RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 ABCD3P28288 659 aa10.3□□□□□ -0.76
TTC28-201ENST00000397906 GABRG1Q8N1C3 465 aa10.3□□□□□ -0.76
TTC28-201ENST00000397906 OR10AD1Q8NGE0 317 aa10.3□□□□□ -0.76
TTC28-201ENST00000397906 OR1S2Q8NGQ3 325 aa10.3□□□□□ -0.76
TTC28-201ENST00000397906 C7orf72A4D263 438 aa10.3□□□□□ -0.76
TTC28-201ENST00000397906 RPS2P15880 293 aaKnown RBP10.3□□□□□ -0.76
TTC28-201ENST00000397906 ANKRD53Q8N9V6 530 aa10.3□□□□□ -0.76
TTC28-201ENST00000397906 ST8SIA1Q92185 356 aa10.3□□□□□ -0.76
TTC28-201ENST00000397906 ATF6BQ99941 703 aa10.3□□□□□ -0.76
TTC28-201ENST00000397906 UBTD1Q9HAC8 227 aa10.3□□□□□ -0.76
TTC28-201ENST00000397906 BCO1Q9HAY6 547 aa10.3□□□□□ -0.76
TTC28-201ENST00000397906 NUPL2O15504 423 aaKnown RBP10.3□□□□□ -0.76
TTC28-201ENST00000397906 SPRY1O43609 319 aaPredicted RBP10.3□□□□□ -0.76
TTC28-201ENST00000397906 LIPNQ5VXI9 398 aa10.3□□□□□ -0.76
TTC28-201ENST00000397906 ZNF573Q86YE8 665 aa10.3□□□□□ -0.76
TTC28-201ENST00000397906 OR51A4Q8NGJ6 313 aa10.3□□□□□ -0.76
TTC28-201ENST00000397906 C1QTNF3Q9BXJ4 246 aa10.3□□□□□ -0.76
TTC28-201ENST00000397906 NMES1Q9C002 83 aa10.3□□□□□ -0.76
TTC28-201ENST00000397906 CHST6Q9GZX3 395 aa10.3□□□□□ -0.76
TTC28-201ENST00000397906 PRRC2BQ5JSZ5 2229 aaKnown RBP10.3□□□□□ -0.76
TTC28-201ENST00000397906 THBS1P07996 1170 aa10.3□□□□□ -0.76
TTC28-201ENST00000397906 SRP9P49458 86 aaKnown RBP10.3□□□□□ -0.76
TTC28-201ENST00000397906 FAM53BQ14153 422 aa10.3□□□□□ -0.76
TTC28-201ENST00000397906 CLVS2Q5SYC1 327 aa10.3□□□□□ -0.76
TTC28-201ENST00000397906 KCNIP4Q6PIL6 250 aa10.3□□□□□ -0.76
TTC28-201ENST00000397906 THNSL2Q86YJ6 484 aa10.3□□□□□ -0.76
TTC28-201ENST00000397906 SPAARA0A1B0GVQ0 90 aa10.3□□□□□ -0.76
TTC28-201ENST00000397906 GPR37O15354 613 aa10.3□□□□□ -0.76
TTC28-201ENST00000397906 PRPH2P23942 346 aa10.3□□□□□ -0.76
TTC28-201ENST00000397906 SUB1P53999 127 aaKnown RBP eCLIP10.3□□□□□ -0.76
TTC28-201ENST00000397906 UBE2G2P60604 165 aa10.3□□□□□ -0.76
TTC28-201ENST00000397906 BPIFCQ8NFQ6 507 aa10.3□□□□□ -0.76
TTC28-201ENST00000397906 TAS2R5Q9NYW4 299 aa10.3□□□□□ -0.76
TTC28-201ENST00000397906 ZNF831Q5JPB2 1677 aa10.3□□□□□ -0.76
TTC28-201ENST00000397906 PRSS37A4D1T9 235 aa10.3□□□□□ -0.76
TTC28-201ENST00000397906 PAX6P26367 422 aa10.3□□□□□ -0.76
TTC28-201ENST00000397906 PRSS36Q5K4E3 855 aa10.3□□□□□ -0.76
TTC28-201ENST00000397906 SPNS1Q9H2V7 528 aa10.3□□□□□ -0.76
TTC28-201ENST00000397906 CHRNB1P11230 501 aa10.29□□□□□ -0.76
TTC28-201ENST00000397906 CYP4V2Q6ZWL3 525 aaPredicted RBP10.29□□□□□ -0.76
TTC28-201ENST00000397906 OR2A1Q8NGT9 310 aa10.29□□□□□ -0.76
TTC28-201ENST00000397906 VN1R1Q9GZP7 353 aa10.29□□□□□ -0.76
TTC28-201ENST00000397906 ZNF391Q9UJN7 358 aa10.29□□□□□ -0.76
TTC28-201ENST00000397906 TBPP20226 339 aa10.29□□□□□ -0.76
TTC28-201ENST00000397906 MTNR1BP49286 362 aa10.29□□□□□ -0.76
TTC28-201ENST00000397906 PNLIPRP2P54317 469 aa10.29□□□□□ -0.76
TTC28-201ENST00000397906 GSG1Q2KHT4 349 aa10.29□□□□□ -0.76
TTC28-201ENST00000397906 CEACAM16Q2WEN9 425 aa10.29□□□□□ -0.76
TTC28-201ENST00000397906 TMEM179BQ7Z7N9 219 aa10.29□□□□□ -0.76
TTC28-201ENST00000397906 CDC20BQ86Y33 519 aa10.29□□□□□ -0.76
TTC28-201ENST00000397906 OR2AK2Q8NG84 335 aa10.29□□□□□ -0.76
TTC28-201ENST00000397906 CCL17Q92583 94 aa10.29□□□□□ -0.76
TTC28-201ENST00000397906 DIMT1Q9UNQ2 313 aaKnown RBP10.29□□□□□ -0.76
TTC28-201ENST00000397906 LILRA5A6NI73 299 aa10.29□□□□□ -0.76
TTC28-201ENST00000397906 OPRM1P35372 400 aa10.29□□□□□ -0.76
TTC28-201ENST00000397906 CHST2Q9Y4C5 530 aa10.29□□□□□ -0.76
TTC28-201ENST00000397906 TRAV17A0A0B4J275 112 aa10.29□□□□□ -0.76
TTC28-201ENST00000397906 TRAF3IP2O43734 574 aaPredicted RBP10.29□□□□□ -0.76
TTC28-201ENST00000397906 TFAP2EQ6VUC0 442 aa10.29□□□□□ -0.76
TTC28-201ENST00000397906 MOB3BQ86TA1 216 aa10.29□□□□□ -0.76
TTC28-201ENST00000397906 ARIH2OSQ8N7S6 290 aa10.29□□□□□ -0.76
TTC28-201ENST00000397906 FN3KRPQ9HA64 309 aa10.29□□□□□ -0.76
TTC28-201ENST00000397906 CCSO14618 274 aa10.29□□□□□ -0.76
TTC28-201ENST00000397906 CLEC2LP0C7M8 214 aa10.29□□□□□ -0.76
TTC28-201ENST00000397906 PLXDC2Q6UX71 529 aa10.29□□□□□ -0.76
TTC28-201ENST00000397906 PELI3Q8N2H9 469 aa10.29□□□□□ -0.76
TTC28-201ENST00000397906 OR13C5Q8NGS8 318 aa10.29□□□□□ -0.76
TTC28-201ENST00000397906 NUDT9Q9BW91 350 aa10.29□□□□□ -0.76
TTC28-201ENST00000397906 TUBG2Q9NRH3 451 aa10.29□□□□□ -0.76
TTC28-201ENST00000397906 K7EQM0 130 aa10.29□□□□□ -0.76
TTC28-201ENST00000397906 OR1M1Q8NGA1 313 aa10.29□□□□□ -0.76
TTC28-201ENST00000397906 SMCO4Q9NRQ5 59 aa10.29□□□□□ -0.76
TTC28-201ENST00000397906 AKAP11Q9UKA4 1901 aa10.29□□□□□ -0.76
TTC28-201ENST00000397906 NDUFA6P56556 154 aa10.29□□□□□ -0.76
TTC28-201ENST00000397906 IAH1Q2TAA2 248 aaPredicted RBP10.29□□□□□ -0.76
TTC28-201ENST00000397906 PARP12Q9H0J9 701 aaKnown RBP10.29□□□□□ -0.76
TTC28-201ENST00000397906 ARV1Q9H2C2 271 aa10.29□□□□□ -0.76
TTC28-201ENST00000397906 CCL2P13500 99 aa10.29□□□□□ -0.76
TTC28-201ENST00000397906 ZNF121P58317 390 aaPredicted RBP10.29□□□□□ -0.76
TTC28-201ENST00000397906 FCRL6Q6DN72 434 aa10.29□□□□□ -0.76
TTC28-201ENST00000397906 C1orf196B1AJZ1 125 aa10.29□□□□□ -0.76
TTC28-201ENST00000397906 LYZL6O75951 148 aa10.29□□□□□ -0.76
TTC28-201ENST00000397906 ZFP82Q8N141 532 aa10.29□□□□□ -0.76
TTC28-201ENST00000397906 ESRP2Q9H6T0 727 aaKnown RBP10.29□□□□□ -0.76
TTC28-201ENST00000397906 BARX1Q9HBU1 254 aaPredicted RBP10.29□□□□□ -0.76
TTC28-201ENST00000397906 HIST2H3PS2Q5TEC6 136 aa10.28□□□□□ -0.76
TTC28-201ENST00000397906 HSD17B11Q8NBQ5 300 aa10.28□□□□□ -0.76
TTC28-201ENST00000397906 NME2P22392 152 aa10.28□□□□□ -0.76
TTC28-201ENST00000397906 SLC6A12P48065 614 aa10.28□□□□□ -0.76
TTC28-201ENST00000397906 PPP1CAP62136 330 aa10.28□□□□□ -0.76
TTC28-201ENST00000397906 AGERQ15109 404 aa10.28□□□□□ -0.76
TTC28-201ENST00000397906 PURGQ9UJV8 347 aaKnown RBP10.28□□□□□ -0.76
TTC28-201ENST00000397906 ETV7Q9Y603 341 aa10.28□□□□□ -0.76
TTC28-201ENST00000397906 GNG10P50151 68 aa10.28□□□□□ -0.76
TTC28-201ENST00000397906 PCBP4P57723 403 aaKnown RBP10.28□□□□□ -0.76
TTC28-201ENST00000397906 IL11RAQ14626 422 aa10.28□□□□□ -0.76
TTC28-201ENST00000397906 PEA15Q15121 130 aa10.28□□□□□ -0.76
TTC28-201ENST00000397906 ALKAL2Q6UX46 152 aa10.28□□□□□ -0.76
TTC28-201ENST00000397906 NOXA1Q86UR1 476 aa10.28□□□□□ -0.76
TTC28-201ENST00000397906 NAA40Q86UY6 237 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms