RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 KCNG3Q8TAE7 436 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 ELSPBP1Q96BH3 223 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 MARVELD1Q9BSK0 173 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 ZNF286AQ9HBT8 521 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 NECAP2Q9NVZ3 263 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 A0A1W2PPV9 198 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 SSSCA1O60232 199 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 IGHV3-9P01782 118 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 SFTA3P0C7M3 94 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 EFNA3P52797 238 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 PDZK1IP1Q13113 114 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 PHOSPHO2Q8TCD6 241 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 LAT2Q9GZY6 243 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 PURGQ9UJV8 347 aaKnown RBP5.92□□□□□ -1.46
SMC1A-202ENST00000375340 STMND1H3BQB6 276 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 ZNF250P15622 560 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 TBXA2RP21731 343 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 AVPR2P30518 371 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 AFF3P51826 1226 aaKnown RBP5.92□□□□□ -1.46
SMC1A-202ENST00000375340 ZNF74Q16587 644 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 CLPPQ16740 277 aaPredicted RBP5.92□□□□□ -1.46
SMC1A-202ENST00000375340 LTC4SQ16873 150 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 LGALSLQ3ZCW2 172 aaPredicted RBP5.92□□□□□ -1.46
SMC1A-202ENST00000375340 PRSS42Q7Z5A4 293 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 TRAF4Q9BUZ4 470 aaPredicted RBP5.92□□□□□ -1.46
SMC1A-202ENST00000375340 OR14J1Q9UGF5 321 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 ZNF175Q9Y473 711 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 SEC16AO15027 2179 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 APLNRP35414 380 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 ZNF117Q03924 483 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 PGAP1Q75T13 922 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 CMTM1Q8IZ96 169 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 PPP1R1CQ8WVI7 109 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 TMPRSS13Q9BYE2 586 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 ULBP2Q9BZM5 246 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 DOCK4Q8N1I0 1966 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 CD300LBA8K4G0 201 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 TNFSF11O14788 317 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 ZFPL1O95159 310 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 EML2O95834 649 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 OLFM2O95897 454 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 SLC6A1P30531 599 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 MECP2P51608 486 aaKnown RBP5.92□□□□□ -1.46
SMC1A-202ENST00000375340 MRPS34P82930 218 aaKnown RBP5.92□□□□□ -1.46
SMC1A-202ENST00000375340 ZIC1Q15915 447 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 CLLU1Q5K131 121 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 OR4D10Q8NGI6 311 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 ZNF845Q96IR2 970 aaPredicted RBP5.92□□□□□ -1.46
SMC1A-202ENST00000375340 PBX4Q9BYU1 374 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 TLCD2A6NGC4 264 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 ERVH48-1M5A8F1 160 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 SPRY1O43609 319 aaPredicted RBP5.92□□□□□ -1.46
SMC1A-202ENST00000375340 CTAG2O75638 210 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 RRASP10301 218 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 FXNQ16595 210 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 TMEM91Q6ZNR0 172 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 ZNF321PQ8N8H1 164 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 CPNE4Q96A23 557 aaPredicted RBP5.92□□□□□ -1.46
SMC1A-202ENST00000375340 GAREM1Q9H706 876 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 PRAMEF25A6NGN4 478 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 TMEM200CA6NKL6 621 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 NRG2O14511 850 aaPredicted RBP5.91□□□□□ -1.46
SMC1A-202ENST00000375340 NDUFB6O95139 128 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 ADRA2AP08913 450 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 CTHP32929 405 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 HAGHQ16775 308 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 NAXDQ8IW45 347 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 YIPF5Q969M3 257 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 MRGPRX1Q96LB2 322 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 NUDT9Q9BW91 350 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 SCN5AQ14524 2016 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 SNRPGP15A8MWD9 76 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 MT-ATP6P00846 226 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 THBS2P35442 1172 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 ZXDCQ2QGD7 858 aaPredicted RBP5.91□□□□□ -1.46
SMC1A-202ENST00000375340 ZAR1Q86SH2 424 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 GPR84Q9NQS5 396 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 FLVCR1Q9Y5Y0 555 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 C4orf51C9J302 202 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 IMPA2O14732 288 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 OR2F2O95006 317 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 MESP2Q0VG99 397 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 OR2F1Q13607 317 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 TMEM240Q5SV17 173 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 ACOT7LQ6ZUV0 252 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 PHYHIPQ92561 330 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 MOGAT1Q96PD6 335 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 SLC5A6Q9Y289 635 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 F5P12259 2224 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 ZNF121P58317 390 aaPredicted RBP5.91□□□□□ -1.46
SMC1A-202ENST00000375340 SNTB1Q13884 538 aaKnown RBP5.91□□□□□ -1.46
SMC1A-202ENST00000375340 DUSP18Q8NEJ0 188 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 C19orf43Q9BQ61 176 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 NICN1Q9BSH3 213 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 ENKD1Q9H0I2 346 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 FAM212BQ9NTI7 297 aaPredicted RBP5.91□□□□□ -1.46
SMC1A-202ENST00000375340 OTOL1A6NHN0 477 aaPredicted RBP5.91□□□□□ -1.46
SMC1A-202ENST00000375340 RAB27BO00194 218 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 IGHA1P01876 353 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 SERPINE2P07093 398 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms