RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 FAM25AB3EWG3 89 aa15.28■□□□□ 0.04
THUMPD2-201ENST00000378727 FAM25CB3EWG5 89 aa15.28■□□□□ 0.04
THUMPD2-201ENST00000378727 FAM25GB3EWG6 89 aa15.28■□□□□ 0.04
THUMPD2-201ENST00000378727 P2RY10O00398 339 aa15.28■□□□□ 0.04
THUMPD2-201ENST00000378727 GFRA3O60609 400 aa15.28■□□□□ 0.04
THUMPD2-201ENST00000378727 MAS1P04201 325 aa15.28■□□□□ 0.04
THUMPD2-201ENST00000378727 HSD11B1P28845 292 aa15.28■□□□□ 0.04
THUMPD2-201ENST00000378727 PRKXP51817 358 aa15.28■□□□□ 0.04
THUMPD2-201ENST00000378727 TAF13Q15543 124 aa15.28■□□□□ 0.04
THUMPD2-201ENST00000378727 RIPPLY2Q5TAB7 128 aa15.28■□□□□ 0.04
THUMPD2-201ENST00000378727 METAP1DQ6UB28 335 aaPredicted RBP15.28■□□□□ 0.04
THUMPD2-201ENST00000378727 TUSC5Q8IXB3 177 aa15.28■□□□□ 0.04
THUMPD2-201ENST00000378727 OR8H2Q8N162 312 aa15.28■□□□□ 0.04
THUMPD2-201ENST00000378727 DNAAF1Q8NEP3 725 aa15.28■□□□□ 0.04
THUMPD2-201ENST00000378727 NIPAL2Q9H841 368 aa15.28■□□□□ 0.04
THUMPD2-201ENST00000378727 TMEM38BQ9NVV0 291 aa15.28■□□□□ 0.04
THUMPD2-201ENST00000378727 NOSIPQ9Y314 301 aaKnown RBP15.28■□□□□ 0.04
THUMPD2-201ENST00000378727 ACSM4P0C7M7 580 aa15.27■□□□□ 0.03
THUMPD2-201ENST00000378727 UBCP0CG48 685 aaKnown RBP15.27■□□□□ 0.03
THUMPD2-201ENST00000378727 CPN1P15169 458 aa15.27■□□□□ 0.03
THUMPD2-201ENST00000378727 NPR2P20594 1047 aa15.27■□□□□ 0.03
THUMPD2-201ENST00000378727 TRIM16LQ309B1 348 aa15.27■□□□□ 0.03
THUMPD2-201ENST00000378727 CCDC92Q53HC0 331 aaPredicted RBP15.27■□□□□ 0.03
THUMPD2-201ENST00000378727 GDPD1Q8N9F7 314 aa15.27■□□□□ 0.03
THUMPD2-201ENST00000378727 GJC3Q8NFK1 279 aa15.27■□□□□ 0.03
THUMPD2-201ENST00000378727 GPR35Q9HC97 309 aa15.27■□□□□ 0.03
THUMPD2-201ENST00000378727 EXTL2Q9UBQ6 330 aa15.27■□□□□ 0.03
THUMPD2-201ENST00000378727 NUFIP1Q9UHK0 495 aaKnown RBP15.27■□□□□ 0.03
THUMPD2-201ENST00000378727 URB1O60287 2271 aaKnown RBP15.27■□□□□ 0.03
THUMPD2-201ENST00000378727 FREM1Q5H8C1 2179 aa15.27■□□□□ 0.03
THUMPD2-201ENST00000378727 TFECO14948 347 aaPredicted RBP15.26■□□□□ 0.03
THUMPD2-201ENST00000378727 LMX1BO60663 402 aa15.26■□□□□ 0.03
THUMPD2-201ENST00000378727 WISP2O76076 250 aa15.26■□□□□ 0.03
THUMPD2-201ENST00000378727 SLC2A1P11166 492 aa15.26■□□□□ 0.03
THUMPD2-201ENST00000378727 IL7P13232 177 aa15.26■□□□□ 0.03
THUMPD2-201ENST00000378727 ZNF121P58317 390 aaPredicted RBP15.26■□□□□ 0.03
THUMPD2-201ENST00000378727 CEACAM16Q2WEN9 425 aa15.26■□□□□ 0.03
THUMPD2-201ENST00000378727 PYDC2Q56P42 97 aa15.26■□□□□ 0.03
THUMPD2-201ENST00000378727 TSPO2Q5TGU0 170 aa15.26■□□□□ 0.03
THUMPD2-201ENST00000378727 TMEM244Q5VVB8 128 aa15.26■□□□□ 0.03
THUMPD2-201ENST00000378727 OR4M1Q8NGD0 313 aa15.26■□□□□ 0.03
THUMPD2-201ENST00000378727 LGALS14Q8TCE9 139 aa15.26■□□□□ 0.03
THUMPD2-201ENST00000378727 COX4I2Q96KJ9 171 aa15.26■□□□□ 0.03
THUMPD2-201ENST00000378727 BCO1Q9HAY6 547 aa15.26■□□□□ 0.03
THUMPD2-201ENST00000378727 CLEC4AQ9UMR7 237 aa15.26■□□□□ 0.03
THUMPD2-201ENST00000378727 SLC5A6Q9Y289 635 aa15.26■□□□□ 0.03
THUMPD2-201ENST00000378727 MRPL33O75394 65 aaKnown RBP15.26■□□□□ 0.03
THUMPD2-201ENST00000378727 CSF3P09919 207 aa15.26■□□□□ 0.03
THUMPD2-201ENST00000378727 OCMP0CE72 109 aaPredicted RBP15.26■□□□□ 0.03
THUMPD2-201ENST00000378727 ZNF24P17028 368 aa15.26■□□□□ 0.03
THUMPD2-201ENST00000378727 CTSSP25774 331 aa15.26■□□□□ 0.03
THUMPD2-201ENST00000378727 GRB2P62993 217 aaKnown RBP15.26■□□□□ 0.03
THUMPD2-201ENST00000378727 IL18Q14116 193 aa15.26■□□□□ 0.03
THUMPD2-201ENST00000378727 DTX3Q8N9I9 347 aa15.26■□□□□ 0.03
THUMPD2-201ENST00000378727 POC5Q8NA72 575 aa15.26■□□□□ 0.03
THUMPD2-201ENST00000378727 OR13C3Q8NGS6 347 aa15.26■□□□□ 0.03
THUMPD2-201ENST00000378727 PRRG4Q9BZD6 226 aa15.26■□□□□ 0.03
THUMPD2-201ENST00000378727 EMC3Q9P0I2 261 aa15.26■□□□□ 0.03
THUMPD2-201ENST00000378727 ZNF319Q9P2F9 582 aa15.26■□□□□ 0.03
THUMPD2-201ENST00000378727 SPATA2Q9UM82 520 aa15.26■□□□□ 0.03
THUMPD2-201ENST00000378727 A0A1B0GVC2 190 aa15.25■□□□□ 0.03
THUMPD2-201ENST00000378727 A6NIN4 97 aa15.25■□□□□ 0.03
THUMPD2-201ENST00000378727 IGHV3-9P01782 118 aa15.25■□□□□ 0.03
THUMPD2-201ENST00000378727 IGHG3P01860 377 aa15.25■□□□□ 0.03
THUMPD2-201ENST00000378727 B4GALT1P15291 398 aa15.25■□□□□ 0.03
THUMPD2-201ENST00000378727 IGFBP3P17936 291 aaPredicted RBP15.25■□□□□ 0.03
THUMPD2-201ENST00000378727 PTBP1P26599 531 aaKnown RBP eCLIP15.25■□□□□ 0.03
THUMPD2-201ENST00000378727 CX3CR1P49238 355 aa15.25■□□□□ 0.03
THUMPD2-201ENST00000378727 PSMD7P51665 324 aa15.25■□□□□ 0.03
THUMPD2-201ENST00000378727 CLDN12P56749 244 aa15.25■□□□□ 0.03
THUMPD2-201ENST00000378727 RIN1Q13671 783 aa15.25■□□□□ 0.03
THUMPD2-201ENST00000378727 RSPO1Q2MKA7 263 aaPredicted RBP15.25■□□□□ 0.03
THUMPD2-201ENST00000378727 PRSS45Q7RTY3 260 aa15.25■□□□□ 0.03
THUMPD2-201ENST00000378727 FOXB1Q99853 325 aa15.25■□□□□ 0.03
THUMPD2-201ENST00000378727 SLCO5A1Q9H2Y9 848 aa15.25■□□□□ 0.03
THUMPD2-201ENST00000378727 MOB1AQ9H8S9 216 aa15.25■□□□□ 0.03
THUMPD2-201ENST00000378727 RNF122Q9H9V4 155 aa15.25■□□□□ 0.03
THUMPD2-201ENST00000378727 CALHM2Q9HA72 323 aa15.25■□□□□ 0.03
THUMPD2-201ENST00000378727 TBC1D24Q9ULP9 559 aa15.25■□□□□ 0.03
THUMPD2-201ENST00000378727 RTTNQ86VV8 2226 aa15.25■□□□□ 0.03
THUMPD2-201ENST00000378727 ZNF724A8MTY0 619 aa15.24■□□□□ 0.03
THUMPD2-201ENST00000378727 CD2P06729 351 aa15.24■□□□□ 0.03
THUMPD2-201ENST00000378727 FSTP19883 344 aa15.24■□□□□ 0.03
THUMPD2-201ENST00000378727 GALK2Q01415 458 aa15.24■□□□□ 0.03
THUMPD2-201ENST00000378727 OR8B12Q8NGG6 310 aa15.24■□□□□ 0.03
THUMPD2-201ENST00000378727 ZNF671Q8TAW3 534 aa15.24■□□□□ 0.03
THUMPD2-201ENST00000378727 KCNJ15Q99712 375 aa15.24■□□□□ 0.03
THUMPD2-201ENST00000378727 SCNM1Q9BWG6 230 aa15.24■□□□□ 0.03
THUMPD2-201ENST00000378727 LIN7BQ9HAP6 207 aa15.24■□□□□ 0.03
THUMPD2-201ENST00000378727 SLC7A10Q9NS82 523 aa15.24■□□□□ 0.03
THUMPD2-201ENST00000378727 TAS2R4Q9NYW5 299 aa15.24■□□□□ 0.03
THUMPD2-201ENST00000378727 CAMK2AQ9UQM7 478 aa15.24■□□□□ 0.03
THUMPD2-201ENST00000378727 PCDHGA9Q9Y5G4 932 aaKnown RBP15.24■□□□□ 0.03
THUMPD2-201ENST00000378727 A0A0G2JMP0 313 aa15.24■□□□□ 0.03
THUMPD2-201ENST00000378727 A0A0X1KG70 313 aa15.24■□□□□ 0.03
THUMPD2-201ENST00000378727 A0A1B0GTI1 187 aa15.24■□□□□ 0.03
THUMPD2-201ENST00000378727 A0A1W2PQ09 198 aa15.24■□□□□ 0.03
THUMPD2-201ENST00000378727 ANXA2P2A6NMY6 339 aa15.24■□□□□ 0.03
THUMPD2-201ENST00000378727 APOA1P02647 267 aa15.24■□□□□ 0.03
THUMPD2-201ENST00000378727 ANXA2P07355 339 aaKnown RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms