RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 EDDM3AQ14507 147 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 TESK1Q15569 626 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 BATFQ16520 125 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 USP51Q70EK9 711 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 SYS1Q8N2H4 156 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 ZNF439Q8NDP4 499 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 BHLHE23Q8NDY6 225 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 HPSE2Q8WWQ2 592 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 C11orf54Q9H0W9 315 aaPredicted RBP4.97□□□□□ -1.61
VPS13C-204ENST00000395898 TXNIPQ9H3M7 391 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.97□□□□□ -1.61
VPS13C-204ENST00000395898 A0A1W2PPC4 97 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 OR5H14A6NHG9 310 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 FOSL1P15407 271 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 RPS19P39019 145 aaKnown RBP4.97□□□□□ -1.61
VPS13C-204ENST00000395898 CLINT1Q14677 625 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 CDONQ4KMG0 1287 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 THNSL2Q86YJ6 484 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 KCNRGQ8N5I3 272 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 DUS3LQ96G46 650 aaKnown RBP4.97□□□□□ -1.61
VPS13C-204ENST00000395898 OPALINQ96PE5 141 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 CHRDL1Q9BU40 450 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 PCED1AQ9H1Q7 454 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 SCN4AP35499 1836 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 TP53BP1Q12888 1972 aaPredicted RBP4.97□□□□□ -1.61
VPS13C-204ENST00000395898 TRAF3IP2O43734 574 aaPredicted RBP4.97□□□□□ -1.61
VPS13C-204ENST00000395898 TMEM81Q6P7N7 255 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 ACOT7LQ6ZUV0 252 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 SIRT6Q8N6T7 355 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 OR51S1Q8NGJ8 323 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 SFT2D1Q8WV19 159 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 MENTQ9BUN1 341 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 TMEM9BQ9NQ34 198 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 PPT2Q9UMR5 302 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 NDUFB7P17568 137 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 SPI1P17947 270 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 APEX1P27695 318 aaKnown RBP4.97□□□□□ -1.61
VPS13C-204ENST00000395898 DSCR4P56555 118 aaPredicted RBP4.97□□□□□ -1.61
VPS13C-204ENST00000395898 ZNF468Q5VIY5 522 aaPredicted RBP4.97□□□□□ -1.61
VPS13C-204ENST00000395898 SLC35E1Q96K37 410 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 CIB3Q96Q77 187 aaPredicted RBP4.97□□□□□ -1.61
VPS13C-204ENST00000395898 ACOXLQ9NUZ1 547 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 PURGQ9UJV8 347 aaKnown RBP4.97□□□□□ -1.61
VPS13C-204ENST00000395898 R4GMQ9 66 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 ARHGEF17Q96PE2 2063 aaPredicted RBP4.97□□□□□ -1.61
VPS13C-204ENST00000395898 CABIN1Q9Y6J0 2220 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 LMO7DNF2Z398 122 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 EFSO43281 561 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 SLC19A1P41440 591 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 CAPZBP47756 277 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 NPY4RP50391 375 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 TLE1Q04724 770 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 LAIR1Q6GTX8 287 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 BTNL8Q6UX41 500 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 SLC38A9Q8NBW4 561 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 OR13C8Q8NGS7 320 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 M1APQ8TC57 530 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 ST7LQ8TDW4 575 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 SCARB1Q8WTV0 552 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 TTC9Q92623 222 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 MBOAT4Q96T53 435 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 S1PR3Q99500 378 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 PCYT1BQ9Y5K3 369 aaPredicted RBP4.97□□□□□ -1.61
VPS13C-204ENST00000395898 LRP5O75197 1615 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 PPP5D1E7EU14 171 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 MGST1P10620 155 aaKnown RBP4.97□□□□□ -1.61
VPS13C-204ENST00000395898 GLRA1P23415 457 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 CCR6P51684 374 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 YRDCQ86U90 279 aaKnown RBP4.97□□□□□ -1.61
VPS13C-204ENST00000395898 BAGE3Q86Y29 109 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 BAGE2Q86Y30 109 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 ARHGEF39Q8N4T4 335 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 GALMQ96C23 342 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 NDFIP1Q9BT67 221 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 RNF32Q9H0A6 362 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 ERVMER34-1Q9H9K5 563 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 GNB4Q9HAV0 340 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 ZFP92A6NM28 416 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 E5RGE8 158 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 TGM1P22735 817 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 BSGP35613 385 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 DIO1P49895 249 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 NOVA1P51513 510 aaKnown RBP4.97□□□□□ -1.61
VPS13C-204ENST00000395898 ADGRF3Q8IZF5 1079 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 PIGTQ969N2 578 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 ZIC5Q96T25 663 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 SLC25A19Q9HC21 320 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 FBXO8Q9NRD0 319 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 ZNF391Q9UJN7 358 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 NSG2Q9Y328 171 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 QSER1Q2KHR3 1735 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 G3V3Y1 287 aa4.96□□□□□ -1.61
VPS13C-204ENST00000395898 TNFSF11O14788 317 aa4.96□□□□□ -1.61
VPS13C-204ENST00000395898 MYOGP15173 224 aa4.96□□□□□ -1.61
VPS13C-204ENST00000395898 SDHBP21912 280 aa4.96□□□□□ -1.61
VPS13C-204ENST00000395898 HOXD11P31277 338 aaPredicted RBP4.96□□□□□ -1.61
VPS13C-204ENST00000395898 LIPAP38571 399 aa4.96□□□□□ -1.61
VPS13C-204ENST00000395898 IL11RAQ14626 422 aa4.96□□□□□ -1.61
VPS13C-204ENST00000395898 TCTN3Q6NUS6 607 aa4.96□□□□□ -1.61
VPS13C-204ENST00000395898 PP6455Q8WZ26 134 aa4.96□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms