RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 ZNF679Q8IYX0 411 aa17.06■□□□□ 0.32
CSPG5-202ENST00000383738 DTWD2Q8NBA8 298 aa17.06■□□□□ 0.32
CSPG5-202ENST00000383738 RAB40AQ8WXH6 277 aa17.06■□□□□ 0.32
CSPG5-202ENST00000383738 B3GALT1Q9Y5Z6 326 aa17.06■□□□□ 0.32
CSPG5-202ENST00000383738 TP53BP1Q12888 1972 aaPredicted RBP17.06■□□□□ 0.32
CSPG5-202ENST00000383738 NOTCH2Q04721 2471 aa17.05■□□□□ 0.32
CSPG5-202ENST00000383738 SPAARA0A1B0GVQ0 90 aa17.05■□□□□ 0.32
CSPG5-202ENST00000383738 MED19A0JLT2 244 aaPredicted RBP17.05■□□□□ 0.32
CSPG5-202ENST00000383738 DDAH2O95865 285 aa17.05■□□□□ 0.32
CSPG5-202ENST00000383738 ICAM2P13598 275 aa17.05■□□□□ 0.32
CSPG5-202ENST00000383738 TBXA2RP21731 343 aa17.05■□□□□ 0.32
CSPG5-202ENST00000383738 CDK5Q00535 292 aa17.05■□□□□ 0.32
CSPG5-202ENST00000383738 SPIN3Q5JUX0 258 aa17.05■□□□□ 0.32
CSPG5-202ENST00000383738 HACD4Q5VWC8 232 aa17.05■□□□□ 0.32
CSPG5-202ENST00000383738 NAA40Q86UY6 237 aa17.05■□□□□ 0.32
CSPG5-202ENST00000383738 PNLDC1Q8NA58 520 aaKnown RBP17.05■□□□□ 0.32
CSPG5-202ENST00000383738 WDR34Q96EX3 536 aa17.05■□□□□ 0.32
CSPG5-202ENST00000383738 KLHL15Q96M94 604 aa17.05■□□□□ 0.32
CSPG5-202ENST00000383738 STACQ99469 402 aa17.05■□□□□ 0.32
CSPG5-202ENST00000383738 DEFB127Q9H1M4 99 aa17.05■□□□□ 0.32
CSPG5-202ENST00000383738 PCDHB10Q9UN67 800 aa17.05■□□□□ 0.32
CSPG5-202ENST00000383738 ABCA4P78363 2273 aa17.05■□□□□ 0.32
CSPG5-202ENST00000383738 AIPO00170 330 aa17.05■□□□□ 0.32
CSPG5-202ENST00000383738 FASLGP48023 281 aa17.05■□□□□ 0.32
CSPG5-202ENST00000383738 CSNK1A1P48729 337 aa17.05■□□□□ 0.32
CSPG5-202ENST00000383738 MUC20Q8N307 709 aaPredicted RBP17.05■□□□□ 0.32
CSPG5-202ENST00000383738 ZNF611Q8N823 705 aa17.05■□□□□ 0.32
CSPG5-202ENST00000383738 NT5CQ8TCD5 201 aa17.05■□□□□ 0.32
CSPG5-202ENST00000383738 MS4A3Q96HJ5 214 aa17.05■□□□□ 0.32
CSPG5-202ENST00000383738 ULBP2Q9BZM5 246 aa17.05■□□□□ 0.32
CSPG5-202ENST00000383738 LRRC37A2A6NM11 1700 aa17.05■□□□□ 0.32
CSPG5-202ENST00000383738 PRSS53Q2L4Q9 553 aa17.05■□□□□ 0.32
CSPG5-202ENST00000383738 THSD4Q6ZMP0 1018 aa17.05■□□□□ 0.32
CSPG5-202ENST00000383738 TSEN54Q7Z6J9 526 aaKnown RBP17.05■□□□□ 0.32
CSPG5-202ENST00000383738 GLRX5Q86SX6 157 aa17.05■□□□□ 0.32
CSPG5-202ENST00000383738 SPACA5Q96QH8 159 aa17.05■□□□□ 0.32
CSPG5-202ENST00000383738 KCNJ16Q9NPI9 418 aa17.05■□□□□ 0.32
CSPG5-202ENST00000383738 KIF25Q9UIL4 384 aa17.05■□□□□ 0.32
CSPG5-202ENST00000383738 A0A0D9SG52 128 aa17.04■□□□□ 0.32
CSPG5-202ENST00000383738 A6NLC8 198 aa17.04■□□□□ 0.32
CSPG5-202ENST00000383738 ABOP16442 354 aa17.04■□□□□ 0.32
CSPG5-202ENST00000383738 FXYD4P59646 89 aa17.04■□□□□ 0.32
CSPG5-202ENST00000383738 SNRPNP63162 240 aaKnown RBP17.04■□□□□ 0.32
CSPG5-202ENST00000383738 PLA1AQ53H76 456 aa17.04■□□□□ 0.32
CSPG5-202ENST00000383738 C1orf140Q5VVS0 124 aa17.04■□□□□ 0.32
CSPG5-202ENST00000383738 OR5D18Q8NGL1 313 aa17.04■□□□□ 0.32
CSPG5-202ENST00000383738 PPP1R1CQ8WVI7 109 aa17.04■□□□□ 0.32
CSPG5-202ENST00000383738 C10orf90Q96M02 699 aa17.04■□□□□ 0.32
CSPG5-202ENST00000383738 LAMA3Q16787 3333 aa17.04■□□□□ 0.32
CSPG5-202ENST00000383738 CENPVL1A0A0U1RR11 272 aa17.04■□□□□ 0.32
CSPG5-202ENST00000383738 ZNF705GA8MUZ8 300 aaPredicted RBP17.04■□□□□ 0.32
CSPG5-202ENST00000383738 C4orf51C9J302 202 aa17.04■□□□□ 0.32
CSPG5-202ENST00000383738 GDF9O60383 454 aa17.04■□□□□ 0.32
CSPG5-202ENST00000383738 OR2T7P0C7T2 308 aa17.04■□□□□ 0.32
CSPG5-202ENST00000383738 GPR3P46089 330 aa17.04■□□□□ 0.32
CSPG5-202ENST00000383738 P2RX1P51575 399 aa17.04■□□□□ 0.32
CSPG5-202ENST00000383738 PCBP3P57721 371 aaKnown RBP17.04■□□□□ 0.32
CSPG5-202ENST00000383738 DUSP8Q13202 625 aa17.04■□□□□ 0.32
CSPG5-202ENST00000383738 ABHD12BQ7Z5M8 362 aaPredicted RBP17.04■□□□□ 0.32
CSPG5-202ENST00000383738 BATF2Q8N1L9 274 aa17.04■□□□□ 0.32
CSPG5-202ENST00000383738 OR4S1Q8NGB4 309 aa17.04■□□□□ 0.32
CSPG5-202ENST00000383738 OR2T27Q8NH04 317 aa17.04■□□□□ 0.32
CSPG5-202ENST00000383738 ZNF845Q96IR2 970 aaPredicted RBP17.04■□□□□ 0.32
CSPG5-202ENST00000383738 USB1Q9BQ65 265 aaKnown RBP17.04■□□□□ 0.32
CSPG5-202ENST00000383738 SELENOIQ9C0D9 397 aa17.04■□□□□ 0.32
CSPG5-202ENST00000383738 ZFP64Q9NPA5 681 aa17.04■□□□□ 0.32
CSPG5-202ENST00000383738 HIF3AQ9Y2N7 669 aa17.04■□□□□ 0.32
CSPG5-202ENST00000383738 PTBP1P26599 531 aaKnown RBP eCLIP17.04■□□□□ 0.32
CSPG5-202ENST00000383738 SCMH1Q96GD3 660 aa17.04■□□□□ 0.32
CSPG5-202ENST00000383738 GHITMQ9H3K2 345 aa17.04■□□□□ 0.32
CSPG5-202ENST00000383738 LSM2Q9Y333 95 aaKnown RBP17.04■□□□□ 0.32
CSPG5-202ENST00000383738 TMEM269A0A1B0GVZ9 245 aa17.03■□□□□ 0.32
CSPG5-202ENST00000383738 NQO2P16083 231 aa17.03■□□□□ 0.32
CSPG5-202ENST00000383738 CXCL2P19875 107 aa17.03■□□□□ 0.32
CSPG5-202ENST00000383738 OR1S2Q8NGQ3 325 aa17.03■□□□□ 0.32
CSPG5-202ENST00000383738 FKRPQ9H9S5 495 aa17.03■□□□□ 0.32
CSPG5-202ENST00000383738 MED17Q9NVC6 651 aa17.03■□□□□ 0.32
CSPG5-202ENST00000383738 C14orf166Q9Y224 244 aaKnown RBP17.03■□□□□ 0.32
CSPG5-202ENST00000383738 DTX4Q9Y2E6 619 aa17.03■□□□□ 0.32
CSPG5-202ENST00000383738 ABCD3P28288 659 aa17.03■□□□□ 0.32
CSPG5-202ENST00000383738 CBX5P45973 191 aa17.03■□□□□ 0.32
CSPG5-202ENST00000383738 POLR2HP52434 150 aaKnown RBP17.03■□□□□ 0.32
CSPG5-202ENST00000383738 NDUFA6P56556 154 aa17.03■□□□□ 0.32
CSPG5-202ENST00000383738 TAS2R19P59542 299 aa17.03■□□□□ 0.32
CSPG5-202ENST00000383738 AWAT2Q6E213 333 aa17.03■□□□□ 0.32
CSPG5-202ENST00000383738 NPAS1Q99742 590 aa17.03■□□□□ 0.32
CSPG5-202ENST00000383738 C12orf49Q9H741 205 aa17.03■□□□□ 0.32
CSPG5-202ENST00000383738 LRFN1Q9P244 771 aa17.03■□□□□ 0.32
CSPG5-202ENST00000383738 BLACEA4D250 179 aa17.03■□□□□ 0.32
CSPG5-202ENST00000383738 YKT6O15498 198 aa17.03■□□□□ 0.32
CSPG5-202ENST00000383738 SYT7O43581 403 aa17.03■□□□□ 0.32
CSPG5-202ENST00000383738 ERCC1P07992 297 aaPredicted RBP17.03■□□□□ 0.32
CSPG5-202ENST00000383738 CD14P08571 375 aa17.03■□□□□ 0.32
CSPG5-202ENST00000383738 BDKRB2P30411 391 aa17.03■□□□□ 0.32
CSPG5-202ENST00000383738 ZNF273Q14593 569 aa17.03■□□□□ 0.32
CSPG5-202ENST00000383738 PRTGQ2VWP7 1150 aa17.03■□□□□ 0.32
CSPG5-202ENST00000383738 Q499Y3 187 aa17.03■□□□□ 0.32
CSPG5-202ENST00000383738 LRRC69Q6ZNQ3 347 aa17.03■□□□□ 0.32
CSPG5-202ENST00000383738 OR10G3Q8NGC4 313 aa17.03■□□□□ 0.32
CSPG5-202ENST00000383738 STK35Q8TDR2 534 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms