RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 LIPHQ8WWY8 451 aa12.55□□□□□ -0.4
APOB-202ENST00000399256 ZNF304Q9HCX3 659 aa12.55□□□□□ -0.4
APOB-202ENST00000399256 ACKR4Q9NPB9 350 aa12.55□□□□□ -0.4
APOB-202ENST00000399256 PRR13Q9NZ81 148 aa12.55□□□□□ -0.4
APOB-202ENST00000399256 MSGN1A6NI15 193 aa12.54□□□□□ -0.4
APOB-202ENST00000399256 TTLL8A6PVC2 850 aa12.54□□□□□ -0.4
APOB-202ENST00000399256 LDLRAD4O15165 306 aa12.54□□□□□ -0.4
APOB-202ENST00000399256 GUSBP08236 651 aa12.54□□□□□ -0.4
APOB-202ENST00000399256 IFI6P09912 130 aa12.54□□□□□ -0.4
APOB-202ENST00000399256 MAOAP21397 527 aa12.54□□□□□ -0.4
APOB-202ENST00000399256 PJVKQ0ZLH3 352 aa12.54□□□□□ -0.4
APOB-202ENST00000399256 RAB30Q15771 203 aa12.54□□□□□ -0.4
APOB-202ENST00000399256 SMAD2Q15796 467 aaKnown RBP12.54□□□□□ -0.4
APOB-202ENST00000399256 TEX30Q5JUR7 227 aa12.54□□□□□ -0.4
APOB-202ENST00000399256 MED25Q71SY5 747 aa12.54□□□□□ -0.4
APOB-202ENST00000399256 RSC1A1Q92681 617 aa12.54□□□□□ -0.4
APOB-202ENST00000399256 DGAT2Q96PD7 388 aa12.54□□□□□ -0.4
APOB-202ENST00000399256 NRIP2Q9BQI9 281 aa12.54□□□□□ -0.4
APOB-202ENST00000399256 RNF126Q9BV68 326 aa12.54□□□□□ -0.4
APOB-202ENST00000399256 OR10A5Q9H207 317 aa12.54□□□□□ -0.4
APOB-202ENST00000399256 FN3KRPQ9HA64 309 aa12.54□□□□□ -0.4
APOB-202ENST00000399256 MRPL22Q9NWU5 206 aaKnown RBP12.54□□□□□ -0.4
APOB-202ENST00000399256 CACNA1IQ9P0X4 2223 aa12.54□□□□□ -0.4
APOB-202ENST00000399256 HSPB2A8KAH6 182 aa12.54□□□□□ -0.4
APOB-202ENST00000399256 C17orf51A8MQB3 221 aa12.54□□□□□ -0.4
APOB-202ENST00000399256 EFSO43281 561 aa12.54□□□□□ -0.4
APOB-202ENST00000399256 FAM157CP0CG43 387 aa12.54□□□□□ -0.4
APOB-202ENST00000399256 ST6GAL1P15907 406 aa12.54□□□□□ -0.4
APOB-202ENST00000399256 ARRB1P49407 418 aaPredicted RBP12.54□□□□□ -0.4
APOB-202ENST00000399256 SKP2Q13309 424 aa12.54□□□□□ -0.4
APOB-202ENST00000399256 HSPB2Q16082 182 aa12.54□□□□□ -0.4
APOB-202ENST00000399256 ZNF776Q68DI1 518 aaPredicted RBP12.54□□□□□ -0.4
APOB-202ENST00000399256 ZDHHC22Q8N966 263 aa12.54□□□□□ -0.4
APOB-202ENST00000399256 SLC25A36Q96CQ1 311 aa12.54□□□□□ -0.4
APOB-202ENST00000399256 FAM60AQ9NP50 221 aa12.54□□□□□ -0.4
APOB-202ENST00000399256 HRASLS2Q9NWW9 162 aa12.54□□□□□ -0.4
APOB-202ENST00000399256 SLC2A8Q9NY64 477 aa12.54□□□□□ -0.4
APOB-202ENST00000399256 GDF2Q9UK05 429 aaPredicted RBP12.54□□□□□ -0.4
APOB-202ENST00000399256 EMC9Q9Y3B6 208 aa12.54□□□□□ -0.4
APOB-202ENST00000399256 LRP12Q9Y561 859 aa12.54□□□□□ -0.4
APOB-202ENST00000399256 H0YIZ8 118 aa12.53□□□□□ -0.4
APOB-202ENST00000399256 EIF1AYO14602 144 aaKnown RBP12.53□□□□□ -0.4
APOB-202ENST00000399256 PLRG1O43660 514 aaKnown RBP12.53□□□□□ -0.4
APOB-202ENST00000399256 PMP2P02689 132 aa12.53□□□□□ -0.4
APOB-202ENST00000399256 ZNF806P0C7X5 589 aa12.53□□□□□ -0.4
APOB-202ENST00000399256 EIF1AXP47813 144 aaKnown RBP12.53□□□□□ -0.4
APOB-202ENST00000399256 RIDAP52758 137 aaKnown RBP12.53□□□□□ -0.4
APOB-202ENST00000399256 PEA15Q15121 130 aa12.53□□□□□ -0.4
APOB-202ENST00000399256 ZNF585AQ6P3V2 769 aa12.53□□□□□ -0.4
APOB-202ENST00000399256 CHRDL2Q6WN34 429 aa12.53□□□□□ -0.4
APOB-202ENST00000399256 ETV3LQ6ZN32 361 aa12.53□□□□□ -0.4
APOB-202ENST00000399256 SLC29A4Q7RTT9 530 aa12.53□□□□□ -0.4
APOB-202ENST00000399256 PARGQ86W56 976 aa12.53□□□□□ -0.4
APOB-202ENST00000399256 CATSPERDQ86XM0 798 aa12.53□□□□□ -0.4
APOB-202ENST00000399256 ZNF440Q8IYI8 595 aa12.53□□□□□ -0.4
APOB-202ENST00000399256 MARCH1Q8TCQ1 289 aa12.53□□□□□ -0.4
APOB-202ENST00000399256 AQP3Q92482 292 aa12.53□□□□□ -0.4
APOB-202ENST00000399256 RHOFQ9HBH0 211 aa12.53□□□□□ -0.4
APOB-202ENST00000399256 RCC2Q9P258 522 aaKnown RBP12.53□□□□□ -0.4
APOB-202ENST00000399256 MRPS33Q9Y291 106 aaKnown RBP12.53□□□□□ -0.4
APOB-202ENST00000399256 AGPAT2O15120 278 aa12.53□□□□□ -0.4
APOB-202ENST00000399256 HABP2Q14520 560 aaPredicted RBP12.53□□□□□ -0.4
APOB-202ENST00000399256 ZNF260Q3ZCT1 412 aa12.53□□□□□ -0.4
APOB-202ENST00000399256 METTL21AQ8WXB1 218 aa12.53□□□□□ -0.4
APOB-202ENST00000399256 ASB17Q8WXJ9 295 aa12.53□□□□□ -0.4
APOB-202ENST00000399256 ABHD6Q9BV23 337 aa12.53□□□□□ -0.4
APOB-202ENST00000399256 C2orf74A8MZ97 194 aa12.53□□□□□ -0.4
APOB-202ENST00000399256 MPZL1O95297 269 aa12.53□□□□□ -0.4
APOB-202ENST00000399256 DUS4LO95620 317 aaKnown RBP12.53□□□□□ -0.4
APOB-202ENST00000399256 POU2F2P09086 479 aa12.53□□□□□ -0.4
APOB-202ENST00000399256 AKR1C3P42330 323 aa12.53□□□□□ -0.4
APOB-202ENST00000399256 GPR3P46089 330 aa12.53□□□□□ -0.4
APOB-202ENST00000399256 BIKQ13323 160 aa12.53□□□□□ -0.4
APOB-202ENST00000399256 FAM209BQ5JX69 171 aa12.53□□□□□ -0.4
APOB-202ENST00000399256 TANGO2Q6ICL3 276 aa12.53□□□□□ -0.4
APOB-202ENST00000399256 FAM160A2Q8N612 972 aaPredicted RBP12.53□□□□□ -0.4
APOB-202ENST00000399256 NUBPLQ8TB37 319 aa12.53□□□□□ -0.4
APOB-202ENST00000399256 ZNF107Q9UII5 783 aaPredicted RBP12.53□□□□□ -0.4
APOB-202ENST00000399256 LOC107986453A0A1B0GWG9 222 aa12.52□□□□□ -0.4
APOB-202ENST00000399256 ICOSLGO75144 302 aa12.52□□□□□ -0.4
APOB-202ENST00000399256 FABP1P07148 127 aa12.52□□□□□ -0.4
APOB-202ENST00000399256 SFTA3P0C7M3 94 aa12.52□□□□□ -0.4
APOB-202ENST00000399256 GNB3P16520 340 aa12.52□□□□□ -0.4
APOB-202ENST00000399256 RUNX3Q13761 415 aa12.52□□□□□ -0.4
APOB-202ENST00000399256 ELAVL1Q15717 326 aaKnown RBP12.52□□□□□ -0.4
APOB-202ENST00000399256 IL34Q6ZMJ4 242 aa12.52□□□□□ -0.4
APOB-202ENST00000399256 METTL27Q8N6F8 245 aaPredicted RBP12.52□□□□□ -0.4
APOB-202ENST00000399256 LINC00469Q8N7U9 141 aa12.52□□□□□ -0.4
APOB-202ENST00000399256 C8orf44Q96CB5 159 aa12.52□□□□□ -0.4
APOB-202ENST00000399256 FBXO17Q96EF6 278 aa12.52□□□□□ -0.4
APOB-202ENST00000399256 LPAR3Q9UBY5 353 aa12.52□□□□□ -0.4
APOB-202ENST00000399256 ARHGEF17Q96PE2 2063 aaPredicted RBP12.52□□□□□ -0.41
APOB-202ENST00000399256 TRAV20A0A0B4J274 112 aa12.52□□□□□ -0.41
APOB-202ENST00000399256 A0A0J9YY10 115 aa12.52□□□□□ -0.41
APOB-202ENST00000399256 LOC101059948A0A1B0GTJ6 334 aa12.52□□□□□ -0.41
APOB-202ENST00000399256 A6NCN8 305 aa12.52□□□□□ -0.41
APOB-202ENST00000399256 COLCA2A8K830 154 aa12.52□□□□□ -0.41
APOB-202ENST00000399256 RAB27BO00194 218 aa12.52□□□□□ -0.41
APOB-202ENST00000399256 ADAP1O75689 374 aa12.52□□□□□ -0.41
APOB-202ENST00000399256 WISP1O95388 367 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms