RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 WIPI2Q9Y4P8 454 aa11.15□□□□□ -0.62
CLCN6-205ENST00000376492 ORC6Q9Y5N6 252 aa11.15□□□□□ -0.62
CLCN6-205ENST00000376492 IGKV1D-43A0A0B4J1Z2 117 aa11.14□□□□□ -0.63
CLCN6-205ENST00000376492 IGHV1-69-2A0A0G2JMI3 117 aa11.14□□□□□ -0.63
CLCN6-205ENST00000376492 OR10H3O60404 316 aa11.14□□□□□ -0.63
CLCN6-205ENST00000376492 CCNB2O95067 398 aa11.14□□□□□ -0.63
CLCN6-205ENST00000376492 UBL3O95164 117 aa11.14□□□□□ -0.63
CLCN6-205ENST00000376492 FARS2O95363 451 aaKnown RBP11.14□□□□□ -0.63
CLCN6-205ENST00000376492 GSTM3P21266 225 aa11.14□□□□□ -0.63
CLCN6-205ENST00000376492 FPR3P25089 353 aa11.14□□□□□ -0.63
CLCN6-205ENST00000376492 RAD52P43351 418 aa11.14□□□□□ -0.63
CLCN6-205ENST00000376492 GSSP48637 474 aa11.14□□□□□ -0.63
CLCN6-205ENST00000376492 FXYD6P3P58550 94 aa11.14□□□□□ -0.63
CLCN6-205ENST00000376492 MRPS34P82930 218 aaKnown RBP11.14□□□□□ -0.63
CLCN6-205ENST00000376492 GLO1Q04760 184 aa11.14□□□□□ -0.63
CLCN6-205ENST00000376492 FOXL1Q12952 345 aa11.14□□□□□ -0.63
CLCN6-205ENST00000376492 HNRNPA0Q13151 305 aaKnown RBP11.14□□□□□ -0.63
CLCN6-205ENST00000376492 LPCAT4Q643R3 524 aa11.14□□□□□ -0.63
CLCN6-205ENST00000376492 GPR139Q6DWJ6 353 aa11.14□□□□□ -0.63
CLCN6-205ENST00000376492 ZNF770Q6IQ21 691 aaPredicted RBP11.14□□□□□ -0.63
CLCN6-205ENST00000376492 TMEM154Q6P9G4 183 aa11.14□□□□□ -0.63
CLCN6-205ENST00000376492 DPY19L2P2Q6ZN68 376 aa11.14□□□□□ -0.63
CLCN6-205ENST00000376492 USP51Q70EK9 711 aa11.14□□□□□ -0.63
CLCN6-205ENST00000376492 GNPDA2Q8TDQ7 276 aa11.14□□□□□ -0.63
CLCN6-205ENST00000376492 TAF15Q92804 592 aaKnown RBP eCLIP11.14□□□□□ -0.63
CLCN6-205ENST00000376492 ZNF556Q9HAH1 456 aa11.14□□□□□ -0.63
CLCN6-205ENST00000376492 SIAEQ9HAT2 523 aa11.14□□□□□ -0.63
CLCN6-205ENST00000376492 SMPD3Q9NY59 655 aaPredicted RBP11.14□□□□□ -0.63
CLCN6-205ENST00000376492 FBXL3Q9UKT7 428 aa11.14□□□□□ -0.63
CLCN6-205ENST00000376492 ADAM18Q9Y3Q7 739 aa11.14□□□□□ -0.63
CLCN6-205ENST00000376492 UGT2A1Q9Y4X1 527 aa11.14□□□□□ -0.63
CLCN6-205ENST00000376492 IGLV3-9A0A075B6K5 115 aa11.13□□□□□ -0.63
CLCN6-205ENST00000376492 DNAJC9-AS1A6NH13 148 aa11.13□□□□□ -0.63
CLCN6-205ENST00000376492 CLDN25C9JDP6 229 aa11.13□□□□□ -0.63
CLCN6-205ENST00000376492 DENRO43583 198 aaKnown RBP11.13□□□□□ -0.63
CLCN6-205ENST00000376492 SLC2A10O95528 541 aa11.13□□□□□ -0.63
CLCN6-205ENST00000376492 TXNDC12O95881 172 aa11.13□□□□□ -0.63
CLCN6-205ENST00000376492 SERPINA5P05154 406 aa11.13□□□□□ -0.63
CLCN6-205ENST00000376492 CRYBB2P43320 205 aa11.13□□□□□ -0.63
CLCN6-205ENST00000376492 KLF3P57682 345 aaPredicted RBP11.13□□□□□ -0.63
CLCN6-205ENST00000376492 LCN2P80188 198 aa11.13□□□□□ -0.63
CLCN6-205ENST00000376492 FMODQ06828 376 aa11.13□□□□□ -0.63
CLCN6-205ENST00000376492 CD47Q08722 323 aa11.13□□□□□ -0.63
CLCN6-205ENST00000376492 TSPAN31Q12999 210 aa11.13□□□□□ -0.63
CLCN6-205ENST00000376492 IL18R1Q13478 541 aa11.13□□□□□ -0.63
CLCN6-205ENST00000376492 TSTQ16762 297 aaKnown RBP11.13□□□□□ -0.63
CLCN6-205ENST00000376492 TTC23Q5W5X9 447 aa11.13□□□□□ -0.63
CLCN6-205ENST00000376492 PGBD2Q6P3X8 592 aa11.13□□□□□ -0.63
CLCN6-205ENST00000376492 SMARCD3Q6STE5 483 aa11.13□□□□□ -0.63
CLCN6-205ENST00000376492 CLDN22Q8N7P3 220 aa11.13□□□□□ -0.63
CLCN6-205ENST00000376492 SLC30A7Q8NEW0 376 aa11.13□□□□□ -0.63
CLCN6-205ENST00000376492 SNX33Q8WV41 574 aa11.13□□□□□ -0.63
CLCN6-205ENST00000376492 Q96M85 177 aa11.13□□□□□ -0.63
CLCN6-205ENST00000376492 C1orf147Q96MC9 270 aaPredicted RBP11.13□□□□□ -0.63
CLCN6-205ENST00000376492 SLC29A1Q99808 456 aa11.13□□□□□ -0.63
CLCN6-205ENST00000376492 SH3GL3Q99963 347 aa11.13□□□□□ -0.63
CLCN6-205ENST00000376492 UNKLQ9H9P5 680 aaKnown RBP11.13□□□□□ -0.63
CLCN6-205ENST00000376492 PDP1Q9P0J1 537 aaPredicted RBP11.13□□□□□ -0.63
CLCN6-205ENST00000376492 SLC22A23A1A5C7 686 aa11.12□□□□□ -0.63
CLCN6-205ENST00000376492 PRSS37A4D1T9 235 aa11.12□□□□□ -0.63
CLCN6-205ENST00000376492 SOCS2O14508 198 aa11.12□□□□□ -0.63
CLCN6-205ENST00000376492 XKRYO14609 159 aa11.12□□□□□ -0.63
CLCN6-205ENST00000376492 EI24O14681 340 aa11.12□□□□□ -0.63
CLCN6-205ENST00000376492 IMPA2O14732 288 aa11.12□□□□□ -0.63
CLCN6-205ENST00000376492 SLC16A6O15403 523 aa11.12□□□□□ -0.63
CLCN6-205ENST00000376492 LCKP06239 509 aa11.12□□□□□ -0.63
CLCN6-205ENST00000376492 ZNF250P15622 560 aa11.12□□□□□ -0.63
CLCN6-205ENST00000376492 FPR2P25090 351 aa11.12□□□□□ -0.63
CLCN6-205ENST00000376492 ZFP36P26651 326 aaKnown RBP11.12□□□□□ -0.63
CLCN6-205ENST00000376492 SDHAP31040 664 aa11.12□□□□□ -0.63
CLCN6-205ENST00000376492 CDAP32320 146 aa11.12□□□□□ -0.63
CLCN6-205ENST00000376492 ESRRGP62508 458 aa11.12□□□□□ -0.63
CLCN6-205ENST00000376492 PCGF3Q3KNV8 242 aa11.12□□□□□ -0.63
CLCN6-205ENST00000376492 SLC36A2Q495M3 483 aa11.12□□□□□ -0.63
CLCN6-205ENST00000376492 MESTQ5EB52 335 aa11.12□□□□□ -0.63
CLCN6-205ENST00000376492 FAM27BQ5VT28 67 aa11.12□□□□□ -0.63
CLCN6-205ENST00000376492 IZUMO2Q6UXV1 221 aa11.12□□□□□ -0.63
CLCN6-205ENST00000376492 FOXL2NBQ6ZUU3 175 aa11.12□□□□□ -0.63
CLCN6-205ENST00000376492 SLC16A14Q7RTX9 510 aa11.12□□□□□ -0.63
CLCN6-205ENST00000376492 OR10G2Q8NGC3 310 aa11.12□□□□□ -0.63
CLCN6-205ENST00000376492 SYNPRQ8TBG9 265 aa11.12□□□□□ -0.63
CLCN6-205ENST00000376492 NSMAFQ92636 917 aa11.12□□□□□ -0.63
CLCN6-205ENST00000376492 TFAP2CQ92754 450 aa11.12□□□□□ -0.63
CLCN6-205ENST00000376492 NABP1Q96AH0 204 aa11.12□□□□□ -0.63
CLCN6-205ENST00000376492 ZNF570Q96NI8 536 aa11.12□□□□□ -0.63
CLCN6-205ENST00000376492 GAL3ST1Q99999 423 aa11.12□□□□□ -0.63
CLCN6-205ENST00000376492 IL20RAQ9UHF4 553 aa11.12□□□□□ -0.63
CLCN6-205ENST00000376492 IER3IP1Q9Y5U9 82 aa11.12□□□□□ -0.63
CLCN6-205ENST00000376492 HSPE1-MOB4S4R3N1 261 aa11.12□□□□□ -0.63
CLCN6-205ENST00000376492 VWFP04275 2813 aa11.11□□□□□ -0.63
CLCN6-205ENST00000376492 TEX13CA0A0J9YWL9 993 aa11.11□□□□□ -0.63
CLCN6-205ENST00000376492 SAC3D1A6NKF1 404 aa11.11□□□□□ -0.63
CLCN6-205ENST00000376492 E9PQ18 207 aa11.11□□□□□ -0.63
CLCN6-205ENST00000376492 ARPC3O15145 178 aa11.11□□□□□ -0.63
CLCN6-205ENST00000376492 TPD52L2O43399 206 aaKnown RBP11.11□□□□□ -0.63
CLCN6-205ENST00000376492 GASTP01350 101 aa11.11□□□□□ -0.63
CLCN6-205ENST00000376492 MMP7P09237 267 aaPredicted RBP11.11□□□□□ -0.63
CLCN6-205ENST00000376492 PRTN3P24158 256 aa11.11□□□□□ -0.63
CLCN6-205ENST00000376492 SLC6A6P31641 620 aa11.11□□□□□ -0.63
CLCN6-205ENST00000376492 RBMXP38159 391 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms