RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 RRAS2P62070 204 aaPredicted RBP12.51□□□□□ -0.41
LDB3-204ENST00000372066 SLC35A1P78382 337 aa12.51□□□□□ -0.41
LDB3-204ENST00000372066 DGCR2P98153 550 aa12.51□□□□□ -0.41
LDB3-204ENST00000372066 ETFDHQ16134 617 aa12.51□□□□□ -0.41
LDB3-204ENST00000372066 FCRLAQ7L513 359 aa12.51□□□□□ -0.41
LDB3-204ENST00000372066 GTPBP8Q8N3Z3 284 aaPredicted RBP12.51□□□□□ -0.41
LDB3-204ENST00000372066 WDSUB1Q8N9V3 476 aa12.51□□□□□ -0.41
LDB3-204ENST00000372066 NOXO1Q8NFA2 376 aa12.51□□□□□ -0.41
LDB3-204ENST00000372066 ST7LQ8TDW4 575 aa12.51□□□□□ -0.41
LDB3-204ENST00000372066 ZFP3Q96NJ6 502 aa12.51□□□□□ -0.41
LDB3-204ENST00000372066 OXGR1Q96P68 337 aa12.51□□□□□ -0.41
LDB3-204ENST00000372066 MRPL13Q9BYD1 178 aaKnown RBP12.51□□□□□ -0.41
LDB3-204ENST00000372066 DDX28Q9NUL7 540 aaKnown RBP12.51□□□□□ -0.41
LDB3-204ENST00000372066 ASF1BQ9NVP2 202 aa12.51□□□□□ -0.41
LDB3-204ENST00000372066 B3GAT1Q9P2W7 334 aa12.51□□□□□ -0.41
LDB3-204ENST00000372066 DHDHQ9UQ10 334 aa12.51□□□□□ -0.41
LDB3-204ENST00000372066 HRH3Q9Y5N1 445 aa12.51□□□□□ -0.41
LDB3-204ENST00000372066 EML6Q6ZMW3 1958 aa12.51□□□□□ -0.41
LDB3-204ENST00000372066 ESPL1Q14674 2120 aa12.5□□□□□ -0.41
LDB3-204ENST00000372066 NSG1A0A0A6YYJ2 146 aa12.5□□□□□ -0.41
LDB3-204ENST00000372066 C7orf66A4D0T2 115 aa12.5□□□□□ -0.41
LDB3-204ENST00000372066 ACOT7O00154 380 aa12.5□□□□□ -0.41
LDB3-204ENST00000372066 EFNA2O43921 213 aa12.5□□□□□ -0.41
LDB3-204ENST00000372066 KRT33AO76009 404 aa12.5□□□□□ -0.41
LDB3-204ENST00000372066 PMS2P2O95744 297 aa12.5□□□□□ -0.41
LDB3-204ENST00000372066 YES1P07947 543 aa12.5□□□□□ -0.41
LDB3-204ENST00000372066 UBCP0CG48 685 aaKnown RBP12.5□□□□□ -0.41
LDB3-204ENST00000372066 COL8A1P27658 744 aa12.5□□□□□ -0.41
LDB3-204ENST00000372066 BTCP35070 178 aa12.5□□□□□ -0.41
LDB3-204ENST00000372066 KLF9Q13886 244 aaPredicted RBP12.5□□□□□ -0.41
LDB3-204ENST00000372066 DCAF10Q5QP82 559 aa12.5□□□□□ -0.41
LDB3-204ENST00000372066 TMEM69Q5SWH9 247 aa12.5□□□□□ -0.41
LDB3-204ENST00000372066 TMEM244Q5VVB8 128 aa12.5□□□□□ -0.41
LDB3-204ENST00000372066 OR7E24Q6IFN5 339 aa12.5□□□□□ -0.41
LDB3-204ENST00000372066 NHLRC1Q6VVB1 395 aa12.5□□□□□ -0.41
LDB3-204ENST00000372066 RHOUQ7L0Q8 258 aa12.5□□□□□ -0.41
LDB3-204ENST00000372066 NDUFAF7Q7L592 441 aa12.5□□□□□ -0.41
LDB3-204ENST00000372066 LINGO2Q7L985 606 aa12.5□□□□□ -0.41
LDB3-204ENST00000372066 SIAH3Q8IW03 269 aa12.5□□□□□ -0.41
LDB3-204ENST00000372066 GALNT16Q8N428 558 aa12.5□□□□□ -0.41
LDB3-204ENST00000372066 OR6X1Q8NH79 312 aa12.5□□□□□ -0.41
LDB3-204ENST00000372066 SYNPRQ8TBG9 265 aa12.5□□□□□ -0.41
LDB3-204ENST00000372066 PAQR8Q8TEZ7 354 aa12.5□□□□□ -0.41
LDB3-204ENST00000372066 RNF133Q8WVZ7 376 aa12.5□□□□□ -0.41
LDB3-204ENST00000372066 AKAP1Q92667 903 aaKnown RBP eCLIP12.5□□□□□ -0.41
LDB3-204ENST00000372066 SLC25A44Q96H78 314 aaPredicted RBP12.5□□□□□ -0.41
LDB3-204ENST00000372066 ACTR6Q9GZN1 396 aa12.5□□□□□ -0.41
LDB3-204ENST00000372066 P4HTMQ9NXG6 502 aa12.5□□□□□ -0.41
LDB3-204ENST00000372066 ING3Q9NXR8 418 aa12.5□□□□□ -0.41
LDB3-204ENST00000372066 EMC3Q9P0I2 261 aa12.5□□□□□ -0.41
LDB3-204ENST00000372066 NUFIP1Q9UHK0 495 aaKnown RBP12.5□□□□□ -0.41
LDB3-204ENST00000372066 ERRFI1Q9UJM3 462 aaPredicted RBP12.5□□□□□ -0.41
LDB3-204ENST00000372066 ING1Q9UK53 422 aaPredicted RBP12.5□□□□□ -0.41
LDB3-204ENST00000372066 HHLA2Q9UM44 414 aa12.5□□□□□ -0.41
LDB3-204ENST00000372066 CLEC4AQ9UMR7 237 aa12.5□□□□□ -0.41
LDB3-204ENST00000372066 MRPS7Q9Y2R9 242 aaKnown RBP12.5□□□□□ -0.41
LDB3-204ENST00000372066 N6AMT1Q9Y5N5 214 aa12.5□□□□□ -0.41
LDB3-204ENST00000372066 TRAV8-7A0A075B6U6 113 aa12.49□□□□□ -0.41
LDB3-204ENST00000372066 A0A1B0GVC2 190 aa12.49□□□□□ -0.41
LDB3-204ENST00000372066 A6NIN4 97 aa12.49□□□□□ -0.41
LDB3-204ENST00000372066 AQP7P3A6NL99 342 aa12.49□□□□□ -0.41
LDB3-204ENST00000372066 SLC17A2O00624 439 aa12.49□□□□□ -0.41
LDB3-204ENST00000372066 TRAF3IP2O43734 574 aaPredicted RBP12.49□□□□□ -0.41
LDB3-204ENST00000372066 CD3GP09693 182 aa12.49□□□□□ -0.41
LDB3-204ENST00000372066 ICAM2P13598 275 aa12.49□□□□□ -0.41
LDB3-204ENST00000372066 ZNF17P17021 662 aa12.49□□□□□ -0.41
LDB3-204ENST00000372066 LAP3P28838 519 aa12.49□□□□□ -0.41
LDB3-204ENST00000372066 GDNFP39905 211 aa12.49□□□□□ -0.41
LDB3-204ENST00000372066 MMP16P51512 607 aa12.49□□□□□ -0.41
LDB3-204ENST00000372066 P2RY4P51582 365 aa12.49□□□□□ -0.41
LDB3-204ENST00000372066 DSCR4P56555 118 aaPredicted RBP12.49□□□□□ -0.41
LDB3-204ENST00000372066 CLRN1P58418 232 aa12.49□□□□□ -0.41
LDB3-204ENST00000372066 GLT8D1Q68CQ7 371 aa12.49□□□□□ -0.41
LDB3-204ENST00000372066 DCXRQ7Z4W1 244 aa12.49□□□□□ -0.41
LDB3-204ENST00000372066 LIX1LQ8IVB5 337 aa12.49□□□□□ -0.41
LDB3-204ENST00000372066 KDM8Q8N371 416 aa12.49□□□□□ -0.41
LDB3-204ENST00000372066 ZADH2Q8N4Q0 377 aa12.49□□□□□ -0.41
LDB3-204ENST00000372066 OR11G2Q8NGC1 345 aa12.49□□□□□ -0.41
LDB3-204ENST00000372066 FCAMRQ8WWV6 532 aa12.49□□□□□ -0.41
LDB3-204ENST00000372066 ORAI1Q96D31 301 aa12.49□□□□□ -0.41
LDB3-204ENST00000372066 OR5B2Q96R09 309 aa12.49□□□□□ -0.41
LDB3-204ENST00000372066 ZNF552Q9H707 407 aaPredicted RBP12.49□□□□□ -0.41
LDB3-204ENST00000372066 NIPAL2Q9H841 368 aa12.49□□□□□ -0.41
LDB3-204ENST00000372066 MOB1AQ9H8S9 216 aa12.49□□□□□ -0.41
LDB3-204ENST00000372066 SH2D2AQ9NP31 389 aa12.49□□□□□ -0.41
LDB3-204ENST00000372066 MED29Q9NX70 200 aa12.49□□□□□ -0.41
LDB3-204ENST00000372066 FBXL2Q9UKC9 423 aa12.49□□□□□ -0.41
LDB3-204ENST00000372066 POU2F3Q9UKI9 436 aa12.49□□□□□ -0.41
LDB3-204ENST00000372066 RBMX2Q9Y388 322 aaKnown RBP12.49□□□□□ -0.41
LDB3-204ENST00000372066 A0A1B0GTH9 108 aa12.48□□□□□ -0.41
LDB3-204ENST00000372066 FAM172BPA6NC97 362 aa12.48□□□□□ -0.41
LDB3-204ENST00000372066 MASP2O00187 686 aa12.48□□□□□ -0.41
LDB3-204ENST00000372066 PNPP00491 289 aa12.48□□□□□ -0.41
LDB3-204ENST00000372066 MAS1P04201 325 aa12.48□□□□□ -0.41
LDB3-204ENST00000372066 TCRBP04435 133 aa12.48□□□□□ -0.41
LDB3-204ENST00000372066 H2BFMP0C1H6 154 aa12.48□□□□□ -0.41
LDB3-204ENST00000372066 PGA4P0DJD7 388 aa12.48□□□□□ -0.41
LDB3-204ENST00000372066 PGA3P0DJD8 388 aa12.48□□□□□ -0.41
LDB3-204ENST00000372066 CD37P11049 281 aa12.48□□□□□ -0.41
LDB3-204ENST00000372066 IGFBP3P17936 291 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms