RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 ACSM4P0C7M7 580 aa10.7□□□□□ -0.7
HLA-DQB1-203ENST00000399082 NR4A1P22736 598 aa10.7□□□□□ -0.7
HLA-DQB1-203ENST00000399082 APLNRP35414 380 aa10.7□□□□□ -0.7
HLA-DQB1-203ENST00000399082 OPRL1P41146 370 aa10.7□□□□□ -0.7
HLA-DQB1-203ENST00000399082 SLC15A1P46059 708 aa10.7□□□□□ -0.7
HLA-DQB1-203ENST00000399082 MTNR1AP48039 350 aa10.7□□□□□ -0.7
HLA-DQB1-203ENST00000399082 GDI2P50395 445 aaKnown RBP10.7□□□□□ -0.7
HLA-DQB1-203ENST00000399082 ERVS71-1P61550 626 aa10.7□□□□□ -0.7
HLA-DQB1-203ENST00000399082 CDK5R2Q13319 367 aa10.7□□□□□ -0.7
HLA-DQB1-203ENST00000399082 TMED1Q13445 227 aa10.7□□□□□ -0.7
HLA-DQB1-203ENST00000399082 TBC1D28Q2M2D7 210 aa10.7□□□□□ -0.7
HLA-DQB1-203ENST00000399082 TMEM255AQ5JRV8 349 aa10.7□□□□□ -0.7
HLA-DQB1-203ENST00000399082 KRT80Q6KB66 452 aa10.7□□□□□ -0.7
HLA-DQB1-203ENST00000399082 SPATC1Q76KD6 591 aa10.7□□□□□ -0.7
HLA-DQB1-203ENST00000399082 NAA40Q86UY6 237 aa10.7□□□□□ -0.7
HLA-DQB1-203ENST00000399082 SLC35F2Q8IXU6 374 aa10.7□□□□□ -0.7
HLA-DQB1-203ENST00000399082 ALDH16A1Q8IZ83 802 aa10.7□□□□□ -0.7
HLA-DQB1-203ENST00000399082 C8orf59Q8N0T1 100 aaPredicted RBP10.7□□□□□ -0.7
HLA-DQB1-203ENST00000399082 SETD9Q8NE22 299 aa10.7□□□□□ -0.7
HLA-DQB1-203ENST00000399082 NUP37Q8NFH4 326 aa10.7□□□□□ -0.7
HLA-DQB1-203ENST00000399082 IGFBPL1Q8WX77 278 aa10.7□□□□□ -0.7
HLA-DQB1-203ENST00000399082 RFKQ969G6 155 aa10.7□□□□□ -0.7
HLA-DQB1-203ENST00000399082 LGALS12Q96DT0 336 aa10.7□□□□□ -0.7
HLA-DQB1-203ENST00000399082 RNFT2Q96EX2 444 aa10.7□□□□□ -0.7
HLA-DQB1-203ENST00000399082 RADILQ96JH8 1075 aa10.7□□□□□ -0.7
HLA-DQB1-203ENST00000399082 ANKRD60Q9BZ19 345 aa10.7□□□□□ -0.7
HLA-DQB1-203ENST00000399082 TTTY10Q9BZA0 68 aa10.7□□□□□ -0.7
HLA-DQB1-203ENST00000399082 POFUT1Q9H488 388 aa10.7□□□□□ -0.7
HLA-DQB1-203ENST00000399082 CDH20Q9HBT6 801 aa10.7□□□□□ -0.7
HLA-DQB1-203ENST00000399082 MRPS18AQ9NVS2 196 aaKnown RBP10.7□□□□□ -0.7
HLA-DQB1-203ENST00000399082 CLN6Q9NWW5 311 aa10.7□□□□□ -0.7
HLA-DQB1-203ENST00000399082 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.7□□□□□ -0.7
HLA-DQB1-203ENST00000399082 EXOGQ9Y2C4 368 aaKnown RBP10.7□□□□□ -0.7
HLA-DQB1-203ENST00000399082 ATP23Q9Y6H3 246 aa10.7□□□□□ -0.7
HLA-DQB1-203ENST00000399082 HSPE1-MOB4S4R3N1 261 aa10.7□□□□□ -0.7
HLA-DQB1-203ENST00000399082 POLQO75417 2590 aa10.69□□□□□ -0.7
HLA-DQB1-203ENST00000399082 ZNF878C9JN71 531 aa10.69□□□□□ -0.7
HLA-DQB1-203ENST00000399082 MAGEB4O15481 346 aaPredicted RBP10.69□□□□□ -0.7
HLA-DQB1-203ENST00000399082 TMCC2O75069 709 aa10.69□□□□□ -0.7
HLA-DQB1-203ENST00000399082 DANCRP0C864 163 aa10.69□□□□□ -0.7
HLA-DQB1-203ENST00000399082 FAM157BP0CG42 384 aa10.69□□□□□ -0.7
HLA-DQB1-203ENST00000399082 CCNOP22674 350 aa10.69□□□□□ -0.7
HLA-DQB1-203ENST00000399082 MYF6P23409 242 aa10.69□□□□□ -0.7
HLA-DQB1-203ENST00000399082 THBS4P35443 961 aa10.69□□□□□ -0.7
HLA-DQB1-203ENST00000399082 ZNF85Q03923 595 aa10.69□□□□□ -0.7
HLA-DQB1-203ENST00000399082 SNTB2Q13425 540 aaKnown RBP10.69□□□□□ -0.7
HLA-DQB1-203ENST00000399082 SNCBQ16143 134 aa10.69□□□□□ -0.7
HLA-DQB1-203ENST00000399082 ZNF684Q5T5D7 378 aa10.69□□□□□ -0.7
HLA-DQB1-203ENST00000399082 LRRN1Q6UXK5 716 aa10.69□□□□□ -0.7
HLA-DQB1-203ENST00000399082 COLCA1Q6ZS62 124 aa10.69□□□□□ -0.7
HLA-DQB1-203ENST00000399082 THAP5Q7Z6K1 395 aa10.69□□□□□ -0.7
HLA-DQB1-203ENST00000399082 ZNF454Q8N9F8 522 aa10.69□□□□□ -0.7
HLA-DQB1-203ENST00000399082 OR1J2Q8NGS2 313 aa10.69□□□□□ -0.7
HLA-DQB1-203ENST00000399082 THEM6Q8WUY1 208 aa10.69□□□□□ -0.7
HLA-DQB1-203ENST00000399082 TMEM171Q8WVE6 324 aa10.69□□□□□ -0.7
HLA-DQB1-203ENST00000399082 TBX5Q99593 518 aa10.69□□□□□ -0.7
HLA-DQB1-203ENST00000399082 ZNF649Q9BS31 505 aa10.69□□□□□ -0.7
HLA-DQB1-203ENST00000399082 OR51B6Q9H340 312 aa10.69□□□□□ -0.7
HLA-DQB1-203ENST00000399082 CA10Q9NS85 328 aa10.69□□□□□ -0.7
HLA-DQB1-203ENST00000399082 CENPMQ9NSP4 180 aa10.69□□□□□ -0.7
HLA-DQB1-203ENST00000399082 SLCO1C1Q9NYB5 712 aa10.69□□□□□ -0.7
HLA-DQB1-203ENST00000399082 PDZD2O15018 2839 aa10.69□□□□□ -0.7
HLA-DQB1-203ENST00000399082 SETXQ7Z333 2677 aaKnown RBP10.69□□□□□ -0.7
HLA-DQB1-203ENST00000399082 A0A1W2PQL4 384 aaPredicted RBP10.68□□□□□ -0.7
HLA-DQB1-203ENST00000399082 PSMD9O00233 223 aa10.68□□□□□ -0.7
HLA-DQB1-203ENST00000399082 ABHD16AO95870 558 aa10.68□□□□□ -0.7
HLA-DQB1-203ENST00000399082 PCSK6P29122 969 aa10.68□□□□□ -0.7
HLA-DQB1-203ENST00000399082 UCP2P55851 309 aa10.68□□□□□ -0.7
HLA-DQB1-203ENST00000399082 CXCR4P61073 352 aa10.68□□□□□ -0.7
HLA-DQB1-203ENST00000399082 ROM1Q03395 351 aa10.68□□□□□ -0.7
HLA-DQB1-203ENST00000399082 POU4F2Q12837 409 aa10.68□□□□□ -0.7
HLA-DQB1-203ENST00000399082 ECH1Q13011 328 aa10.68□□□□□ -0.7
HLA-DQB1-203ENST00000399082 ADIPOQQ15848 244 aa10.68□□□□□ -0.7
HLA-DQB1-203ENST00000399082 PRSS45Q7RTY3 260 aa10.68□□□□□ -0.7
HLA-DQB1-203ENST00000399082 ZNF611Q8N823 705 aa10.68□□□□□ -0.7
HLA-DQB1-203ENST00000399082 C4orf45Q96LM5 186 aa10.68□□□□□ -0.7
HLA-DQB1-203ENST00000399082 Q96MT0 163 aa10.68□□□□□ -0.7
HLA-DQB1-203ENST00000399082 OR8B4Q96RC9 309 aa10.68□□□□□ -0.7
HLA-DQB1-203ENST00000399082 ZNF184Q99676 751 aaPredicted RBP10.68□□□□□ -0.7
HLA-DQB1-203ENST00000399082 KCNS3Q9BQ31 491 aa10.68□□□□□ -0.7
HLA-DQB1-203ENST00000399082 COPS4Q9BT78 406 aa10.68□□□□□ -0.7
HLA-DQB1-203ENST00000399082 C1QTNF5Q9BXJ0 243 aa10.68□□□□□ -0.7
HLA-DQB1-203ENST00000399082 ZNF442Q9H7R0 627 aa10.68□□□□□ -0.7
HLA-DQB1-203ENST00000399082 UBTD1Q9HAC8 227 aa10.68□□□□□ -0.7
HLA-DQB1-203ENST00000399082 CISD1Q9NZ45 108 aaKnown RBP10.68□□□□□ -0.7
HLA-DQB1-203ENST00000399082 MRM2Q9UI43 246 aaKnown RBP10.68□□□□□ -0.7
HLA-DQB1-203ENST00000399082 LAMP5Q9UJQ1 280 aa10.68□□□□□ -0.7
HLA-DQB1-203ENST00000399082 POU2F3Q9UKI9 436 aa10.68□□□□□ -0.7
HLA-DQB1-203ENST00000399082 MYRFQ9Y2G1 1151 aa10.68□□□□□ -0.7
HLA-DQB1-203ENST00000399082 STARD10Q9Y365 291 aa10.68□□□□□ -0.7
HLA-DQB1-203ENST00000399082 LRP12Q9Y561 859 aa10.68□□□□□ -0.7
HLA-DQB1-203ENST00000399082 SPG11Q96JI7 2443 aa10.68□□□□□ -0.7
HLA-DQB1-203ENST00000399082 F5H5K5 113 aa10.67□□□□□ -0.7
HLA-DQB1-203ENST00000399082 M0R135 149 aa10.67□□□□□ -0.7
HLA-DQB1-203ENST00000399082 XPNPEP2O43895 674 aa10.67□□□□□ -0.7
HLA-DQB1-203ENST00000399082 CD8AP01732 235 aa10.67□□□□□ -0.7
HLA-DQB1-203ENST00000399082 IGHA1P01876 353 aa10.67□□□□□ -0.7
HLA-DQB1-203ENST00000399082 SOD3P08294 240 aa10.67□□□□□ -0.7
HLA-DQB1-203ENST00000399082 OR2T7P0C7T2 308 aa10.67□□□□□ -0.7
HLA-DQB1-203ENST00000399082 GLRXP35754 106 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms