RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 CST11Q9H112 138 aa16.97■□□□□ 0.31
HOXC6-202ENST00000394331 C19orf53Q9UNZ5 99 aaPredicted RBP16.97■□□□□ 0.31
HOXC6-202ENST00000394331 M0QYG6 137 aa16.97■□□□□ 0.31
HOXC6-202ENST00000394331 TNFSF14O43557 240 aa16.97■□□□□ 0.31
HOXC6-202ENST00000394331 DBIP07108 87 aaKnown RBP16.97■□□□□ 0.31
HOXC6-202ENST00000394331 ADH6P28332 368 aa16.97■□□□□ 0.31
HOXC6-202ENST00000394331 LSM6P62312 80 aaKnown RBP16.97■□□□□ 0.31
HOXC6-202ENST00000394331 TMEM196Q5HYL7 178 aa16.97■□□□□ 0.31
HOXC6-202ENST00000394331 PRSS54Q6PEW0 395 aa16.97■□□□□ 0.31
HOXC6-202ENST00000394331 OR4N5Q8IXE1 308 aa16.97■□□□□ 0.31
HOXC6-202ENST00000394331 ZNF619Q8N2I2 560 aa16.97■□□□□ 0.31
HOXC6-202ENST00000394331 OR51D1Q8NGF3 324 aa16.97■□□□□ 0.31
HOXC6-202ENST00000394331 GABRG3Q99928 467 aa16.97■□□□□ 0.31
HOXC6-202ENST00000394331 ZNF350Q9GZX5 532 aa16.97■□□□□ 0.31
HOXC6-202ENST00000394331 CERS4Q9HA82 394 aa16.97■□□□□ 0.31
HOXC6-202ENST00000394331 A0A0A6YYH2 397 aa16.96■□□□□ 0.31
HOXC6-202ENST00000394331 A6NJ64 397 aa16.96■□□□□ 0.31
HOXC6-202ENST00000394331 ARRB1P49407 418 aaPredicted RBP16.96■□□□□ 0.31
HOXC6-202ENST00000394331 NFATC4Q14934 902 aa16.96■□□□□ 0.31
HOXC6-202ENST00000394331 RSU1Q15404 277 aa16.96■□□□□ 0.31
HOXC6-202ENST00000394331 GALNT14Q96FL9 552 aa16.96■□□□□ 0.31
HOXC6-202ENST00000394331 SLC5A7Q9GZV3 580 aa16.96■□□□□ 0.31
HOXC6-202ENST00000394331 TRAV8-7A0A075B6U6 113 aa16.96■□□□□ 0.3
HOXC6-202ENST00000394331 FHL1Q13642 323 aa16.96■□□□□ 0.3
HOXC6-202ENST00000394331 GAMTQ14353 236 aa16.96■□□□□ 0.3
HOXC6-202ENST00000394331 RD3Q7Z3Z2 195 aa16.96■□□□□ 0.3
HOXC6-202ENST00000394331 TGIF2LXQ8IUE1 241 aa16.96■□□□□ 0.3
HOXC6-202ENST00000394331 FLVCR1-AS1Q8TAF5 88 aa16.96■□□□□ 0.3
HOXC6-202ENST00000394331 WDR92Q96MX6 357 aa16.96■□□□□ 0.3
HOXC6-202ENST00000394331 METTL9Q9H1A3 318 aa16.96■□□□□ 0.3
HOXC6-202ENST00000394331 IGFLR1Q9H665 355 aa16.96■□□□□ 0.3
HOXC6-202ENST00000394331 UBQLN4Q9NRR5 601 aa16.96■□□□□ 0.3
HOXC6-202ENST00000394331 DOK5Q9P104 306 aa16.96■□□□□ 0.3
HOXC6-202ENST00000394331 HDGFL3Q9Y3E1 203 aa16.96■□□□□ 0.3
HOXC6-202ENST00000394331 EEF1E1-BLOC1S5C9J1V9 151 aa16.95■□□□□ 0.3
HOXC6-202ENST00000394331 LRP3O75074 770 aa16.95■□□□□ 0.3
HOXC6-202ENST00000394331 ALOX12BO75342 701 aa16.95■□□□□ 0.3
HOXC6-202ENST00000394331 CLDN2P57739 230 aa16.95■□□□□ 0.3
HOXC6-202ENST00000394331 SNRPNP63162 240 aaKnown RBP16.95■□□□□ 0.3
HOXC6-202ENST00000394331 PARM1Q6UWI2 310 aa16.95■□□□□ 0.3
HOXC6-202ENST00000394331 BEND2Q8NDZ0 799 aa16.95■□□□□ 0.3
HOXC6-202ENST00000394331 OR51A7Q8NH64 312 aa16.95■□□□□ 0.3
HOXC6-202ENST00000394331 CDCA3Q99618 268 aaPredicted RBP16.95■□□□□ 0.3
HOXC6-202ENST00000394331 SLC6A7Q99884 636 aa16.95■□□□□ 0.3
HOXC6-202ENST00000394331 M0R036 132 aa16.95■□□□□ 0.3
HOXC6-202ENST00000394331 SLC17A2O00624 439 aa16.95■□□□□ 0.3
HOXC6-202ENST00000394331 SMAD9O15198 467 aaKnown RBP16.95■□□□□ 0.3
HOXC6-202ENST00000394331 RPS4Y1P22090 263 aaKnown RBP16.95■□□□□ 0.3
HOXC6-202ENST00000394331 SURF2Q15527 256 aaPredicted RBP16.95■□□□□ 0.3
HOXC6-202ENST00000394331 OR10D4PQ8NGN7 298 aa16.95■□□□□ 0.3
HOXC6-202ENST00000394331 GPR148Q8TDV2 347 aa16.95■□□□□ 0.3
HOXC6-202ENST00000394331 PMM1Q92871 262 aa16.95■□□□□ 0.3
HOXC6-202ENST00000394331 LYRM4Q9HD34 91 aa16.95■□□□□ 0.3
HOXC6-202ENST00000394331 MSRAQ9UJ68 235 aa16.95■□□□□ 0.3
HOXC6-202ENST00000394331 KCNIP3Q9Y2W7 256 aa16.95■□□□□ 0.3
HOXC6-202ENST00000394331 SPACA6W5XKT8 324 aa16.95■□□□□ 0.3
HOXC6-202ENST00000394331 A0A087WV62 115 aa16.94■□□□□ 0.3
HOXC6-202ENST00000394331 KCNAB3O43448 404 aa16.94■□□□□ 0.3
HOXC6-202ENST00000394331 CTSVO60911 334 aa16.94■□□□□ 0.3
HOXC6-202ENST00000394331 UPK3AO75631 287 aa16.94■□□□□ 0.3
HOXC6-202ENST00000394331 HIST1H1CP16403 213 aaKnown RBP16.94■□□□□ 0.3
HOXC6-202ENST00000394331 CASP6P55212 293 aa16.94■□□□□ 0.3
HOXC6-202ENST00000394331 TCEA2Q15560 299 aa16.94■□□□□ 0.3
HOXC6-202ENST00000394331 RAB11BQ15907 218 aa16.94■□□□□ 0.3
HOXC6-202ENST00000394331 TRMT12Q53H54 448 aaKnown RBP16.94■□□□□ 0.3
HOXC6-202ENST00000394331 PHF19Q5T6S3 580 aa16.94■□□□□ 0.3
HOXC6-202ENST00000394331 HIST2H3PS2Q5TEC6 136 aa16.94■□□□□ 0.3
HOXC6-202ENST00000394331 ARHGAP40Q5TG30 622 aa16.94■□□□□ 0.3
HOXC6-202ENST00000394331 FAM166AQ6J272 317 aa16.94■□□□□ 0.3
HOXC6-202ENST00000394331 FIGLAQ6QHK4 219 aa16.94■□□□□ 0.3
HOXC6-202ENST00000394331 FAM220AQ7Z4H9 259 aa16.94■□□□□ 0.3
HOXC6-202ENST00000394331 CD163Q86VB7 1156 aa16.94■□□□□ 0.3
HOXC6-202ENST00000394331 FRMD1Q8N878 549 aa16.94■□□□□ 0.3
HOXC6-202ENST00000394331 CDRT4Q8N9R6 151 aa16.94■□□□□ 0.3
HOXC6-202ENST00000394331 MCHR2Q969V1 340 aa16.94■□□□□ 0.3
HOXC6-202ENST00000394331 FAM3DQ96BQ1 224 aa16.94■□□□□ 0.3
HOXC6-202ENST00000394331 ADAP2Q9NPF8 381 aa16.94■□□□□ 0.3
HOXC6-202ENST00000394331 TRBV23OR9-2A0A075B6M9 112 aa16.94■□□□□ 0.3
HOXC6-202ENST00000394331 H0YIZ8 118 aa16.94■□□□□ 0.3
HOXC6-202ENST00000394331 MAS1P04201 325 aa16.94■□□□□ 0.3
HOXC6-202ENST00000394331 LAMP2P13473 410 aa16.94■□□□□ 0.3
HOXC6-202ENST00000394331 NID1P14543 1247 aa16.94■□□□□ 0.3
HOXC6-202ENST00000394331 NHLH2Q02577 135 aa16.94■□□□□ 0.3
HOXC6-202ENST00000394331 C2orf76Q3KRA6 126 aa16.94■□□□□ 0.3
HOXC6-202ENST00000394331 DCST2Q5T1A1 773 aa16.94■□□□□ 0.3
HOXC6-202ENST00000394331 FHL5Q5TD97 284 aa16.94■□□□□ 0.3
HOXC6-202ENST00000394331 FGF14Q92915 247 aa16.94■□□□□ 0.3
HOXC6-202ENST00000394331 NMNAT2Q9BZQ4 307 aa16.94■□□□□ 0.3
HOXC6-202ENST00000394331 MRPS33Q9Y291 106 aaKnown RBP16.94■□□□□ 0.3
HOXC6-202ENST00000394331 SNRNP200O75643 2136 aaKnown RBP16.94■□□□□ 0.3
HOXC6-202ENST00000394331 CHD7Q9P2D1 2997 aa16.94■□□□□ 0.3
HOXC6-202ENST00000394331 C5orf51A6NDU8 294 aa16.93■□□□□ 0.3
HOXC6-202ENST00000394331 APBB3O95704 486 aa16.93■□□□□ 0.3
HOXC6-202ENST00000394331 DPPA2Q7Z7J5 298 aa16.93■□□□□ 0.3
HOXC6-202ENST00000394331 CCDC54Q8NEL0 328 aa16.93■□□□□ 0.3
HOXC6-202ENST00000394331 OR5T3Q8NGG3 340 aa16.93■□□□□ 0.3
HOXC6-202ENST00000394331 STACQ99469 402 aa16.93■□□□□ 0.3
HOXC6-202ENST00000394331 SCRT1Q9BWW7 348 aa16.93■□□□□ 0.3
HOXC6-202ENST00000394331 TAF9BQ9HBM6 251 aa16.93■□□□□ 0.3
HOXC6-202ENST00000394331 CENPVL1A0A0U1RR11 272 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms