RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 BAIAP2Q9UQB8 552 aa6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 STARD10Q9Y365 291 aa6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 AP4S1Q9Y587 144 aa6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 CACNG2Q9Y698 323 aa6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 COMMD3-BMI1R4GMX3 469 aa6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 PLCE1Q9P212 2302 aa6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 CUBNO60494 3623 aa6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 MTORP42345 2549 aa6.54□□□□□ -1.36
HMGB3P1-201ENST00000393368 LRP5LA4QPB2 252 aa6.54□□□□□ -1.36
HMGB3P1-201ENST00000393368 C5orf63A6NC05 138 aa6.54□□□□□ -1.36
HMGB3P1-201ENST00000393368 SAC3D1A6NKF1 404 aa6.54□□□□□ -1.36
HMGB3P1-201ENST00000393368 C17orf100A8MU93 164 aa6.54□□□□□ -1.36
HMGB3P1-201ENST00000393368 VWC2LB2RUY7 222 aa6.54□□□□□ -1.36
HMGB3P1-201ENST00000393368 WNT9BO14905 357 aa6.54□□□□□ -1.36
HMGB3P1-201ENST00000393368 SURF4O15260 269 aa6.54□□□□□ -1.36
HMGB3P1-201ENST00000393368 DEAF1O75398 565 aaPredicted RBP6.54□□□□□ -1.36
HMGB3P1-201ENST00000393368 IFNGP01579 166 aa6.54□□□□□ -1.36
HMGB3P1-201ENST00000393368 IGHV1-46P01743 117 aa6.54□□□□□ -1.36
HMGB3P1-201ENST00000393368 IGHV3-13P01766 116 aa6.54□□□□□ -1.36
HMGB3P1-201ENST00000393368 ERCC1P07992 297 aaPredicted RBP6.54□□□□□ -1.36
HMGB3P1-201ENST00000393368 COX5BP10606 129 aa6.54□□□□□ -1.36
HMGB3P1-201ENST00000393368 SLC25A16P16260 332 aa6.54□□□□□ -1.36
HMGB3P1-201ENST00000393368 ZNF823P16415 610 aa6.54□□□□□ -1.36
HMGB3P1-201ENST00000393368 ZNF16P17020 682 aaPredicted RBP6.54□□□□□ -1.36
HMGB3P1-201ENST00000393368 ZNF23P17027 643 aa6.54□□□□□ -1.36
HMGB3P1-201ENST00000393368 EPHA2P29317 976 aa6.54□□□□□ -1.36
HMGB3P1-201ENST00000393368 IL2RGP31785 369 aa6.54□□□□□ -1.36
HMGB3P1-201ENST00000393368 NR4A2P43354 598 aa6.54□□□□□ -1.36
HMGB3P1-201ENST00000393368 ARHGDIAP52565 204 aa6.54□□□□□ -1.36
HMGB3P1-201ENST00000393368 SLC25A1P53007 311 aa6.54□□□□□ -1.36
HMGB3P1-201ENST00000393368 DSCR9P59020 149 aa6.54□□□□□ -1.36
HMGB3P1-201ENST00000393368 SELENOVP59797 346 aa6.54□□□□□ -1.36
HMGB3P1-201ENST00000393368 CCL8P80075 99 aa6.54□□□□□ -1.36
HMGB3P1-201ENST00000393368 PSG7Q13046 419 aa6.54□□□□□ -1.36
HMGB3P1-201ENST00000393368 GK3PQ14409 553 aa6.54□□□□□ -1.36
HMGB3P1-201ENST00000393368 KPNB1Q14974 876 aaKnown RBP6.54□□□□□ -1.36
HMGB3P1-201ENST00000393368 RSPO1Q2MKA7 263 aaPredicted RBP6.54□□□□□ -1.36
HMGB3P1-201ENST00000393368 ZNF718Q3SXZ3 478 aa6.54□□□□□ -1.36
HMGB3P1-201ENST00000393368 LINC01590Q5TEZ4 76 aa6.54□□□□□ -1.36
HMGB3P1-201ENST00000393368 MBNL2Q5VZF2 373 aaKnown RBP6.54□□□□□ -1.36
HMGB3P1-201ENST00000393368 SLC27A4Q6P1M0 643 aa6.54□□□□□ -1.36
HMGB3P1-201ENST00000393368 FAHD1Q6P587 224 aa6.54□□□□□ -1.36
HMGB3P1-201ENST00000393368 ZNF771Q7L3S4 317 aaPredicted RBP6.54□□□□□ -1.36
HMGB3P1-201ENST00000393368 DCXRQ7Z4W1 244 aa6.54□□□□□ -1.36
HMGB3P1-201ENST00000393368 OR5AS1Q8N127 324 aa6.54□□□□□ -1.36
HMGB3P1-201ENST00000393368 OR2AJ1Q8NGZ0 328 aa6.54□□□□□ -1.36
HMGB3P1-201ENST00000393368 OR5K1Q8NHB7 308 aa6.54□□□□□ -1.36
HMGB3P1-201ENST00000393368 UBASH3BQ8TF42 649 aa6.54□□□□□ -1.36
HMGB3P1-201ENST00000393368 SNX33Q8WV41 574 aa6.54□□□□□ -1.36
HMGB3P1-201ENST00000393368 NEU4Q8WWR8 484 aaPredicted RBP6.54□□□□□ -1.36
HMGB3P1-201ENST00000393368 ZMYND19Q96E35 227 aaPredicted RBP6.54□□□□□ -1.36
HMGB3P1-201ENST00000393368 AMELYQ99218 206 aa6.54□□□□□ -1.36
HMGB3P1-201ENST00000393368 COQ7Q99807 217 aa6.54□□□□□ -1.36
HMGB3P1-201ENST00000393368 SOX7Q9BT81 388 aa6.54□□□□□ -1.36
HMGB3P1-201ENST00000393368 HDHD2Q9H0R4 259 aa6.54□□□□□ -1.36
HMGB3P1-201ENST00000393368 OR51V1Q9H2C8 321 aa6.54□□□□□ -1.36
HMGB3P1-201ENST00000393368 MMADHCQ9H3L0 296 aaPredicted RBP6.54□□□□□ -1.36
HMGB3P1-201ENST00000393368 MS4A5Q9H3V2 200 aa6.54□□□□□ -1.36
HMGB3P1-201ENST00000393368 NARFLQ9H6Q4 476 aa6.54□□□□□ -1.36
HMGB3P1-201ENST00000393368 PAPOLBQ9NRJ5 636 aaKnown RBP6.54□□□□□ -1.36
HMGB3P1-201ENST00000393368 CMC2Q9NRP2 79 aa6.54□□□□□ -1.36
HMGB3P1-201ENST00000393368 MED13LQ71F56 2210 aa6.54□□□□□ -1.36
HMGB3P1-201ENST00000393368 ARID1AO14497 2285 aa6.53□□□□□ -1.36
HMGB3P1-201ENST00000393368 LOC390937A0A1W2PQ73 354 aa6.53□□□□□ -1.36
HMGB3P1-201ENST00000393368 G3V2T6 193 aa6.53□□□□□ -1.36
HMGB3P1-201ENST00000393368 H3BNX3 289 aa6.53□□□□□ -1.36
HMGB3P1-201ENST00000393368 ZNF593O00488 134 aaPredicted RBP6.53□□□□□ -1.36
HMGB3P1-201ENST00000393368 TPD52L2O43399 206 aaKnown RBP6.53□□□□□ -1.36
HMGB3P1-201ENST00000393368 TIMM8AO60220 97 aaPredicted RBP6.53□□□□□ -1.36
HMGB3P1-201ENST00000393368 SELENOFO60613 162 aa6.53□□□□□ -1.36
HMGB3P1-201ENST00000393368 ICMTO60725 284 aa6.53□□□□□ -1.36
HMGB3P1-201ENST00000393368 LILRA1O75019 489 aa6.53□□□□□ -1.36
HMGB3P1-201ENST00000393368 CSF3P09919 207 aa6.53□□□□□ -1.36
HMGB3P1-201ENST00000393368 ACSM4P0C7M7 580 aa6.53□□□□□ -1.36
HMGB3P1-201ENST00000393368 SLC2A1P11166 492 aa6.53□□□□□ -1.36
HMGB3P1-201ENST00000393368 ANXA8P13928 327 aa6.53□□□□□ -1.36
HMGB3P1-201ENST00000393368 HOXB4P17483 251 aaPredicted RBP6.53□□□□□ -1.36
HMGB3P1-201ENST00000393368 USF1P22415 310 aaPredicted RBP6.53□□□□□ -1.36
HMGB3P1-201ENST00000393368 FASP25445 335 aa6.53□□□□□ -1.36
HMGB3P1-201ENST00000393368 FMO3P31513 532 aa6.53□□□□□ -1.36
HMGB3P1-201ENST00000393368 NAA10P41227 235 aaPredicted RBP6.53□□□□□ -1.36
HMGB3P1-201ENST00000393368 ENTPD1P49961 510 aa6.53□□□□□ -1.36
HMGB3P1-201ENST00000393368 ZNF81P51508 661 aa6.53□□□□□ -1.36
HMGB3P1-201ENST00000393368 MMP15P51511 669 aa6.53□□□□□ -1.36
HMGB3P1-201ENST00000393368 CDK5Q00535 292 aa6.53□□□□□ -1.36
HMGB3P1-201ENST00000393368 TMEM249Q2WGJ8 235 aa6.53□□□□□ -1.36
HMGB3P1-201ENST00000393368 KRTAP27-1Q3LI81 207 aa6.53□□□□□ -1.36
HMGB3P1-201ENST00000393368 KLHL12Q53G59 568 aa6.53□□□□□ -1.36
HMGB3P1-201ENST00000393368 AVPI1Q5T686 147 aa6.53□□□□□ -1.36
HMGB3P1-201ENST00000393368 OR2T2Q6IF00 324 aa6.53□□□□□ -1.36
HMGB3P1-201ENST00000393368 BCDIN3DQ7Z5W3 292 aaKnown RBP6.53□□□□□ -1.36
HMGB3P1-201ENST00000393368 ERI1Q8IV48 349 aaKnown RBP6.53□□□□□ -1.36
HMGB3P1-201ENST00000393368 CPOQ8IVL8 374 aa6.53□□□□□ -1.36
HMGB3P1-201ENST00000393368 ZNF786Q8N393 782 aa6.53□□□□□ -1.36
HMGB3P1-201ENST00000393368 PTP4A1Q93096 173 aa6.53□□□□□ -1.36
HMGB3P1-201ENST00000393368 CMBLQ96DG6 245 aa6.53□□□□□ -1.36
HMGB3P1-201ENST00000393368 DUS3LQ96G46 650 aaKnown RBP6.53□□□□□ -1.36
HMGB3P1-201ENST00000393368 ATF6BQ99941 703 aa6.53□□□□□ -1.36
HMGB3P1-201ENST00000393368 PKP2Q99959 881 aa6.53□□□□□ -1.36
HMGB3P1-201ENST00000393368 WACQ9BTA9 647 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms