RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 EGFL6Q8IUX8 553 aa11.59□□□□□ -0.55
SEC13-209ENST00000397117 YIPF7Q8N8F6 280 aa11.59□□□□□ -0.55
SEC13-209ENST00000397117 OR52N5Q8NH56 324 aa11.59□□□□□ -0.55
SEC13-209ENST00000397117 ZFAND2BQ8WV99 257 aa11.59□□□□□ -0.55
SEC13-209ENST00000397117 RNASE6Q93091 150 aaKnown RBP11.59□□□□□ -0.55
SEC13-209ENST00000397117 NABP1Q96AH0 204 aa11.59□□□□□ -0.55
SEC13-209ENST00000397117 SMR3AQ99954 134 aa11.59□□□□□ -0.55
SEC13-209ENST00000397117 ABHD6Q9BV23 337 aa11.59□□□□□ -0.55
SEC13-209ENST00000397117 ZNF416Q9BWM5 594 aa11.59□□□□□ -0.55
SEC13-209ENST00000397117 MROQ9BYG7 248 aa11.59□□□□□ -0.55
SEC13-209ENST00000397117 KCNN2Q9H2S1 579 aa11.59□□□□□ -0.55
SEC13-209ENST00000397117 C1orf198Q9H425 327 aa11.59□□□□□ -0.55
SEC13-209ENST00000397117 ISYNA1Q9NPH2 558 aa11.59□□□□□ -0.55
SEC13-209ENST00000397117 MALT1Q9UDY8 824 aa11.59□□□□□ -0.55
SEC13-209ENST00000397117 MAGEB4O15481 346 aaPredicted RBP11.58□□□□□ -0.56
SEC13-209ENST00000397117 SULT1C4O75897 302 aa11.58□□□□□ -0.56
SEC13-209ENST00000397117 B4GALT1P15291 398 aa11.58□□□□□ -0.56
SEC13-209ENST00000397117 TAS2R43P59537 309 aa11.58□□□□□ -0.56
SEC13-209ENST00000397117 ARF1P84077 181 aaKnown RBP11.58□□□□□ -0.56
SEC13-209ENST00000397117 FOXF2Q12947 444 aa11.58□□□□□ -0.56
SEC13-209ENST00000397117 DEFB113Q30KQ7 82 aa11.58□□□□□ -0.56
SEC13-209ENST00000397117 NRN1LQ496H8 165 aa11.58□□□□□ -0.56
SEC13-209ENST00000397117 FAM27BQ5VT28 67 aa11.58□□□□□ -0.56
SEC13-209ENST00000397117 C9orf135Q5VTT2 229 aa11.58□□□□□ -0.56
SEC13-209ENST00000397117 GPR107Q5VW38 600 aa11.58□□□□□ -0.56
SEC13-209ENST00000397117 TFAP2EQ6VUC0 442 aa11.58□□□□□ -0.56
SEC13-209ENST00000397117 SPATC1Q76KD6 591 aa11.58□□□□□ -0.56
SEC13-209ENST00000397117 VASH1Q7L8A9 365 aaPredicted RBP11.58□□□□□ -0.56
SEC13-209ENST00000397117 KRT77Q7Z794 578 aa11.58□□□□□ -0.56
SEC13-209ENST00000397117 CLVS1Q8IUQ0 354 aaPredicted RBP11.58□□□□□ -0.56
SEC13-209ENST00000397117 SLC22A24Q8N4F4 322 aa11.58□□□□□ -0.56
SEC13-209ENST00000397117 ZNF485Q8NCK3 441 aa11.58□□□□□ -0.56
SEC13-209ENST00000397117 WFDC11Q8NEX6 87 aa11.58□□□□□ -0.56
SEC13-209ENST00000397117 UFD1Q92890 307 aa11.58□□□□□ -0.56
SEC13-209ENST00000397117 OPALINQ96PE5 141 aa11.58□□□□□ -0.56
SEC13-209ENST00000397117 GDF2Q9UK05 429 aaPredicted RBP11.58□□□□□ -0.56
SEC13-209ENST00000397117 PROCRQ9UNN8 238 aa11.58□□□□□ -0.56
SEC13-209ENST00000397117 LHFPL6Q9Y693 200 aa11.58□□□□□ -0.56
SEC13-209ENST00000397117 ZNF701M0R085 212 aaPredicted RBP11.57□□□□□ -0.56
SEC13-209ENST00000397117 CCRL2O00421 344 aa11.57□□□□□ -0.56
SEC13-209ENST00000397117 NOL3O60936 208 aaKnown RBP11.57□□□□□ -0.56
SEC13-209ENST00000397117 CNOT4O95628 575 aaKnown RBP11.57□□□□□ -0.56
SEC13-209ENST00000397117 RAF1P04049 648 aa11.57□□□□□ -0.56
SEC13-209ENST00000397117 CST2P09228 141 aa11.57□□□□□ -0.56
SEC13-209ENST00000397117 OR8G3PP0DMU2 310 aa11.57□□□□□ -0.56
SEC13-209ENST00000397117 CD36P16671 472 aa11.57□□□□□ -0.56
SEC13-209ENST00000397117 MPGP29372 298 aa11.57□□□□□ -0.56
SEC13-209ENST00000397117 HOXC12P31275 282 aa11.57□□□□□ -0.56
SEC13-209ENST00000397117 CEACAM8P31997 349 aaPredicted RBP11.57□□□□□ -0.56
SEC13-209ENST00000397117 LIPAP38571 399 aa11.57□□□□□ -0.56
SEC13-209ENST00000397117 RGS6P49758 472 aa11.57□□□□□ -0.56
SEC13-209ENST00000397117 ASCL1P50553 236 aa11.57□□□□□ -0.56
SEC13-209ENST00000397117 BDH1Q02338 343 aa11.57□□□□□ -0.56
SEC13-209ENST00000397117 ACSM1Q08AH1 577 aa11.57□□□□□ -0.56
SEC13-209ENST00000397117 MRPL28Q13084 256 aaKnown RBP11.57□□□□□ -0.56
SEC13-209ENST00000397117 AQP6Q13520 282 aa11.57□□□□□ -0.56
SEC13-209ENST00000397117 CNPY1Q3B7I2 92 aa11.57□□□□□ -0.56
SEC13-209ENST00000397117 ZNF684Q5T5D7 378 aa11.57□□□□□ -0.56
SEC13-209ENST00000397117 LIPKQ5VXJ0 399 aa11.57□□□□□ -0.56
SEC13-209ENST00000397117 VWA1Q6PCB0 445 aa11.57□□□□□ -0.56
SEC13-209ENST00000397117 LRRN1Q6UXK5 716 aa11.57□□□□□ -0.56
SEC13-209ENST00000397117 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.57□□□□□ -0.56
SEC13-209ENST00000397117 ZNF679Q8IYX0 411 aa11.57□□□□□ -0.56
SEC13-209ENST00000397117 NAXEQ8NCW5 288 aa11.57□□□□□ -0.56
SEC13-209ENST00000397117 GJC3Q8NFK1 279 aa11.57□□□□□ -0.56
SEC13-209ENST00000397117 ZNF420Q8TAQ5 688 aaPredicted RBP11.57□□□□□ -0.56
SEC13-209ENST00000397117 HAVCR2Q8TDQ0 301 aa11.57□□□□□ -0.56
SEC13-209ENST00000397117 ST7LQ8TDW4 575 aa11.57□□□□□ -0.56
SEC13-209ENST00000397117 OR8B4Q96RC9 309 aa11.57□□□□□ -0.56
SEC13-209ENST00000397117 AMELYQ99218 206 aa11.57□□□□□ -0.56
SEC13-209ENST00000397117 SH3GL3Q99963 347 aa11.57□□□□□ -0.56
SEC13-209ENST00000397117 SFXN3Q9BWM7 321 aa11.57□□□□□ -0.56
SEC13-209ENST00000397117 ELOVL3Q9HB03 270 aa11.57□□□□□ -0.56
SEC13-209ENST00000397117 CENPMQ9NSP4 180 aa11.57□□□□□ -0.56
SEC13-209ENST00000397117 ACOXLQ9NUZ1 547 aa11.57□□□□□ -0.56
SEC13-209ENST00000397117 SLCO1C1Q9NYB5 712 aa11.57□□□□□ -0.56
SEC13-209ENST00000397117 MRM2Q9UI43 246 aaKnown RBP11.57□□□□□ -0.56
SEC13-209ENST00000397117 MED12LQ86YW9 2145 aa11.57□□□□□ -0.56
SEC13-209ENST00000397117 DOCK7Q96N67 2140 aa11.57□□□□□ -0.56
SEC13-209ENST00000397117 PNMA8CA0A1B0GUJ8 204 aa11.57□□□□□ -0.56
SEC13-209ENST00000397117 PRR32B1ATL7 298 aa11.57□□□□□ -0.56
SEC13-209ENST00000397117 TNFSF13O75888 250 aa11.57□□□□□ -0.56
SEC13-209ENST00000397117 RPP14O95059 124 aaKnown RBP11.57□□□□□ -0.56
SEC13-209ENST00000397117 H2BFMP0C1H6 154 aa11.57□□□□□ -0.56
SEC13-209ENST00000397117 CPEP16870 476 aa11.57□□□□□ -0.56
SEC13-209ENST00000397117 CTSSP25774 331 aa11.57□□□□□ -0.56
SEC13-209ENST00000397117 RIDAP52758 137 aaKnown RBP11.57□□□□□ -0.56
SEC13-209ENST00000397117 PCBD1P61457 104 aa11.57□□□□□ -0.56
SEC13-209ENST00000397117 TGFBR3Q03167 851 aa11.57□□□□□ -0.56
SEC13-209ENST00000397117 ROM1Q03395 351 aa11.57□□□□□ -0.56
SEC13-209ENST00000397117 ENDOGQ14249 297 aaKnown RBP11.57□□□□□ -0.56
SEC13-209ENST00000397117 TAF13Q15543 124 aa11.57□□□□□ -0.56
SEC13-209ENST00000397117 KLHL24Q6TFL4 600 aa11.57□□□□□ -0.56
SEC13-209ENST00000397117 Q71RC1 249 aaPredicted RBP11.57□□□□□ -0.56
SEC13-209ENST00000397117 SLC16A14Q7RTX9 510 aa11.57□□□□□ -0.56
SEC13-209ENST00000397117 BTLAQ7Z6A9 289 aa11.57□□□□□ -0.56
SEC13-209ENST00000397117 ZFP41Q8N8Y5 198 aa11.57□□□□□ -0.56
SEC13-209ENST00000397117 RNF133Q8WVZ7 376 aa11.57□□□□□ -0.56
SEC13-209ENST00000397117 STARD4Q96DR4 205 aa11.57□□□□□ -0.56
SEC13-209ENST00000397117 SLAMF6Q96DU3 332 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms