RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 HSPA12AO43301 675 aa7.23□□□□□ -1.25
CKAP2-203ENST00000378037 IL1AP01583 271 aa7.23□□□□□ -1.25
CKAP2-203ENST00000378037 RRASP10301 218 aa7.23□□□□□ -1.25
CKAP2-203ENST00000378037 GNB3P16520 340 aa7.23□□□□□ -1.25
CKAP2-203ENST00000378037 ZNF121P58317 390 aaPredicted RBP7.23□□□□□ -1.25
CKAP2-203ENST00000378037 SEC61A1P61619 476 aaKnown RBP7.23□□□□□ -1.25
CKAP2-203ENST00000378037 PPIAP62937 165 aaKnown RBP7.23□□□□□ -1.25
CKAP2-203ENST00000378037 SLC9A3R2Q15599 337 aa7.23□□□□□ -1.25
CKAP2-203ENST00000378037 WDR74Q6RFH5 385 aaPredicted RBP7.23□□□□□ -1.25
CKAP2-203ENST00000378037 MFSD4AQ8N468 514 aa7.23□□□□□ -1.25
CKAP2-203ENST00000378037 GVQW1Q8N7I0 195 aa7.23□□□□□ -1.25
CKAP2-203ENST00000378037 OR2Y1Q8NGV0 311 aa7.23□□□□□ -1.25
CKAP2-203ENST00000378037 DYRK2Q92630 601 aa7.23□□□□□ -1.25
CKAP2-203ENST00000378037 DPAGT1Q9H3H5 408 aa7.23□□□□□ -1.25
CKAP2-203ENST00000378037 AKIP1Q9NQ31 210 aa7.23□□□□□ -1.25
CKAP2-203ENST00000378037 NRIP3Q9NQ35 241 aa7.23□□□□□ -1.25
CKAP2-203ENST00000378037 B4GALT7Q9UBV7 327 aa7.23□□□□□ -1.25
CKAP2-203ENST00000378037 GDF2Q9UK05 429 aaPredicted RBP7.23□□□□□ -1.25
CKAP2-203ENST00000378037 FBXO9Q9UK97 447 aaPredicted RBP7.23□□□□□ -1.25
CKAP2-203ENST00000378037 PDCD5O14737 125 aa7.23□□□□□ -1.25
CKAP2-203ENST00000378037 ARPC5O15511 151 aa7.23□□□□□ -1.25
CKAP2-203ENST00000378037 ZNF208O43345 1280 aa7.23□□□□□ -1.25
CKAP2-203ENST00000378037 ABHD16AO95870 558 aa7.23□□□□□ -1.25
CKAP2-203ENST00000378037 CX3CR1P49238 355 aa7.23□□□□□ -1.25
CKAP2-203ENST00000378037 MTCP1P56278 107 aa7.23□□□□□ -1.25
CKAP2-203ENST00000378037 CXADRP78310 365 aa7.23□□□□□ -1.25
CKAP2-203ENST00000378037 ZNF141Q15928 474 aa7.23□□□□□ -1.25
CKAP2-203ENST00000378037 RPL22L1Q6P5R6 122 aaKnown RBP7.23□□□□□ -1.25
CKAP2-203ENST00000378037 OGFOD3Q6PK18 319 aa7.23□□□□□ -1.25
CKAP2-203ENST00000378037 LRRTM1Q86UE6 522 aa7.23□□□□□ -1.25
CKAP2-203ENST00000378037 SLITRK4Q8IW52 837 aa7.23□□□□□ -1.25
CKAP2-203ENST00000378037 OR10D3Q8NH80 312 aa7.23□□□□□ -1.25
CKAP2-203ENST00000378037 NR4A3Q92570 626 aa7.23□□□□□ -1.25
CKAP2-203ENST00000378037 SMIM19Q96E16 107 aa7.23□□□□□ -1.25
CKAP2-203ENST00000378037 TRIB1Q96RU8 372 aa7.23□□□□□ -1.25
CKAP2-203ENST00000378037 TMPRSS13Q9BYE2 586 aa7.23□□□□□ -1.25
CKAP2-203ENST00000378037 MIXL1Q9H2W2 232 aa7.23□□□□□ -1.25
CKAP2-203ENST00000378037 MGAT4CQ9UBM8 478 aa7.23□□□□□ -1.25
CKAP2-203ENST00000378037 ZNF223Q9UK11 482 aaPredicted RBP7.23□□□□□ -1.25
CKAP2-203ENST00000378037 B3GNT3Q9Y2A9 372 aa7.23□□□□□ -1.25
CKAP2-203ENST00000378037 A0A0J9YW62 118 aa7.23□□□□□ -1.25
CKAP2-203ENST00000378037 SLC22A23A1A5C7 686 aa7.23□□□□□ -1.25
CKAP2-203ENST00000378037 NOTOA8MTQ0 251 aa7.23□□□□□ -1.25
CKAP2-203ENST00000378037 PMP2P02689 132 aa7.23□□□□□ -1.25
CKAP2-203ENST00000378037 PIPP12273 146 aaPredicted RBP7.23□□□□□ -1.25
CKAP2-203ENST00000378037 UQCRC1P31930 480 aa7.23□□□□□ -1.25
CKAP2-203ENST00000378037 FABP6P51161 128 aa7.23□□□□□ -1.25
CKAP2-203ENST00000378037 MFSD13AQ14CX5 517 aa7.23□□□□□ -1.25
CKAP2-203ENST00000378037 FCN2Q15485 313 aa7.23□□□□□ -1.25
CKAP2-203ENST00000378037 STAC2Q6ZMT1 411 aa7.23□□□□□ -1.25
CKAP2-203ENST00000378037 IQCF2Q8IXL9 164 aa7.23□□□□□ -1.25
CKAP2-203ENST00000378037 FAM3DQ96BQ1 224 aa7.23□□□□□ -1.25
CKAP2-203ENST00000378037 CYYR1Q96J86 154 aa7.23□□□□□ -1.25
CKAP2-203ENST00000378037 HIST1H2AAQ96QV6 131 aa7.23□□□□□ -1.25
CKAP2-203ENST00000378037 GPHA2Q96T91 129 aa7.23□□□□□ -1.25
CKAP2-203ENST00000378037 DPCDQ9BVM2 203 aaPredicted RBP7.23□□□□□ -1.25
CKAP2-203ENST00000378037 TXNIPQ9H3M7 391 aa7.23□□□□□ -1.25
CKAP2-203ENST00000378037 PIGLQ9Y2B2 252 aa7.23□□□□□ -1.25
CKAP2-203ENST00000378037 ALG5Q9Y673 324 aa7.23□□□□□ -1.25
CKAP2-203ENST00000378037 NAV2Q8IVL1 2488 aa7.23□□□□□ -1.25
CKAP2-203ENST00000378037 RELNP78509 3460 aa7.23□□□□□ -1.25
CKAP2-203ENST00000378037 TRDV1A0A1B0GX56 115 aa7.22□□□□□ -1.25
CKAP2-203ENST00000378037 BLACEA4D250 179 aa7.22□□□□□ -1.25
CKAP2-203ENST00000378037 HTR3EA5X5Y0 456 aa7.22□□□□□ -1.25
CKAP2-203ENST00000378037 ZNF850A8MQ14 1090 aa7.22□□□□□ -1.25
CKAP2-203ENST00000378037 RAB27BO00194 218 aa7.22□□□□□ -1.25
CKAP2-203ENST00000378037 KCNAB3O43448 404 aa7.22□□□□□ -1.25
CKAP2-203ENST00000378037 GRPP07492 148 aa7.22□□□□□ -1.25
CKAP2-203ENST00000378037 KIR2DL3P43628 341 aa7.22□□□□□ -1.25
CKAP2-203ENST00000378037 SF3B4Q15427 424 aaKnown RBP eCLIP7.22□□□□□ -1.253e-7■■□□□ 14.4
CKAP2-203ENST00000378037 TIGD3Q6B0B8 471 aa7.22□□□□□ -1.25
CKAP2-203ENST00000378037 MOB3CQ70IA8 216 aa7.22□□□□□ -1.25
CKAP2-203ENST00000378037 SLC16A9Q7RTY1 509 aa7.22□□□□□ -1.25
CKAP2-203ENST00000378037 NR2C2APQ86WQ0 139 aa7.22□□□□□ -1.25
CKAP2-203ENST00000378037 ZNF584Q8IVC4 421 aa7.22□□□□□ -1.25
CKAP2-203ENST00000378037 PNLDC1Q8NA58 520 aaKnown RBP7.22□□□□□ -1.25
CKAP2-203ENST00000378037 DEFB108BQ8NET1 73 aa7.22□□□□□ -1.25
CKAP2-203ENST00000378037 OR51S1Q8NGJ8 323 aa7.22□□□□□ -1.25
CKAP2-203ENST00000378037 FBXW5Q969U6 566 aa7.22□□□□□ -1.25
CKAP2-203ENST00000378037 SIGLEC12Q96PQ1 595 aa7.22□□□□□ -1.25
CKAP2-203ENST00000378037 FBXO4Q9UKT5 387 aa7.22□□□□□ -1.25
CKAP2-203ENST00000378037 BAIAP2Q9UQB8 552 aa7.22□□□□□ -1.25
CKAP2-203ENST00000378037 PLPP3O14495 311 aa7.22□□□□□ -1.25
CKAP2-203ENST00000378037 BET1O15155 118 aa7.22□□□□□ -1.25
CKAP2-203ENST00000378037 AKR7A2O43488 359 aa7.22□□□□□ -1.25
CKAP2-203ENST00000378037 CNOT4O95628 575 aaKnown RBP7.22□□□□□ -1.25
CKAP2-203ENST00000378037 IGKV3-11P04433 115 aa7.22□□□□□ -1.25
CKAP2-203ENST00000378037 PRSS3P35030 304 aa7.22□□□□□ -1.25
CKAP2-203ENST00000378037 CD96P40200 585 aa7.22□□□□□ -1.25
CKAP2-203ENST00000378037 TPBGQ13641 420 aa7.22□□□□□ -1.25
CKAP2-203ENST00000378037 GPR176Q14439 515 aa7.22□□□□□ -1.25
CKAP2-203ENST00000378037 KCNJ8Q15842 424 aa7.22□□□□□ -1.25
CKAP2-203ENST00000378037 GPR139Q6DWJ6 353 aa7.22□□□□□ -1.25
CKAP2-203ENST00000378037 OR52N4Q8NGI2 321 aa7.22□□□□□ -1.25
CKAP2-203ENST00000378037 OR52N1Q8NH53 320 aa7.22□□□□□ -1.25
CKAP2-203ENST00000378037 MCHR2Q969V1 340 aa7.22□□□□□ -1.25
CKAP2-203ENST00000378037 ATF6BQ99941 703 aa7.22□□□□□ -1.25
CKAP2-203ENST00000378037 SARGQ9BW04 601 aa7.22□□□□□ -1.25
CKAP2-203ENST00000378037 FAM234AQ9H0X4 552 aa7.22□□□□□ -1.25
CKAP2-203ENST00000378037 RABL2AQ9UBK7 228 aaPredicted RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms