O00422 153 aaKnown RBP3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 EI24O14681 340 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 ANGPT2O15123 496 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 SCAMP2O15127 329 aaKnown RBP3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 CFLARO15519 480 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 ERI3O43414 337 aaKnown RBP3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 HCRTR1O43613 425 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 GPRIN2O60269 458 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 EEDO75530 441 aaKnown RBP3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 OR2B3O76000 313 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 ECDO95905 644 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 IL6P05231 212 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 KLK1P06870 262 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 IFI6P09912 130 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 COX4I1P13073 169 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 FOLR1P15328 257 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 IL10P22301 178 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 S100A3P33764 101 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 HPCAL1P37235 193 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 SLC6A8P48029 635 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 TRPC1P48995 793 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 POLR2JP52435 117 aaKnown RBP3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 PLA2G16P53816 162 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 MYBPC1Q00872 1141 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 NAAAQ02083 359 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 ZNF85Q03923 595 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 C2orf80Q0P641 193 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 SLAMF1Q13291 335 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 BIKQ13323 160 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 GAMTQ14353 236 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 C16orf72Q14CZ0 275 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 CEBPEQ15744 281 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 CD226Q15762 336 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 ZSCAN26Q16670 478 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 ISXQ2M1V0 245 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 CNPY1Q3B7I2 92 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 SLC22A6Q4U2R8 563 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 TOR1AIP1Q5JTV8 583 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 FAM71E1Q6IPT2 247 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 PRMT9Q6P2P2 845 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 ZCCHC12Q6PEW1 402 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 FAM159AQ6UWV7 190 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 HACD2Q6Y1H2 254 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 CCDC121Q6ZUS5 278 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 ASCL5Q7RTU5 278 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 KDM8Q8N371 416 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 LIX1Q8N485 282 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 TYMSOSQ8TAI1 123 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 C16orf78Q8WTQ4 265 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 N4BP2L2Q92802 583 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 ROPN1LQ96C74 230 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 TM4SF18Q96CE8 201 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 RBM18Q96H35 190 aaKnown RBP3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 SAMD8Q96LT4 415 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 TSSK3Q96PN8 268 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 ZBTB18Q99592 522 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 C1orf50Q9BV19 199 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 FAIM2Q9BWQ8 316 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 C1orf21Q9H246 121 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 CLMPQ9H6B4 373 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 REEP4Q9H6H4 257 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 EFCAB1Q9HAE3 211 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 ANKHQ9HCJ1 492 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 ESM1Q9NQ30 184 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 FAM120CQ9NX05 1096 aaKnown RBP3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 CLEC5AQ9NY25 188 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 ATP6V1HQ9UI12 483 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 PSME2Q9UL46 239 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 NDUFAF1Q9Y375 327 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 ASB4Q9Y574 426 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 SPACA6W5XKT8 324 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 MED13Q9UHV7 2174 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 EML6Q6ZMW3 1958 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 C15orf38-AP3S2A0A0A6YYH1 394 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 RNF103-CHMP3A0A140T963 221 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 A0A1B0GX78 115 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 TRABD2BA6NFA1 517 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 GABRR3A8MPY1 467 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 C4orf51C9J302 202 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 POLR1CO15160 346 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 CASC3O15234 703 aaKnown RBP3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 SCN2BO60939 215 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 PDE5AO76074 875 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 STK17BO94768 372 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 KIAA0754O94854 1291 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 PTBP3O95758 552 aaKnown RBP3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 IGHV3-9P01782 118 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 IL3P08700 152 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 WNT2P09544 360 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 RNH1P13489 461 aaKnown RBP3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 IL1RNP18510 177 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 IL12AP29459 219 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 PRDX2P32119 198 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 RORAP35398 523 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 ARHGDIAP52565 204 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 LIM2P55344 173 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 RAB38P57729 211 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 SLC26A5P58743 744 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms