RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 CHD3Q12873 2000 aaKnown RBP9.86□□□□□ -0.83
SMARCE1-203ENST00000377808 NAV3Q8IVL0 2385 aa9.86□□□□□ -0.83
SMARCE1-203ENST00000377808 ZSCAN5BA6NJL1 495 aa9.85□□□□□ -0.83
SMARCE1-203ENST00000377808 AQP12BA6NM10 295 aa9.85□□□□□ -0.83
SMARCE1-203ENST00000377808 F5H5K5 113 aa9.85□□□□□ -0.83
SMARCE1-203ENST00000377808 H3BSA7 217 aa9.85□□□□□ -0.83
SMARCE1-203ENST00000377808 BHLHE40O14503 412 aa9.85□□□□□ -0.83
SMARCE1-203ENST00000377808 DNAJC8O75937 253 aaPredicted RBP9.85□□□□□ -0.83
SMARCE1-203ENST00000377808 IFNGP01579 166 aa9.85□□□□□ -0.83
SMARCE1-203ENST00000377808 TFP02787 698 aa9.85□□□□□ -0.83
SMARCE1-203ENST00000377808 IGFBP5P24593 272 aa9.85□□□□□ -0.83
SMARCE1-203ENST00000377808 POU1F1P28069 291 aa9.85□□□□□ -0.83
SMARCE1-203ENST00000377808 LIPAP38571 399 aa9.85□□□□□ -0.83
SMARCE1-203ENST00000377808 MMP15P51511 669 aa9.85□□□□□ -0.83
SMARCE1-203ENST00000377808 TMEM33P57088 247 aa9.85□□□□□ -0.83
SMARCE1-203ENST00000377808 MRPS11P82912 194 aaKnown RBP9.85□□□□□ -0.83
SMARCE1-203ENST00000377808 MVKQ03426 396 aa9.85□□□□□ -0.83
SMARCE1-203ENST00000377808 PSG7Q13046 419 aa9.85□□□□□ -0.83
SMARCE1-203ENST00000377808 KCNMB1Q16558 191 aa9.85□□□□□ -0.83
SMARCE1-203ENST00000377808 HFEQ30201 348 aa9.85□□□□□ -0.83
SMARCE1-203ENST00000377808 CFAP77Q6ZQR2 320 aa9.85□□□□□ -0.83
SMARCE1-203ENST00000377808 ZBTB46Q86UZ6 589 aa9.85□□□□□ -0.83
SMARCE1-203ENST00000377808 HIPK1Q86Z02 1210 aa9.85□□□□□ -0.83
SMARCE1-203ENST00000377808 AQP12AQ8IXF9 295 aa9.85□□□□□ -0.83
SMARCE1-203ENST00000377808 LINC01356Q8N9X3 169 aa9.85□□□□□ -0.83
SMARCE1-203ENST00000377808 SLC37A3Q8NCC5 494 aa9.85□□□□□ -0.83
SMARCE1-203ENST00000377808 SLC26A10Q8NG04 563 aa9.85□□□□□ -0.83
SMARCE1-203ENST00000377808 OR2Z1Q8NG97 314 aa9.85□□□□□ -0.83
SMARCE1-203ENST00000377808 OR6K6Q8NGW6 343 aa9.85□□□□□ -0.83
SMARCE1-203ENST00000377808 OR2T4Q8NH00 348 aa9.85□□□□□ -0.83
SMARCE1-203ENST00000377808 OR4Q3Q8NH05 313 aa9.85□□□□□ -0.83
SMARCE1-203ENST00000377808 CLDND2Q8NHS1 167 aa9.85□□□□□ -0.83
SMARCE1-203ENST00000377808 GIPC3Q8TF64 312 aa9.85□□□□□ -0.83
SMARCE1-203ENST00000377808 CCL17Q92583 94 aa9.85□□□□□ -0.83
SMARCE1-203ENST00000377808 ELMOD3Q96FG2 381 aa9.85□□□□□ -0.83
SMARCE1-203ENST00000377808 COQ7Q99807 217 aa9.85□□□□□ -0.83
SMARCE1-203ENST00000377808 NIPSNAP1Q9BPW8 284 aa9.85□□□□□ -0.83
SMARCE1-203ENST00000377808 DGCR6LQ9BY27 220 aa9.85□□□□□ -0.83
SMARCE1-203ENST00000377808 YY1AP1Q9H869 796 aa9.85□□□□□ -0.83
SMARCE1-203ENST00000377808 NKIRAS2Q9NYR9 191 aa9.85□□□□□ -0.83
SMARCE1-203ENST00000377808 IL20Q9NYY1 176 aa9.85□□□□□ -0.83
SMARCE1-203ENST00000377808 PDP1Q9P0J1 537 aaPredicted RBP9.85□□□□□ -0.83
SMARCE1-203ENST00000377808 CGGBP1Q9UFW8 167 aaPredicted RBP9.85□□□□□ -0.83
SMARCE1-203ENST00000377808 KLHL21Q9UJP4 597 aa9.85□□□□□ -0.83
SMARCE1-203ENST00000377808 PURGQ9UJV8 347 aaKnown RBP9.85□□□□□ -0.83
SMARCE1-203ENST00000377808 CACNG2Q9Y698 323 aa9.85□□□□□ -0.83
SMARCE1-203ENST00000377808 CUBNO60494 3623 aa9.85□□□□□ -0.83
SMARCE1-203ENST00000377808 SONP18583 2426 aaKnown RBP9.85□□□□□ -0.83
SMARCE1-203ENST00000377808 ISPDA4D126 451 aa9.84□□□□□ -0.83
SMARCE1-203ENST00000377808 RIIAD1A6NNX1 92 aa9.84□□□□□ -0.83
SMARCE1-203ENST00000377808 CLDN25C9JDP6 229 aa9.84□□□□□ -0.83
SMARCE1-203ENST00000377808 ICMTO60725 284 aa9.84□□□□□ -0.83
SMARCE1-203ENST00000377808 RP2O75695 350 aa9.84□□□□□ -0.83
SMARCE1-203ENST00000377808 IFNA2P01563 188 aa9.84□□□□□ -0.83
SMARCE1-203ENST00000377808 GYPBP06028 91 aa9.84□□□□□ -0.83
SMARCE1-203ENST00000377808 SPARCP09486 303 aa9.84□□□□□ -0.83
SMARCE1-203ENST00000377808 ZNF3P17036 446 aa9.84□□□□□ -0.83
SMARCE1-203ENST00000377808 HNF1AP20823 631 aa9.84□□□□□ -0.83
SMARCE1-203ENST00000377808 TNFSF4P23510 183 aa9.84□□□□□ -0.83
SMARCE1-203ENST00000377808 RPS27P42677 84 aaKnown RBP9.84□□□□□ -0.83
SMARCE1-203ENST00000377808 RGS6P49758 472 aa9.84□□□□□ -0.83
SMARCE1-203ENST00000377808 TNFAIP6P98066 277 aaPredicted RBP9.84□□□□□ -0.83
SMARCE1-203ENST00000377808 COX10Q12887 443 aa9.84□□□□□ -0.83
SMARCE1-203ENST00000377808 CRMP1Q14194 572 aa9.84□□□□□ -0.83
SMARCE1-203ENST00000377808 HLXQ14774 488 aaPredicted RBP9.84□□□□□ -0.83
SMARCE1-203ENST00000377808 FAM209AQ5JX71 171 aa9.84□□□□□ -0.83
SMARCE1-203ENST00000377808 SLC18B1Q6NT16 456 aa9.84□□□□□ -0.83
SMARCE1-203ENST00000377808 LYPD4Q6UWN0 246 aa9.84□□□□□ -0.83
SMARCE1-203ENST00000377808 IQCF1Q8N6M8 205 aa9.84□□□□□ -0.83
SMARCE1-203ENST00000377808 OR5L1Q8NGL2 311 aa9.84□□□□□ -0.83
SMARCE1-203ENST00000377808 HPS1Q92902 700 aa9.84□□□□□ -0.83
SMARCE1-203ENST00000377808 SLC7A6OSQ96CW6 309 aaPredicted RBP9.84□□□□□ -0.83
SMARCE1-203ENST00000377808 TIMD4Q96H15 378 aa9.84□□□□□ -0.83
SMARCE1-203ENST00000377808 DCLRE1CQ96SD1 692 aaKnown RBP9.84□□□□□ -0.83
SMARCE1-203ENST00000377808 FEVQ99581 238 aa9.84□□□□□ -0.83
SMARCE1-203ENST00000377808 ATF6BQ99941 703 aa9.84□□□□□ -0.83
SMARCE1-203ENST00000377808 WDR76Q9H967 626 aa9.84□□□□□ -0.83
SMARCE1-203ENST00000377808 ZNF556Q9HAH1 456 aa9.84□□□□□ -0.83
SMARCE1-203ENST00000377808 LPAR3Q9UBY5 353 aa9.84□□□□□ -0.83
SMARCE1-203ENST00000377808 ATPIF1Q9UII2 106 aa9.84□□□□□ -0.83
SMARCE1-203ENST00000377808 ZDHHC8Q9ULC8 765 aa9.84□□□□□ -0.83
SMARCE1-203ENST00000377808 BAIAP2Q9UQB8 552 aa9.84□□□□□ -0.83
SMARCE1-203ENST00000377808 WNT9BO14905 357 aa9.83□□□□□ -0.84
SMARCE1-203ENST00000377808 TUBG1P23258 451 aa9.83□□□□□ -0.84
SMARCE1-203ENST00000377808 CRYBB2P43320 205 aa9.83□□□□□ -0.84
SMARCE1-203ENST00000377808 SLC6A9P48067 706 aa9.83□□□□□ -0.84
SMARCE1-203ENST00000377808 CDH15P55291 814 aa9.83□□□□□ -0.84
SMARCE1-203ENST00000377808 CBX1P83916 185 aa9.83□□□□□ -0.84
SMARCE1-203ENST00000377808 CR1LQ2VPA4 569 aa9.83□□□□□ -0.84
SMARCE1-203ENST00000377808 FAM120AOSQ5T036 256 aa9.83□□□□□ -0.84
SMARCE1-203ENST00000377808 OR2T2Q6IF00 324 aa9.83□□□□□ -0.84
SMARCE1-203ENST00000377808 TMEM179BQ7Z7N9 219 aa9.83□□□□□ -0.84
SMARCE1-203ENST00000377808 HS3ST5Q8IZT8 346 aa9.83□□□□□ -0.84
SMARCE1-203ENST00000377808 LNX2Q8N448 690 aa9.83□□□□□ -0.84
SMARCE1-203ENST00000377808 ATG16L2Q8NAA4 619 aa9.83□□□□□ -0.84
SMARCE1-203ENST00000377808 BHLHE23Q8NDY6 225 aa9.83□□□□□ -0.84
SMARCE1-203ENST00000377808 PTP4A1Q93096 173 aa9.83□□□□□ -0.84
SMARCE1-203ENST00000377808 APOBEC3DQ96AK3 386 aaPredicted RBP9.83□□□□□ -0.84
SMARCE1-203ENST00000377808 DIRC2Q96SL1 478 aa9.83□□□□□ -0.84
SMARCE1-203ENST00000377808 COPS4Q9BT78 406 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms