RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 P2RX2Q9UBL9 471 aa7.1□□□□□ -1.27
USP48-203ENST00000374732 YARS2Q9Y2Z4 477 aaKnown RBP7.1□□□□□ -1.27
USP48-203ENST00000374732 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.09□□□□□ -1.27
USP48-203ENST00000374732 IGSF23A1L1A6 192 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 CDHR4A6H8M9 788 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 PRORSD1PA6NEY8 169 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 C2CD4BA6NLJ0 364 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 BLOC1S5-TXNDC5H3BN57 136 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 J3QLI3 93 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 FAAHO00519 579 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 SELPP16109 830 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 GPX2P18283 190 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 IL2RGP31785 369 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 RPL34P49207 117 aaKnown RBP7.09□□□□□ -1.27
USP48-203ENST00000374732 CAV2P51636 162 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 AKR1C2P52895 323 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 GAS1P54826 345 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 RELBQ01201 579 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 CPSF6Q16630 551 aaKnown RBP eCLIP7.09□□□□□ -1.277e-8■■■□□ 15.3
USP48-203ENST00000374732 TMEM42Q69YG0 159 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 TXNRD3NBQ6F5E7 133 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 WDR82Q6UXN9 313 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 GRASPQ7Z6J2 395 aaPredicted RBP7.09□□□□□ -1.27
USP48-203ENST00000374732 OR11H4Q8NGC9 324 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 MCFD2Q8NI22 146 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 JOSD2Q8TAC2 188 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 TMEM163Q8TC26 289 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 NEU4Q8WWR8 484 aaPredicted RBP7.09□□□□□ -1.27
USP48-203ENST00000374732 CMBLQ96DG6 245 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 ALPK3Q96L96 1907 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 OR2M2Q96R28 347 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 SSBP4Q9BWG4 385 aaPredicted RBP7.09□□□□□ -1.27
USP48-203ENST00000374732 FUNDC2Q9BWH2 189 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 PECRQ9BY49 303 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 GTSF1LQ9H1H1 148 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 LRP12Q9Y561 859 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 PDCD11Q14690 1871 aaKnown RBP7.09□□□□□ -1.27
USP48-203ENST00000374732 PNMA8CA0A1B0GUJ8 204 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 SMIM35A0A1B0GVV1 85 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 SHISA7A6NL88 538 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 CASKO14936 926 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 SYNGR3O43761 229 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 MMP23AO75900 390 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 SIX6O95475 246 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 CPNE6O95741 557 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 MT-ND4P03905 459 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 UBBP0CG47 229 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 IL7RP16871 459 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 GPD1P21695 349 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 EPHA3P29320 983 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 AGTR2P50052 363 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 LGALS4P56470 323 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 GAGE5Q13069 117 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 GAGE6Q13070 117 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 PCOLCEQ15113 449 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 TEDDM1Q5T9Z0 273 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 SDHAF4Q5VUM1 108 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 CBLN3Q6UW01 205 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 ALKAL1Q6UXT8 129 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 DOLPP1Q86YN1 238 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 WFDC3Q8IUB2 231 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 OR10G9Q8NGN4 311 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 OR51Q1Q8NH59 317 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 LGALS14Q8TCE9 139 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 ZIC5Q96T25 663 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 OR2J1Q9GZK6 312 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 TLNRD1Q9H1K6 362 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 SERHLQ9NQF3 203 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 PRDM6Q9NQX0 595 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 ARL15Q9NXU5 204 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 MYOTQ9UBF9 498 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 SH2B3Q9UQQ2 575 aa7.09□□□□□ -1.27
USP48-203ENST00000374732 GOLGB1Q14789 3259 aaKnown RBP7.09□□□□□ -1.28
USP48-203ENST00000374732 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.09□□□□□ -1.28
USP48-203ENST00000374732 TVP23AA6NH52 213 aa7.09□□□□□ -1.28
USP48-203ENST00000374732 EI24O14681 340 aa7.09□□□□□ -1.28
USP48-203ENST00000374732 LDB2O43679 373 aa7.09□□□□□ -1.28
USP48-203ENST00000374732 ENTPD6O75354 484 aa7.09□□□□□ -1.28
USP48-203ENST00000374732 CLDN7O95471 211 aa7.09□□□□□ -1.28
USP48-203ENST00000374732 IL18BPO95998 194 aa7.09□□□□□ -1.28
USP48-203ENST00000374732 SERPINE1P05121 402 aa7.09□□□□□ -1.28
USP48-203ENST00000374732 MIPP30301 263 aa7.09□□□□□ -1.28
USP48-203ENST00000374732 BTG1P62324 171 aa7.09□□□□□ -1.28
USP48-203ENST00000374732 CDK5Q00535 292 aa7.09□□□□□ -1.28
USP48-203ENST00000374732 SHHQ15465 462 aa7.09□□□□□ -1.28
USP48-203ENST00000374732 PTAR1Q7Z6K3 402 aaPredicted RBP7.09□□□□□ -1.28
USP48-203ENST00000374732 ZNF683Q8IZ20 524 aa7.09□□□□□ -1.28
USP48-203ENST00000374732 PARP16Q8N5Y8 322 aa7.09□□□□□ -1.28
USP48-203ENST00000374732 EID2Q8N6I1 236 aa7.09□□□□□ -1.28
USP48-203ENST00000374732 PNLDC1Q8NA58 520 aaKnown RBP7.09□□□□□ -1.28
USP48-203ENST00000374732 OR10AD1Q8NGE0 317 aa7.09□□□□□ -1.28
USP48-203ENST00000374732 SHKBP1Q8TBC3 707 aa7.09□□□□□ -1.28
USP48-203ENST00000374732 GLYATL1Q969I3 302 aa7.09□□□□□ -1.28
USP48-203ENST00000374732 IGSF8Q969P0 613 aa7.09□□□□□ -1.28
USP48-203ENST00000374732 RTP4Q96DX8 246 aa7.09□□□□□ -1.28
USP48-203ENST00000374732 NODALQ96S42 347 aa7.09□□□□□ -1.28
USP48-203ENST00000374732 SIGMAR1Q99720 223 aa7.09□□□□□ -1.28
USP48-203ENST00000374732 ZNF649Q9BS31 505 aa7.09□□□□□ -1.28
USP48-203ENST00000374732 RIOK2Q9BVS4 552 aaKnown RBP7.09□□□□□ -1.28
USP48-203ENST00000374732 MFSD1Q9H3U5 465 aa7.09□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms