RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 YIF1BQ5BJH7 314 aa4.26□□□□□ -1.73
USP48-202ENST00000374730 ALG10Q5BKT4 473 aa4.26□□□□□ -1.73
USP48-202ENST00000374730 ZNF684Q5T5D7 378 aa4.26□□□□□ -1.73
USP48-202ENST00000374730 FAM27D1Q5T7N8 215 aa4.26□□□□□ -1.73
USP48-202ENST00000374730 GPR139Q6DWJ6 353 aa4.26□□□□□ -1.73
USP48-202ENST00000374730 LEG1Q6P5S2 330 aa4.26□□□□□ -1.73
USP48-202ENST00000374730 SLC16A9Q7RTY1 509 aa4.26□□□□□ -1.73
USP48-202ENST00000374730 PRSS42Q7Z5A4 293 aa4.26□□□□□ -1.73
USP48-202ENST00000374730 KMT5CQ86Y97 462 aa4.26□□□□□ -1.73
USP48-202ENST00000374730 SLC35F3Q8IY50 421 aa4.26□□□□□ -1.73
USP48-202ENST00000374730 ABCA7Q8IZY2 2146 aa4.26□□□□□ -1.73
USP48-202ENST00000374730 PAQR4Q8N4S7 273 aaPredicted RBP4.26□□□□□ -1.73
USP48-202ENST00000374730 RFLNBQ8N5W9 214 aa4.26□□□□□ -1.73
USP48-202ENST00000374730 METTL27Q8N6F8 245 aaPredicted RBP4.26□□□□□ -1.73
USP48-202ENST00000374730 LRRC17Q8N6Y2 441 aa4.26□□□□□ -1.73
USP48-202ENST00000374730 SAMD12Q8N8I0 201 aa4.26□□□□□ -1.73
USP48-202ENST00000374730 ADPRHL1Q8NDY3 354 aa4.26□□□□□ -1.73
USP48-202ENST00000374730 OR4M2Q8NGB6 313 aa4.26□□□□□ -1.73
USP48-202ENST00000374730 MOSPD2Q8NHP6 518 aa4.26□□□□□ -1.73
USP48-202ENST00000374730 ZNF721Q8TF20 911 aa4.26□□□□□ -1.73
USP48-202ENST00000374730 RLN3Q8WXF3 142 aa4.26□□□□□ -1.73
USP48-202ENST00000374730 ADAMTS14Q8WXS8 1223 aa4.26□□□□□ -1.73
USP48-202ENST00000374730 ADIPOR1Q96A54 375 aa4.26□□□□□ -1.73
USP48-202ENST00000374730 RFT1Q96AA3 541 aa4.26□□□□□ -1.73
USP48-202ENST00000374730 RASD2Q96D21 266 aa4.26□□□□□ -1.73
USP48-202ENST00000374730 RNF170Q96K19 258 aa4.26□□□□□ -1.73
USP48-202ENST00000374730 NMNAT3Q96T66 252 aa4.26□□□□□ -1.73
USP48-202ENST00000374730 C7orf50Q9BRJ6 194 aaKnown RBP4.26□□□□□ -1.73
USP48-202ENST00000374730 ABHD14AQ9BUJ0 271 aa4.26□□□□□ -1.73
USP48-202ENST00000374730 NXF5Q9H1B4 397 aaKnown RBP4.26□□□□□ -1.73
USP48-202ENST00000374730 LRRN3Q9H3W5 708 aa4.26□□□□□ -1.73
USP48-202ENST00000374730 MARCH7Q9H992 704 aa4.26□□□□□ -1.73
USP48-202ENST00000374730 FKRPQ9H9S5 495 aa4.26□□□□□ -1.73
USP48-202ENST00000374730 RPRD1BQ9NQG5 326 aaKnown RBP4.26□□□□□ -1.73
USP48-202ENST00000374730 FSCN3Q9NQT6 498 aa4.26□□□□□ -1.73
USP48-202ENST00000374730 NANSQ9NR45 359 aa4.26□□□□□ -1.73
USP48-202ENST00000374730 ACOXLQ9NUZ1 547 aa4.26□□□□□ -1.73
USP48-202ENST00000374730 MALT1Q9UDY8 824 aa4.26□□□□□ -1.73
USP48-202ENST00000374730 HSF4Q9ULV5 492 aa4.26□□□□□ -1.73
USP48-202ENST00000374730 SPATA2Q9UM82 520 aa4.26□□□□□ -1.73
USP48-202ENST00000374730 COPS3Q9UNS2 423 aa4.26□□□□□ -1.73
USP48-202ENST00000374730 ADAM18Q9Y3Q7 739 aa4.26□□□□□ -1.73
USP48-202ENST00000374730 ALG5Q9Y673 324 aa4.26□□□□□ -1.73
USP48-202ENST00000374730 RNF215Q9Y6U7 377 aa4.26□□□□□ -1.73
USP48-202ENST00000374730 MUC3AQ02505 3323 aa4.26□□□□□ -1.73
USP48-202ENST00000374730 TTC28Q96AY4 2481 aa4.26□□□□□ -1.73
USP48-202ENST00000374730 TRAV36DV7A0A075B6V5 113 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 IGHV1OR21-1A0A087WYE8 117 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 TRBV2A0A0J9YWF9 115 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 TEX13CA0A0J9YWL9 993 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 C7orf66A4D0T2 115 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 GAGE10A6NGK3 116 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 PDCD5O14737 125 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 TSPAN4O14817 238 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 PHYHO14832 338 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 GSTZ1O43708 216 aaPredicted RBP4.25□□□□□ -1.73
USP48-202ENST00000374730 NUDT21O43809 227 aaKnown RBP4.25□□□□□ -1.73
USP48-202ENST00000374730 TPPPO94811 219 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 RENP00797 406 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 MT-ATP6P00846 226 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 IGHMP01871 453 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 BGLAPP02818 100 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 TACSTD2P09758 323 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 GSTT2P0CG29 244 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 GSTT2BP0CG30 244 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 PSKH1P11801 424 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 HPGDP15428 266 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 ARSBP15848 533 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 ATF1P18846 271 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 AHCYP23526 432 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 EDNRAP25101 427 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 BTCP35070 178 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 AQP2P41181 271 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 MNDAP41218 407 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 CENPAP49450 140 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 MMP15P51511 669 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 CCR4P51679 360 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 RAG2P55895 527 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 DLX5P56178 289 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 P2RX3P56373 397 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 STARD6P59095 220 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 RRAS2P62070 204 aaPredicted RBP4.25□□□□□ -1.73
USP48-202ENST00000374730 ERVK-25P63136 954 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 RPP30P78346 268 aaKnown RBP4.25□□□□□ -1.73
USP48-202ENST00000374730 PITPNAQ00169 270 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 ZNF117Q03924 483 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 EGR4Q05215 589 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 LTBQ06643 244 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 RPL18Q07020 188 aaKnown RBP4.25□□□□□ -1.73
USP48-202ENST00000374730 GPR176Q14439 515 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 CDK10Q15131 360 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 DEFB133Q30KQ1 61 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 SLC25A35Q3KQZ1 300 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 GXYLT1Q4G148 440 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 MESTQ5EB52 335 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 UBE2NLQ5JXB2 153 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 ASPHD1Q5U4P2 390 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 EEF1A1P5Q5VTE0 462 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 ZNF57Q68EA5 555 aaPredicted RBP4.25□□□□□ -1.73
USP48-202ENST00000374730 TMEM53Q6P2H8 277 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms