RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 SEC22CQ9BRL7 303 aa14.96□□□□□ -0.02
SCN3B-202ENST00000392770 EXOSC3Q9NQT5 275 aaKnown RBP14.96□□□□□ -0.02
SCN3B-202ENST00000392770 EXOGQ9Y2C4 368 aaKnown RBP14.96□□□□□ -0.02
SCN3B-202ENST00000392770 D6RAR5 112 aa14.95□□□□□ -0.02
SCN3B-202ENST00000392770 TSPAN15O95858 294 aa14.95□□□□□ -0.02
SCN3B-202ENST00000392770 ANXA7P20073 488 aaKnown RBP14.95□□□□□ -0.02
SCN3B-202ENST00000392770 TUBG1P23258 451 aa14.95□□□□□ -0.02
SCN3B-202ENST00000392770 NPY4RP50391 375 aa14.95□□□□□ -0.02
SCN3B-202ENST00000392770 NOVA1P51513 510 aaKnown RBP14.95□□□□□ -0.02
SCN3B-202ENST00000392770 SHBQ15464 509 aa14.95□□□□□ -0.02
SCN3B-202ENST00000392770 OTOSQ8NHW6 89 aa14.95□□□□□ -0.02
SCN3B-202ENST00000392770 GNRHR2Q96P88 292 aa14.95□□□□□ -0.02
SCN3B-202ENST00000392770 A0A1B0GTQ1 180 aa14.95□□□□□ -0.02
SCN3B-202ENST00000392770 OR6C65A6NJZ3 312 aa14.95□□□□□ -0.02
SCN3B-202ENST00000392770 HRKO00198 91 aa14.95□□□□□ -0.02
SCN3B-202ENST00000392770 FABP7O15540 132 aa14.95□□□□□ -0.02
SCN3B-202ENST00000392770 SLC25A1P53007 311 aa14.95□□□□□ -0.02
SCN3B-202ENST00000392770 CAMK2BQ13554 666 aa14.95□□□□□ -0.02
SCN3B-202ENST00000392770 LAIR1Q6GTX8 287 aa14.95□□□□□ -0.02
SCN3B-202ENST00000392770 SEC22AQ96IW7 307 aa14.95□□□□□ -0.02
SCN3B-202ENST00000392770 SPACA5Q96QH8 159 aa14.95□□□□□ -0.02
SCN3B-202ENST00000392770 ZNF436Q9C0F3 470 aaPredicted RBP14.95□□□□□ -0.02
SCN3B-202ENST00000392770 DHHO43323 396 aa14.95□□□□□ -0.02
SCN3B-202ENST00000392770 C11orf40Q8WZ69 217 aa14.95□□□□□ -0.02
SCN3B-202ENST00000392770 CPNE4Q96A23 557 aaPredicted RBP14.95□□□□□ -0.02
SCN3B-202ENST00000392770 BCL2A1Q16548 175 aa14.95□□□□□ -0.02
SCN3B-202ENST00000392770 SLC25A35Q3KQZ1 300 aa14.95□□□□□ -0.02
SCN3B-202ENST00000392770 C2orf76Q3KRA6 126 aa14.95□□□□□ -0.02
SCN3B-202ENST00000392770 PTTG3PQ9NZH4 202 aa14.95□□□□□ -0.02
SCN3B-202ENST00000392770 LRP12Q9Y561 859 aa14.95□□□□□ -0.02
SCN3B-202ENST00000392770 LCTP09848 1927 aa14.95□□□□□ -0.02
SCN3B-202ENST00000392770 HS3ST1O14792 307 aa14.95□□□□□ -0.02
SCN3B-202ENST00000392770 MPPED1O15442 326 aa14.95□□□□□ -0.02
SCN3B-202ENST00000392770 OR8G1Q15617 311 aa14.95□□□□□ -0.02
SCN3B-202ENST00000392770 ARL11Q969Q4 196 aa14.95□□□□□ -0.02
SCN3B-202ENST00000392770 SLC25A31Q9H0C2 315 aa14.95□□□□□ -0.02
SCN3B-202ENST00000392770 HSD17B6O14756 317 aa14.94□□□□□ -0.02
SCN3B-202ENST00000392770 DEGS1O15121 323 aa14.94□□□□□ -0.02
SCN3B-202ENST00000392770 OGFOD3Q6PK18 319 aa14.94□□□□□ -0.02
SCN3B-202ENST00000392770 OR51F2Q8NH61 342 aa14.94□□□□□ -0.02
SCN3B-202ENST00000392770 ERVMER34-1Q9H9K5 563 aa14.94□□□□□ -0.02
SCN3B-202ENST00000392770 BCO1Q9HAY6 547 aa14.94□□□□□ -0.02
SCN3B-202ENST00000392770 AKIP1Q9NQ31 210 aa14.94□□□□□ -0.02
SCN3B-202ENST00000392770 RPS27AP62979 156 aaKnown RBP14.94□□□□□ -0.02
SCN3B-202ENST00000392770 UBA52P62987 128 aaKnown RBP14.94□□□□□ -0.02
SCN3B-202ENST00000392770 EBPQ15125 230 aaKnown RBP14.94□□□□□ -0.02
SCN3B-202ENST00000392770 CBLN3Q6UW01 205 aa14.94□□□□□ -0.02
SCN3B-202ENST00000392770 RAB39BQ96DA2 213 aa14.94□□□□□ -0.02
SCN3B-202ENST00000392770 VSTM2LQ96N03 204 aa14.94□□□□□ -0.02
SCN3B-202ENST00000392770 IGHV5-10-1A0A0J9YXX1 117 aa14.94□□□□□ -0.02
SCN3B-202ENST00000392770 GLSO94925 669 aaPredicted RBP14.94□□□□□ -0.02
SCN3B-202ENST00000392770 PSG6Q00889 435 aa14.94□□□□□ -0.02
SCN3B-202ENST00000392770 KCNJ8Q15842 424 aa14.94□□□□□ -0.02
SCN3B-202ENST00000392770 SLC7A5P1Q8MH63 180 aa14.94□□□□□ -0.02
SCN3B-202ENST00000392770 SLC35B4Q969S0 331 aa14.94□□□□□ -0.02
SCN3B-202ENST00000392770 ADGRL4Q9HBW9 690 aa14.94□□□□□ -0.02
SCN3B-202ENST00000392770 CDC42EP2O14613 210 aa14.94□□□□□ -0.02
SCN3B-202ENST00000392770 FFAR1O14842 300 aa14.94□□□□□ -0.02
SCN3B-202ENST00000392770 PRSS23O95084 383 aa14.94□□□□□ -0.02
SCN3B-202ENST00000392770 FAM27D1Q5T7N8 215 aa14.94□□□□□ -0.02
SCN3B-202ENST00000392770 TEX19Q8NA77 164 aa14.94□□□□□ -0.02
SCN3B-202ENST00000392770 CEBPZOSA8MTT3 80 aa14.93□□□□□ -0.02
SCN3B-202ENST00000392770 ETV6P41212 452 aa14.93□□□□□ -0.02
SCN3B-202ENST00000392770 OR4D6Q8NGJ1 314 aa14.93□□□□□ -0.02
SCN3B-202ENST00000392770 CNTNAP3BQ96NU0 1288 aa14.93□□□□□ -0.02
SCN3B-202ENST00000392770 XRCC2O43543 280 aa14.93□□□□□ -0.02
SCN3B-202ENST00000392770 NTN1O95631 604 aa14.93□□□□□ -0.02
SCN3B-202ENST00000392770 PMS2P2O95744 297 aa14.93□□□□□ -0.02
SCN3B-202ENST00000392770 NRASP01111 189 aa14.93□□□□□ -0.02
SCN3B-202ENST00000392770 EVX1P49640 407 aa14.93□□□□□ -0.02
SCN3B-202ENST00000392770 GZMMP51124 257 aa14.93□□□□□ -0.02
SCN3B-202ENST00000392770 FMODQ06828 376 aa14.93□□□□□ -0.02
SCN3B-202ENST00000392770 CROCCQ5TZA2 2017 aa14.93□□□□□ -0.02
SCN3B-202ENST00000392770 TRAV1-2A0A0B4J238 106 aa14.93□□□□□ -0.02
SCN3B-202ENST00000392770 LPCAT3Q6P1A2 487 aa14.93□□□□□ -0.02
SCN3B-202ENST00000392770 ZNF687Q8N1G0 1237 aa14.93□□□□□ -0.02
SCN3B-202ENST00000392770 CT55Q8WUE5 264 aa14.93□□□□□ -0.02
SCN3B-202ENST00000392770 C10orf90Q96M02 699 aa14.93□□□□□ -0.02
SCN3B-202ENST00000392770 CRLF2Q9HC73 371 aa14.93□□□□□ -0.02
SCN3B-202ENST00000392770 PRELID1Q9Y255 219 aa14.93□□□□□ -0.02
SCN3B-202ENST00000392770 IGKV1-8A0A0C4DH67 115 aa14.93□□□□□ -0.02
SCN3B-202ENST00000392770 PMS2P1A4D2B8 440 aa14.93□□□□□ -0.02
SCN3B-202ENST00000392770 OR6C68A6NDL8 312 aa14.93□□□□□ -0.02
SCN3B-202ENST00000392770 OR6C6A6NF89 314 aa14.93□□□□□ -0.02
SCN3B-202ENST00000392770 SCGB2A1O75556 95 aa14.93□□□□□ -0.02
SCN3B-202ENST00000392770 GNB3P16520 340 aa14.93□□□□□ -0.02
SCN3B-202ENST00000392770 GALNSP34059 522 aa14.93□□□□□ -0.02
SCN3B-202ENST00000392770 PLXDC2Q6UX71 529 aa14.93□□□□□ -0.02
SCN3B-202ENST00000392770 OR52H1Q8NGJ2 320 aa14.93□□□□□ -0.02
SCN3B-202ENST00000392770 PAQR8Q8TEZ7 354 aa14.93□□□□□ -0.02
SCN3B-202ENST00000392770 FBXL2Q9UKC9 423 aa14.93□□□□□ -0.02
SCN3B-202ENST00000392770 S100A2P29034 98 aa14.93□□□□□ -0.02
SCN3B-202ENST00000392770 IDH3GP51553 393 aaPredicted RBP14.93□□□□□ -0.02
SCN3B-202ENST00000392770 ALKBH3Q96Q83 286 aaPredicted RBP14.93□□□□□ -0.02
SCN3B-202ENST00000392770 PATE3B3GLJ2 98 aa14.92□□□□□ -0.02
SCN3B-202ENST00000392770 FOXC1Q12948 553 aa14.92□□□□□ -0.02
SCN3B-202ENST00000392770 CATR1Q13166 79 aa14.92□□□□□ -0.02
SCN3B-202ENST00000392770 FZD5Q13467 585 aa14.92□□□□□ -0.02
SCN3B-202ENST00000392770 TRIP6Q15654 476 aaKnown RBP14.92□□□□□ -0.02
SCN3B-202ENST00000392770 HES3Q5TGS1 186 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms