RNA–Protein interactions for RNA: ENST00000396914.3

CHCHD4-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD4, Length 1,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-202ENST00000396914 ZNF555Q8NEP9 628 aa25.29■■□□□ 1.64
CHCHD4-202ENST00000396914 THEM6Q8WUY1 208 aa25.29■■□□□ 1.64
CHCHD4-202ENST00000396914 FOXC2Q99958 501 aa25.29■■□□□ 1.64
CHCHD4-202ENST00000396914 COPS4Q9BT78 406 aa25.29■■□□□ 1.64
CHCHD4-202ENST00000396914 MRPL37Q9BZE1 423 aaKnown RBP25.29■■□□□ 1.64
CHCHD4-202ENST00000396914 A0A1W2PPW3 197 aa25.28■■□□□ 1.64
CHCHD4-202ENST00000396914 CCDC182A6NF36 153 aa25.28■■□□□ 1.64
CHCHD4-202ENST00000396914 SLC22A31A6NKX4 558 aa25.28■■□□□ 1.64
CHCHD4-202ENST00000396914 PTH2RP49190 550 aa25.28■■□□□ 1.64
CHCHD4-202ENST00000396914 ATP5J2P56134 94 aa25.28■■□□□ 1.64
CHCHD4-202ENST00000396914 EFNB3Q15768 340 aa25.28■■□□□ 1.64
CHCHD4-202ENST00000396914 MSMPQ1L6U9 139 aa25.28■■□□□ 1.64
CHCHD4-202ENST00000396914 MST1LQ2TV78 715 aa25.28■■□□□ 1.64
CHCHD4-202ENST00000396914 AADACL4Q5VUY2 407 aa25.28■■□□□ 1.64
CHCHD4-202ENST00000396914 SYNPRQ8TBG9 265 aa25.28■■□□□ 1.64
CHCHD4-202ENST00000396914 SPTSSAQ969W0 71 aa25.28■■□□□ 1.64
CHCHD4-202ENST00000396914 DCLRE1CQ96SD1 692 aaKnown RBP25.28■■□□□ 1.64
CHCHD4-202ENST00000396914 DYNLRB1Q9NP97 96 aa25.28■■□□□ 1.64
CHCHD4-202ENST00000396914 PNRC2Q9NPJ4 139 aaKnown RBP25.28■■□□□ 1.64
CHCHD4-202ENST00000396914 C8orf4Q9NR00 106 aa25.28■■□□□ 1.64
CHCHD4-202ENST00000396914 DNAJC27Q9NZQ0 273 aa25.28■■□□□ 1.64
CHCHD4-202ENST00000396914 CSMD1Q96PZ7 3565 aa25.28■■□□□ 1.64
CHCHD4-202ENST00000396914 OVOL3O00110 214 aa25.27■■□□□ 1.64
CHCHD4-202ENST00000396914 GCH1P30793 250 aa25.27■■□□□ 1.64
CHCHD4-202ENST00000396914 SWI5Q1ZZU3 235 aa25.27■■□□□ 1.64
CHCHD4-202ENST00000396914 LRP11Q86VZ4 500 aa25.27■■□□□ 1.64
CHCHD4-202ENST00000396914 OR10S1Q8NGN2 331 aa25.27■■□□□ 1.64
CHCHD4-202ENST00000396914 SLC25A40Q8TBP6 338 aa25.27■■□□□ 1.64
CHCHD4-202ENST00000396914 UBE2FQ969M7 185 aa25.27■■□□□ 1.64
CHCHD4-202ENST00000396914 VRK1Q99986 396 aaPredicted RBP25.27■■□□□ 1.64
CHCHD4-202ENST00000396914 FAM118AQ9NWS6 357 aa25.27■■□□□ 1.64
CHCHD4-202ENST00000396914 NKX1-2Q9UD57 310 aaPredicted RBP25.27■■□□□ 1.64
CHCHD4-202ENST00000396914 LOC100130705A0A1B0GUX0 176 aa25.26■■□□□ 1.63
CHCHD4-202ENST00000396914 ZNF878C9JN71 531 aa25.26■■□□□ 1.63
CHCHD4-202ENST00000396914 SLC6A9P48067 706 aa25.26■■□□□ 1.63
CHCHD4-202ENST00000396914 TPTEP56180 551 aa25.26■■□□□ 1.63
CHCHD4-202ENST00000396914 KLF3P57682 345 aaPredicted RBP25.26■■□□□ 1.63
CHCHD4-202ENST00000396914 SLC34A1Q06495 639 aa25.26■■□□□ 1.63
CHCHD4-202ENST00000396914 ZNF718Q3SXZ3 478 aa25.26■■□□□ 1.63
CHCHD4-202ENST00000396914 SLC16A9Q7RTY1 509 aa25.26■■□□□ 1.63
CHCHD4-202ENST00000396914 C1orf174Q8IYL3 243 aa25.26■■□□□ 1.63
CHCHD4-202ENST00000396914 PACRGLQ8N7B6 248 aa25.26■■□□□ 1.63
CHCHD4-202ENST00000396914 ST7LQ8TDW4 575 aa25.26■■□□□ 1.63
CHCHD4-202ENST00000396914 TRUB1Q8WWH5 349 aaKnown RBP25.26■■□□□ 1.63
CHCHD4-202ENST00000396914 RDH12Q96NR8 316 aa25.26■■□□□ 1.63
CHCHD4-202ENST00000396914 CNN2Q99439 309 aaKnown RBP25.26■■□□□ 1.63
CHCHD4-202ENST00000396914 ABHD6Q9BV23 337 aa25.26■■□□□ 1.63
CHCHD4-202ENST00000396914 OR2J1Q9GZK6 312 aa25.26■■□□□ 1.63
CHCHD4-202ENST00000396914 ZNF454Q8N9F8 522 aa25.25■■□□□ 1.63
CHCHD4-202ENST00000396914 OTOSQ8NHW6 89 aa25.25■■□□□ 1.63
CHCHD4-202ENST00000396914 GSX2Q9BZM3 304 aa25.25■■□□□ 1.63
CHCHD4-202ENST00000396914 VCXQ9H320 206 aa25.25■■□□□ 1.63
CHCHD4-202ENST00000396914 ZNF701Q9NV72 531 aaPredicted RBP25.25■■□□□ 1.63
CHCHD4-202ENST00000396914 TBCCD1Q9NVR7 557 aa25.25■■□□□ 1.63
CHCHD4-202ENST00000396914 LAMP5Q9UJQ1 280 aa25.25■■□□□ 1.63
CHCHD4-202ENST00000396914 TMEM129A0AVI4 362 aa25.24■■□□□ 1.63
CHCHD4-202ENST00000396914 CLPTM1O96005 669 aa25.24■■□□□ 1.63
CHCHD4-202ENST00000396914 LYNP07948 512 aa25.24■■□□□ 1.63
CHCHD4-202ENST00000396914 HSD11B1P28845 292 aa25.24■■□□□ 1.63
CHCHD4-202ENST00000396914 SLC15A1P46059 708 aa25.24■■□□□ 1.63
CHCHD4-202ENST00000396914 RGS6P49758 472 aa25.24■■□□□ 1.63
CHCHD4-202ENST00000396914 HCCSP53701 268 aa25.24■■□□□ 1.63
CHCHD4-202ENST00000396914 ALKBH6Q3KRA9 238 aa25.24■■□□□ 1.63
CHCHD4-202ENST00000396914 OGFRL1Q5TC84 451 aaPredicted RBP25.24■■□□□ 1.63
CHCHD4-202ENST00000396914 LRRC75A-AS1Q8N1F1 130 aa25.24■■□□□ 1.63
CHCHD4-202ENST00000396914 CYGBQ8WWM9 190 aa25.24■■□□□ 1.63
CHCHD4-202ENST00000396914 RFKQ969G6 155 aa25.24■■□□□ 1.63
CHCHD4-202ENST00000396914 ZNF582Q96NG8 517 aaPredicted RBP25.24■■□□□ 1.63
CHCHD4-202ENST00000396914 DDX28Q9NUL7 540 aaKnown RBP25.24■■□□□ 1.63
CHCHD4-202ENST00000396914 STARD10Q9Y365 291 aa25.24■■□□□ 1.63
CHCHD4-202ENST00000396914 RTTNQ86VV8 2226 aa25.24■■□□□ 1.63
CHCHD4-202ENST00000396914 M0R135 149 aa25.23■■□□□ 1.63
CHCHD4-202ENST00000396914 CASQ2O14958 399 aaPredicted RBP25.23■■□□□ 1.63
CHCHD4-202ENST00000396914 ACSM4P0C7M7 580 aa25.23■■□□□ 1.63
CHCHD4-202ENST00000396914 NUDT6P53370 316 aa25.23■■□□□ 1.63
CHCHD4-202ENST00000396914 NKPD1Q17RQ9 610 aa25.23■■□□□ 1.63
CHCHD4-202ENST00000396914 RSPO1Q2MKA7 263 aaPredicted RBP25.23■■□□□ 1.63
CHCHD4-202ENST00000396914 OR5L1Q8NGL2 311 aa25.23■■□□□ 1.63
CHCHD4-202ENST00000396914 IPCEF1Q8WWN9 437 aaPredicted RBP25.23■■□□□ 1.63
CHCHD4-202ENST00000396914 ZNF799Q96GE5 643 aa25.23■■□□□ 1.63
CHCHD4-202ENST00000396914 COG8Q96MW5 612 aa25.23■■□□□ 1.63
CHCHD4-202ENST00000396914 DOK1Q99704 481 aa25.23■■□□□ 1.63
CHCHD4-202ENST00000396914 YIPF3Q9GZM5 350 aa25.23■■□□□ 1.63
CHCHD4-202ENST00000396914 RNPEPL1Q9HAU8 725 aa25.23■■□□□ 1.63
CHCHD4-202ENST00000396914 MYEF2Q9P2K5 600 aaKnown RBP25.23■■□□□ 1.63
CHCHD4-202ENST00000396914 WARS2Q9UGM6 360 aaKnown RBP25.23■■□□□ 1.63
CHCHD4-202ENST00000396914 FBXO9Q9UK97 447 aaPredicted RBP25.23■■□□□ 1.63
CHCHD4-202ENST00000396914 N6AMT1Q9Y5N5 214 aa25.23■■□□□ 1.63
CHCHD4-202ENST00000396914 MAST4O15021 2626 aa25.23■■□□□ 1.63
CHCHD4-202ENST00000396914 ICMTO60725 284 aa25.22■■□□□ 1.63
CHCHD4-202ENST00000396914 LCATP04180 440 aa25.22■■□□□ 1.63
CHCHD4-202ENST00000396914 H2BFMP0C1H6 154 aa25.22■■□□□ 1.63
CHCHD4-202ENST00000396914 ZNF250P15622 560 aa25.22■■□□□ 1.63
CHCHD4-202ENST00000396914 ATP6V1E1P36543 226 aa25.22■■□□□ 1.63
CHCHD4-202ENST00000396914 EVX1P49640 407 aa25.22■■□□□ 1.63
CHCHD4-202ENST00000396914 PRKXP51817 358 aa25.22■■□□□ 1.63
CHCHD4-202ENST00000396914 MAD2L1BPQ15013 274 aaPredicted RBP25.22■■□□□ 1.63
CHCHD4-202ENST00000396914 NAA40Q86UY6 237 aa25.22■■□□□ 1.63
CHCHD4-202ENST00000396914 HIST2H2ABQ8IUE6 130 aaPredicted RBP25.22■■□□□ 1.63
CHCHD4-202ENST00000396914 KLF14Q8TD94 323 aaPredicted RBP25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms