RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 HHLA2Q9UM44 414 aa22.53■■□□□ 1.2
CPNE1-205ENST00000401607 A0A1B0GVC2 190 aa22.53■■□□□ 1.2
CPNE1-205ENST00000401607 P2RY10O00398 339 aa22.53■■□□□ 1.2
CPNE1-205ENST00000401607 TGM6O95932 706 aa22.53■■□□□ 1.2
CPNE1-205ENST00000401607 IGHV3-9P01782 118 aa22.53■■□□□ 1.2
CPNE1-205ENST00000401607 YES1P07947 543 aa22.53■■□□□ 1.2
CPNE1-205ENST00000401607 ACSM4P0C7M7 580 aa22.53■■□□□ 1.2
CPNE1-205ENST00000401607 B4GALT1P15291 398 aa22.53■■□□□ 1.2
CPNE1-205ENST00000401607 GRB2P62993 217 aaKnown RBP22.53■■□□□ 1.2
CPNE1-205ENST00000401607 TMEM244Q5VVB8 128 aa22.53■■□□□ 1.2
CPNE1-205ENST00000401607 SPACA3Q8IXA5 215 aa22.53■■□□□ 1.2
CPNE1-205ENST00000401607 ZNF433Q8N7K0 673 aaPredicted RBP22.53■■□□□ 1.2
CPNE1-205ENST00000401607 TRMT10AQ8TBZ6 339 aaKnown RBP22.53■■□□□ 1.2
CPNE1-205ENST00000401607 TAAR6Q96RI8 345 aa22.53■■□□□ 1.2
CPNE1-205ENST00000401607 SH3GL3Q99963 347 aa22.53■■□□□ 1.2
CPNE1-205ENST00000401607 SRRQ9GZT4 340 aa22.53■■□□□ 1.2
CPNE1-205ENST00000401607 MOB1AQ9H8S9 216 aa22.53■■□□□ 1.2
CPNE1-205ENST00000401607 NCOA6Q14686 2063 aaPredicted RBP22.52■■□□□ 1.2
CPNE1-205ENST00000401607 A0A0B4J203 849 aa22.52■■□□□ 1.2
CPNE1-205ENST00000401607 FABP12A6NFH5 140 aa22.52■■□□□ 1.2
CPNE1-205ENST00000401607 SLC19A2O60779 497 aa22.52■■□□□ 1.2
CPNE1-205ENST00000401607 CST2P09228 141 aa22.52■■□□□ 1.2
CPNE1-205ENST00000401607 ANOS1P23352 680 aa22.52■■□□□ 1.2
CPNE1-205ENST00000401607 CTSSP25774 331 aa22.52■■□□□ 1.2
CPNE1-205ENST00000401607 EVX1P49640 407 aa22.52■■□□□ 1.2
CPNE1-205ENST00000401607 ZNF121P58317 390 aaPredicted RBP22.52■■□□□ 1.2
CPNE1-205ENST00000401607 ZNF181Q2M3W8 571 aa22.52■■□□□ 1.2
CPNE1-205ENST00000401607 FAM131AQ6UXB0 335 aa22.52■■□□□ 1.2
CPNE1-205ENST00000401607 LYSMD2Q8IV50 215 aa22.52■■□□□ 1.2
CPNE1-205ENST00000401607 SOSTQ9BQB4 213 aa22.52■■□□□ 1.2
CPNE1-205ENST00000401607 SLC5A6Q9Y289 635 aa22.52■■□□□ 1.2
CPNE1-205ENST00000401607 V9GY05 133 aa22.52■■□□□ 1.2
CPNE1-205ENST00000401607 ZNF12P17014 697 aa22.51■■□□□ 1.19
CPNE1-205ENST00000401607 ELK1P19419 428 aa22.51■■□□□ 1.19
CPNE1-205ENST00000401607 CX3CR1P49238 355 aa22.51■■□□□ 1.19
CPNE1-205ENST00000401607 Q6ZS92 163 aa22.51■■□□□ 1.19
CPNE1-205ENST00000401607 SIAH3Q8IW03 269 aa22.51■■□□□ 1.19
CPNE1-205ENST00000401607 OR5H6Q8NGV6 325 aa22.51■■□□□ 1.19
CPNE1-205ENST00000401607 KCNJ15Q99712 375 aa22.51■■□□□ 1.19
CPNE1-205ENST00000401607 CCDC32Q9BV29 185 aa22.51■■□□□ 1.19
CPNE1-205ENST00000401607 ABRACLQ9P1F3 81 aa22.51■■□□□ 1.19
CPNE1-205ENST00000401607 SLC22A20A6NK97 555 aa22.5■■□□□ 1.19
CPNE1-205ENST00000401607 IFITM5A6NNB3 132 aa22.5■■□□□ 1.19
CPNE1-205ENST00000401607 K7EM74 188 aa22.5■■□□□ 1.19
CPNE1-205ENST00000401607 AIPO00170 330 aa22.5■■□□□ 1.19
CPNE1-205ENST00000401607 AQP7O14520 342 aa22.5■■□□□ 1.19
CPNE1-205ENST00000401607 SNRPBP14678 240 aaKnown RBP22.5■■□□□ 1.19
CPNE1-205ENST00000401607 RGS21Q2M5E4 152 aa22.5■■□□□ 1.19
CPNE1-205ENST00000401607 ELFN2Q5R3F8 820 aa22.5■■□□□ 1.19
CPNE1-205ENST00000401607 STEAP3Q658P3 488 aa22.5■■□□□ 1.19
CPNE1-205ENST00000401607 MCEMP1Q8IX19 187 aa22.5■■□□□ 1.19
CPNE1-205ENST00000401607 ADAM30Q9UKF2 790 aa22.5■■□□□ 1.19
CPNE1-205ENST00000401607 ZNF175Q9Y473 711 aa22.5■■□□□ 1.19
CPNE1-205ENST00000401607 KRT33AO76009 404 aa22.5■■□□□ 1.19
CPNE1-205ENST00000401607 MAS1P04201 325 aa22.5■■□□□ 1.19
CPNE1-205ENST00000401607 EIF4EP06730 217 aaKnown RBP22.5■■□□□ 1.19
CPNE1-205ENST00000401607 SLC2A1P11166 492 aa22.5■■□□□ 1.19
CPNE1-205ENST00000401607 AZGP1P25311 298 aaKnown RBP22.5■■□□□ 1.19
CPNE1-205ENST00000401607 RSPO1Q2MKA7 263 aaPredicted RBP22.5■■□□□ 1.19
CPNE1-205ENST00000401607 HES5Q5TA89 166 aa22.5■■□□□ 1.19
CPNE1-205ENST00000401607 PRSS45Q7RTY3 260 aa22.5■■□□□ 1.19
CPNE1-205ENST00000401607 NUFIP2Q7Z417 695 aaKnown RBP22.5■■□□□ 1.19
CPNE1-205ENST00000401607 SLC22A24Q8N4F4 322 aa22.5■■□□□ 1.19
CPNE1-205ENST00000401607 ZNF283Q8N7M2 679 aa22.5■■□□□ 1.19
CPNE1-205ENST00000401607 SAMD12Q8N8I0 201 aa22.5■■□□□ 1.19
CPNE1-205ENST00000401607 DNAAF1Q8NEP3 725 aa22.5■■□□□ 1.19
CPNE1-205ENST00000401607 OR13C3Q8NGS6 347 aa22.5■■□□□ 1.19
CPNE1-205ENST00000401607 PLSCR2Q9NRY7 297 aa22.5■■□□□ 1.19
CPNE1-205ENST00000401607 CFAP47Q6ZTR5 3102 aa22.5■■□□□ 1.19
CPNE1-205ENST00000401607 ZNHIT1O43257 154 aa22.49■■□□□ 1.19
CPNE1-205ENST00000401607 LMX1BO60663 402 aa22.49■■□□□ 1.19
CPNE1-205ENST00000401607 GALK2Q01415 458 aa22.49■■□□□ 1.19
CPNE1-205ENST00000401607 MADCAM1Q13477 382 aa22.49■■□□□ 1.19
CPNE1-205ENST00000401607 ADGRE4PQ86SQ3 457 aa22.49■■□□□ 1.19
CPNE1-205ENST00000401607 OR8B12Q8NGG6 310 aa22.49■■□□□ 1.19
CPNE1-205ENST00000401607 CHPT1Q8WUD6 406 aa22.49■■□□□ 1.19
CPNE1-205ENST00000401607 PLEK2Q9NYT0 353 aa22.49■■□□□ 1.19
CPNE1-205ENST00000401607 ZNF319Q9P2F9 582 aa22.49■■□□□ 1.19
CPNE1-205ENST00000401607 OR6C65A6NJZ3 312 aa22.48■■□□□ 1.19
CPNE1-205ENST00000401607 RPL36A-HNRNPH2H7BZ11 118 aa22.48■■□□□ 1.19
CPNE1-205ENST00000401607 CD2P06729 351 aa22.48■■□□□ 1.19
CPNE1-205ENST00000401607 FSTP19883 344 aa22.48■■□□□ 1.19
CPNE1-205ENST00000401607 OTX1P32242 354 aaPredicted RBP22.48■■□□□ 1.19
CPNE1-205ENST00000401607 XKRXQ6PP77 449 aa22.48■■□□□ 1.19
CPNE1-205ENST00000401607 METAP1DQ6UB28 335 aaPredicted RBP22.48■■□□□ 1.19
CPNE1-205ENST00000401607 LRRC28Q86X40 367 aaPredicted RBP22.48■■□□□ 1.19
CPNE1-205ENST00000401607 RBMXL3Q8N7X1 1067 aaKnown RBP22.48■■□□□ 1.19
CPNE1-205ENST00000401607 APH1AQ96BI3 265 aa22.48■■□□□ 1.19
CPNE1-205ENST00000401607 MALT1Q9UDY8 824 aa22.48■■□□□ 1.19
CPNE1-205ENST00000401607 A0A1B0GTI1 187 aa22.48■■□□□ 1.19
CPNE1-205ENST00000401607 FAM25AB3EWG3 89 aa22.48■■□□□ 1.19
CPNE1-205ENST00000401607 FAM25CB3EWG5 89 aa22.48■■□□□ 1.19
CPNE1-205ENST00000401607 FAM25GB3EWG6 89 aa22.48■■□□□ 1.19
CPNE1-205ENST00000401607 IGFBP3P17936 291 aaPredicted RBP22.48■■□□□ 1.19
CPNE1-205ENST00000401607 STK11Q15831 433 aa22.48■■□□□ 1.19
CPNE1-205ENST00000401607 PPP1R3EQ9H7J1 279 aa22.48■■□□□ 1.19
CPNE1-205ENST00000401607 CYSLTR2Q9NS75 346 aa22.48■■□□□ 1.19
CPNE1-205ENST00000401607 C14orf119Q9NWQ9 140 aa22.48■■□□□ 1.19
CPNE1-205ENST00000401607 TAS2R4Q9NYW5 299 aa22.48■■□□□ 1.19
CPNE1-205ENST00000401607 CLCF1Q9UBD9 225 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms