RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 OGFOD3Q6PK18 319 aa14.54□□□□□ -0.08
NKX3-1-201ENST00000380871 RHOUQ7L0Q8 258 aa14.54□□□□□ -0.08
NKX3-1-201ENST00000380871 HLA-CQ95604 372 aa14.54□□□□□ -0.08
NKX3-1-201ENST00000380871 AIFM2Q9BRQ8 373 aa14.54□□□□□ -0.08
NKX3-1-201ENST00000380871 COA3Q9Y2R0 106 aaPredicted RBP14.54□□□□□ -0.08
NKX3-1-201ENST00000380871 PI4KAP42356 2102 aa14.54□□□□□ -0.08
NKX3-1-201ENST00000380871 TIAF1O95411 115 aa14.54□□□□□ -0.08
NKX3-1-201ENST00000380871 CADM4Q8NFZ8 388 aa14.54□□□□□ -0.08
NKX3-1-201ENST00000380871 STT3BQ8TCJ2 826 aa14.54□□□□□ -0.08
NKX3-1-201ENST00000380871 MRGPRFQ96AM1 343 aa14.54□□□□□ -0.08
NKX3-1-201ENST00000380871 LRRC46Q96FV0 321 aa14.54□□□□□ -0.08
NKX3-1-201ENST00000380871 OR6C1Q96RD1 312 aa14.54□□□□□ -0.08
NKX3-1-201ENST00000380871 VRK1Q99986 396 aaPredicted RBP14.54□□□□□ -0.08
NKX3-1-201ENST00000380871 WWTR1Q9GZV5 400 aa14.54□□□□□ -0.08
NKX3-1-201ENST00000380871 TAS2R3Q9NYW6 316 aa14.54□□□□□ -0.08
NKX3-1-201ENST00000380871 ARID1AO14497 2285 aa14.54□□□□□ -0.08
NKX3-1-201ENST00000380871 SDK2Q58EX2 2172 aa14.54□□□□□ -0.08
NKX3-1-201ENST00000380871 EIF1AYO14602 144 aaKnown RBP14.54□□□□□ -0.08
NKX3-1-201ENST00000380871 CD34P28906 385 aa14.54□□□□□ -0.08
NKX3-1-201ENST00000380871 FBXW4P57775 412 aa14.54□□□□□ -0.08
NKX3-1-201ENST00000380871 RPL27P61353 136 aaKnown RBP14.54□□□□□ -0.08
NKX3-1-201ENST00000380871 GUSBP11Q6P575 273 aa14.54□□□□□ -0.08
NKX3-1-201ENST00000380871 BPIFCQ8NFQ6 507 aa14.54□□□□□ -0.08
NKX3-1-201ENST00000380871 OR5M8Q8NGP6 311 aa14.54□□□□□ -0.08
NKX3-1-201ENST00000380871 OR13C3Q8NGS6 347 aa14.54□□□□□ -0.08
NKX3-1-201ENST00000380871 ZNF519Q8TB69 540 aa14.54□□□□□ -0.08
NKX3-1-201ENST00000380871 ZNF471Q9BX82 626 aaPredicted RBP14.54□□□□□ -0.08
NKX3-1-201ENST00000380871 RASL12Q9NYN1 266 aa14.54□□□□□ -0.08
NKX3-1-201ENST00000380871 TMED7Q9Y3B3 224 aa14.54□□□□□ -0.08
NKX3-1-201ENST00000380871 DNASE2O00115 360 aaPredicted RBP14.53□□□□□ -0.08
NKX3-1-201ENST00000380871 SOX1O00570 391 aaPredicted RBP14.53□□□□□ -0.08
NKX3-1-201ENST00000380871 IGKV3-11P04433 115 aa14.53□□□□□ -0.08
NKX3-1-201ENST00000380871 MGMTP16455 207 aa14.53□□□□□ -0.08
NKX3-1-201ENST00000380871 CFPP27918 469 aa14.53□□□□□ -0.08
NKX3-1-201ENST00000380871 AVPR2P30518 371 aa14.53□□□□□ -0.08
NKX3-1-201ENST00000380871 GLT8D1Q68CQ7 371 aa14.53□□□□□ -0.08
NKX3-1-201ENST00000380871 FDX2Q6P4F2 183 aa14.53□□□□□ -0.08
NKX3-1-201ENST00000380871 CATSPERDQ86XM0 798 aa14.53□□□□□ -0.08
NKX3-1-201ENST00000380871 ESX1Q8N693 406 aa14.53□□□□□ -0.08
NKX3-1-201ENST00000380871 TMEM229BQ8NBD8 167 aa14.53□□□□□ -0.08
NKX3-1-201ENST00000380871 PPP1R1CQ8WVI7 109 aa14.53□□□□□ -0.08
NKX3-1-201ENST00000380871 CKLFQ9UBR5 152 aa14.53□□□□□ -0.08
NKX3-1-201ENST00000380871 MMACHCQ9Y4U1 282 aa14.53□□□□□ -0.08
NKX3-1-201ENST00000380871 LOC107986453A0A1B0GWG9 222 aa14.53□□□□□ -0.08
NKX3-1-201ENST00000380871 A0A1B0GX78 115 aa14.53□□□□□ -0.08
NKX3-1-201ENST00000380871 RNF222A6NCQ9 220 aa14.53□□□□□ -0.08
NKX3-1-201ENST00000380871 FRG2CA6NGY1 282 aa14.53□□□□□ -0.08
NKX3-1-201ENST00000380871 TPPPO94811 219 aa14.53□□□□□ -0.08
NKX3-1-201ENST00000380871 GLB1P16278 677 aa14.53□□□□□ -0.08
NKX3-1-201ENST00000380871 RIDAP52758 137 aaKnown RBP14.53□□□□□ -0.08
NKX3-1-201ENST00000380871 CCDC107Q8WV48 283 aa14.53□□□□□ -0.08
NKX3-1-201ENST00000380871 NUDCD2Q8WVJ2 157 aa14.53□□□□□ -0.08
NKX3-1-201ENST00000380871 WNT2BQ93097 391 aa14.53□□□□□ -0.08
NKX3-1-201ENST00000380871 MARC2Q969Z3 335 aa14.53□□□□□ -0.08
NKX3-1-201ENST00000380871 CST11Q9H112 138 aa14.53□□□□□ -0.08
NKX3-1-201ENST00000380871 ALX4Q9H161 411 aaPredicted RBP14.53□□□□□ -0.08
NKX3-1-201ENST00000380871 DUSP15Q9H1R2 295 aaPredicted RBP14.53□□□□□ -0.08
NKX3-1-201ENST00000380871 URB1O60287 2271 aaKnown RBP14.53□□□□□ -0.08
NKX3-1-201ENST00000380871 TRAV36DV7A0A075B6V5 113 aa14.53□□□□□ -0.08
NKX3-1-201ENST00000380871 H3BML4 177 aa14.53□□□□□ -0.08
NKX3-1-201ENST00000380871 ZNF354AO60765 605 aaPredicted RBP14.53□□□□□ -0.08
NKX3-1-201ENST00000380871 PPP1R1AQ13522 171 aa14.53□□□□□ -0.08
NKX3-1-201ENST00000380871 CDNFQ49AH0 187 aa14.53□□□□□ -0.08
NKX3-1-201ENST00000380871 PAPD4Q6PIY7 484 aaKnown RBP14.53□□□□□ -0.08
NKX3-1-201ENST00000380871 ADGRE4PQ86SQ3 457 aa14.53□□□□□ -0.08
NKX3-1-201ENST00000380871 C17orf82Q86X59 251 aaPredicted RBP14.53□□□□□ -0.08
NKX3-1-201ENST00000380871 FAM219AQ8IW50 185 aa14.53□□□□□ -0.08
NKX3-1-201ENST00000380871 CASTOR1Q8WTX7 329 aa14.53□□□□□ -0.08
NKX3-1-201ENST00000380871 ZNF587Q96SQ5 575 aaPredicted RBP14.53□□□□□ -0.08
NKX3-1-201ENST00000380871 RTTNQ86VV8 2226 aa14.52□□□□□ -0.08
NKX3-1-201ENST00000380871 A0A1B0GTI1 187 aa14.52□□□□□ -0.08
NKX3-1-201ENST00000380871 PHYHO14832 338 aa14.52□□□□□ -0.08
NKX3-1-201ENST00000380871 IGFBP3P17936 291 aaPredicted RBP14.52□□□□□ -0.08
NKX3-1-201ENST00000380871 STARP49675 285 aa14.52□□□□□ -0.08
NKX3-1-201ENST00000380871 COL19A1Q14993 1142 aa14.52□□□□□ -0.08
NKX3-1-201ENST00000380871 UNQ6126/PRO20091Q6UXV3 157 aa14.52□□□□□ -0.08
NKX3-1-201ENST00000380871 IQCF2Q8IXL9 164 aa14.52□□□□□ -0.08
NKX3-1-201ENST00000380871 CCNL2Q96S94 520 aaPredicted RBP14.52□□□□□ -0.08
NKX3-1-201ENST00000380871 LAT2Q9GZY6 243 aa14.52□□□□□ -0.08
NKX3-1-201ENST00000380871 AKIRIN1Q9H9L7 192 aaPredicted RBP14.52□□□□□ -0.08
NKX3-1-201ENST00000380871 TNFSF18Q9UNG2 199 aa14.52□□□□□ -0.08
NKX3-1-201ENST00000380871 TMEM131Q92545 1883 aa14.52□□□□□ -0.09
NKX3-1-201ENST00000380871 TMED7-TICAM2A0A0A6YYA0 188 aa14.52□□□□□ -0.09
NKX3-1-201ENST00000380871 IGKV1D-43A0A0B4J1Z2 117 aa14.52□□□□□ -0.09
NKX3-1-201ENST00000380871 BLACEA4D250 179 aa14.52□□□□□ -0.09
NKX3-1-201ENST00000380871 NUDT21O43809 227 aaKnown RBP14.52□□□□□ -0.09
NKX3-1-201ENST00000380871 CFIP05156 583 aa14.52□□□□□ -0.09
NKX3-1-201ENST00000380871 CD2P06729 351 aa14.52□□□□□ -0.09
NKX3-1-201ENST00000380871 DNASE1L1P49184 302 aa14.52□□□□□ -0.09
NKX3-1-201ENST00000380871 ARRB1P49407 418 aaPredicted RBP14.52□□□□□ -0.09
NKX3-1-201ENST00000380871 CCDC157Q569K6 752 aa14.52□□□□□ -0.09
NKX3-1-201ENST00000380871 SPEM1Q8N4L4 309 aa14.52□□□□□ -0.09
NKX3-1-201ENST00000380871 EIF4E3Q8N5X7 224 aaKnown RBP14.52□□□□□ -0.09
NKX3-1-201ENST00000380871 ZC3H10Q96K80 434 aaKnown RBP14.52□□□□□ -0.09
NKX3-1-201ENST00000380871 UPB1Q9UBR1 384 aa14.52□□□□□ -0.09
NKX3-1-201ENST00000380871 P2RY10O00398 339 aa14.51□□□□□ -0.09
NKX3-1-201ENST00000380871 HEXBP07686 556 aa14.51□□□□□ -0.09
NKX3-1-201ENST00000380871 DLSTP36957 453 aa14.51□□□□□ -0.09
NKX3-1-201ENST00000380871 CXADRP78310 365 aa14.51□□□□□ -0.09
NKX3-1-201ENST00000380871 ROM1Q03395 351 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms