RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 KCNRGQ8N5I3 272 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 AKR7LQ8NHP1 331 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 METTL21AQ8WXB1 218 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 TAAR8Q969N4 342 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 HAO2Q9NYQ3 351 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 SERTAD3Q9UJW9 196 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 TICRRQ7Z2Z1 1910 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 IGHV3-20A0A0C4DH32 117 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 EPOPA6NHQ4 379 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 RHPN2P1A8MT19 583 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 SCDO00767 359 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 ALOX12BO75342 701 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 DAOP14920 347 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 EIF2S3P41091 472 aaKnown RBP11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 RAB38P57729 211 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 SLC22A6Q4U2R8 563 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 WDR38Q5JTN6 314 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 GLYATL3Q5SZD4 288 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 GLT8D1Q68CQ7 371 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 KRT77Q7Z794 578 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 ZNF227Q86WZ6 799 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 SLC22A18ASQ8N1D0 253 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 ZNF383Q8NA42 475 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 TCTEX1D2Q8WW35 142 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 HAVCR1Q96D42 359 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 LYRM4Q9HD34 91 aa11.22□□□□□ -0.61
PRPF40B-202ENST00000380281 TMEM235A6NFC5 223 aa11.21□□□□□ -0.61
PRPF40B-202ENST00000380281 UPK3AO75631 287 aa11.21□□□□□ -0.61
PRPF40B-202ENST00000380281 PNPP00491 289 aa11.21□□□□□ -0.61
PRPF40B-202ENST00000380281 THEGLP0DJG4 465 aa11.21□□□□□ -0.61
PRPF40B-202ENST00000380281 VAMP1P23763 118 aa11.21□□□□□ -0.61
PRPF40B-202ENST00000380281 CXCR1P25024 350 aa11.21□□□□□ -0.61
PRPF40B-202ENST00000380281 CD96P40200 585 aa11.21□□□□□ -0.61
PRPF40B-202ENST00000380281 PSMD4P55036 377 aaKnown RBP11.21□□□□□ -0.61
PRPF40B-202ENST00000380281 RAB2AP61019 212 aa11.21□□□□□ -0.61
PRPF40B-202ENST00000380281 SKP1P63208 163 aa11.21□□□□□ -0.61
PRPF40B-202ENST00000380281 BIVMQ86UB2 503 aa11.21□□□□□ -0.61
PRPF40B-202ENST00000380281 STEAP2Q8NFT2 490 aa11.21□□□□□ -0.61
PRPF40B-202ENST00000380281 TMED6Q8WW62 240 aa11.21□□□□□ -0.61
PRPF40B-202ENST00000380281 ARL11Q969Q4 196 aa11.21□□□□□ -0.61
PRPF40B-202ENST00000380281 SLAMF9Q96A28 289 aa11.21□□□□□ -0.61
PRPF40B-202ENST00000380281 CCDC74AQ96AQ1 378 aa11.21□□□□□ -0.61
PRPF40B-202ENST00000380281 CTHRC1Q96CG8 243 aa11.21□□□□□ -0.61
PRPF40B-202ENST00000380281 MARS2Q96GW9 593 aaKnown RBP11.21□□□□□ -0.61
PRPF40B-202ENST00000380281 TSPAN32Q96QS1 320 aa11.21□□□□□ -0.61
PRPF40B-202ENST00000380281 RNF222A6NCQ9 220 aa11.21□□□□□ -0.62
PRPF40B-202ENST00000380281 YIF1AO95070 293 aa11.21□□□□□ -0.62
PRPF40B-202ENST00000380281 LAP3P28838 519 aa11.21□□□□□ -0.62
PRPF40B-202ENST00000380281 GNALP38405 381 aa11.21□□□□□ -0.62
PRPF40B-202ENST00000380281 ARRB1P49407 418 aaPredicted RBP11.21□□□□□ -0.62
PRPF40B-202ENST00000380281 SSX2Q16385 188 aa11.21□□□□□ -0.62
PRPF40B-202ENST00000380281 ADAM5Q6NVV9 412 aa11.21□□□□□ -0.62
PRPF40B-202ENST00000380281 PRSS35Q8N3Z0 413 aa11.21□□□□□ -0.62
PRPF40B-202ENST00000380281 OR1J4Q8NGS1 313 aa11.21□□□□□ -0.62
PRPF40B-202ENST00000380281 POFUT1Q9H488 388 aa11.21□□□□□ -0.62
PRPF40B-202ENST00000380281 ACKR4Q9NPB9 350 aa11.21□□□□□ -0.62
PRPF40B-202ENST00000380281 RPS10P5Q9NQ39 176 aa11.21□□□□□ -0.62
PRPF40B-202ENST00000380281 TREM2Q9NZC2 230 aa11.21□□□□□ -0.62
PRPF40B-202ENST00000380281 METTL1Q9UBP6 276 aaKnown RBP11.21□□□□□ -0.62
PRPF40B-202ENST00000380281 YBX2Q9Y2T7 364 aaKnown RBP11.21□□□□□ -0.62
PRPF40B-202ENST00000380281 NOP16Q9Y3C1 178 aaKnown RBP11.21□□□□□ -0.62
PRPF40B-202ENST00000380281 FRYQ5TBA9 3013 aa11.21□□□□□ -0.62
PRPF40B-202ENST00000380281 TNFP01375 233 aa11.2□□□□□ -0.62
PRPF40B-202ENST00000380281 HEXAP06865 529 aa11.2□□□□□ -0.62
PRPF40B-202ENST00000380281 CTHP32929 405 aa11.2□□□□□ -0.62
PRPF40B-202ENST00000380281 ATP1B3P54709 279 aa11.2□□□□□ -0.62
PRPF40B-202ENST00000380281 ADAM8P78325 824 aa11.2□□□□□ -0.62
PRPF40B-202ENST00000380281 EGR4Q05215 589 aa11.2□□□□□ -0.62
PRPF40B-202ENST00000380281 VWA2Q5GFL6 755 aa11.2□□□□□ -0.62
PRPF40B-202ENST00000380281 RTN4RL2Q86UN3 420 aa11.2□□□□□ -0.62
PRPF40B-202ENST00000380281 MIB2Q96AX9 1013 aa11.2□□□□□ -0.62
PRPF40B-202ENST00000380281 FAM3DQ96BQ1 224 aa11.2□□□□□ -0.62
PRPF40B-202ENST00000380281 NUDT22Q9BRQ3 303 aa11.2□□□□□ -0.62
PRPF40B-202ENST00000380281 SEC11CQ9BY50 192 aa11.2□□□□□ -0.62
PRPF40B-202ENST00000380281 MRPS33Q9Y291 106 aaKnown RBP11.2□□□□□ -0.62
PRPF40B-202ENST00000380281 PIAS3Q9Y6X2 628 aa11.2□□□□□ -0.62
PRPF40B-202ENST00000380281 PTPRSQ13332 1948 aa11.2□□□□□ -0.62
PRPF40B-202ENST00000380281 SHISA8B8ZZ34 492 aa11.2□□□□□ -0.62
PRPF40B-202ENST00000380281 EEF1E1-BLOC1S5C9J1V9 151 aa11.2□□□□□ -0.62
PRPF40B-202ENST00000380281 FOXS1O43638 330 aa11.2□□□□□ -0.62
PRPF40B-202ENST00000380281 PRSS3P35030 304 aa11.2□□□□□ -0.62
PRPF40B-202ENST00000380281 ZNF74Q16587 644 aa11.2□□□□□ -0.62
PRPF40B-202ENST00000380281 PYY3Q5JQD4 70 aa11.2□□□□□ -0.62
PRPF40B-202ENST00000380281 C10orf91Q5T1B1 145 aa11.2□□□□□ -0.62
PRPF40B-202ENST00000380281 TMEM184AQ6ZMB5 413 aa11.2□□□□□ -0.62
PRPF40B-202ENST00000380281 Q6ZS52 159 aa11.2□□□□□ -0.62
PRPF40B-202ENST00000380281 GALNT16Q8N428 558 aa11.2□□□□□ -0.62
PRPF40B-202ENST00000380281 ARRDC1Q8N5I2 433 aa11.2□□□□□ -0.62
PRPF40B-202ENST00000380281 STOML3Q8TAV4 291 aa11.2□□□□□ -0.62
PRPF40B-202ENST00000380281 SLC2A12Q8TD20 617 aa11.2□□□□□ -0.62
PRPF40B-202ENST00000380281 GPR148Q8TDV2 347 aa11.2□□□□□ -0.62
PRPF40B-202ENST00000380281 INTS14Q96SY0 518 aa11.2□□□□□ -0.62
PRPF40B-202ENST00000380281 PIGQQ9BRB3 760 aa11.2□□□□□ -0.62
PRPF40B-202ENST00000380281 MMP25Q9NPA2 562 aa11.2□□□□□ -0.62
PRPF40B-202ENST00000380281 TAS2R4Q9NYW5 299 aa11.2□□□□□ -0.62
PRPF40B-202ENST00000380281 PRR13Q9NZ81 148 aa11.2□□□□□ -0.62
PRPF40B-202ENST00000380281 ICAM5Q9UMF0 924 aa11.2□□□□□ -0.62
PRPF40B-202ENST00000380281 TNFSF18Q9UNG2 199 aa11.2□□□□□ -0.62
PRPF40B-202ENST00000380281 C13orf42A0A1B0GVH6 325 aa11.2□□□□□ -0.62
PRPF40B-202ENST00000380281 PRR19A6NJB7 356 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms