RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 A6NHS1 94 aa13.32□□□□□ -0.28
NDC1-201ENST00000371429 ABCD4O14678 606 aa13.32□□□□□ -0.28
NDC1-201ENST00000371429 EIF4EP06730 217 aaKnown RBP13.32□□□□□ -0.28
NDC1-201ENST00000371429 GNB2P62879 340 aa13.32□□□□□ -0.28
NDC1-201ENST00000371429 PRICKLE4Q2TBC4 344 aa13.32□□□□□ -0.28
NDC1-201ENST00000371429 EIF2S3LQ2VIR3 472 aaKnown RBP13.32□□□□□ -0.28
NDC1-201ENST00000371429 KHDC1LQ5JSQ8 128 aa13.32□□□□□ -0.28
NDC1-201ENST00000371429 TIGD3Q6B0B8 471 aa13.32□□□□□ -0.28
NDC1-201ENST00000371429 OR1J1Q8NGS3 322 aa13.32□□□□□ -0.28
NDC1-201ENST00000371429 OR10J5Q8NHC4 309 aa13.32□□□□□ -0.28
NDC1-201ENST00000371429 ZNF419Q96HQ0 510 aaPredicted RBP13.32□□□□□ -0.28
NDC1-201ENST00000371429 ING1Q9UK53 422 aaPredicted RBP13.32□□□□□ -0.28
NDC1-201ENST00000371429 PHF1O43189 567 aaPredicted RBP13.31□□□□□ -0.28
NDC1-201ENST00000371429 PMP2P02689 132 aa13.31□□□□□ -0.28
NDC1-201ENST00000371429 GLAP06280 429 aa13.31□□□□□ -0.28
NDC1-201ENST00000371429 CALCBP10092 127 aa13.31□□□□□ -0.28
NDC1-201ENST00000371429 NKX2-5P52952 324 aaPredicted RBP13.31□□□□□ -0.28
NDC1-201ENST00000371429 FAM185AQ8N0U4 392 aa13.31□□□□□ -0.28
NDC1-201ENST00000371429 SYS1Q8N2H4 156 aa13.31□□□□□ -0.28
NDC1-201ENST00000371429 GABARAPL3Q9BY60 117 aa13.31□□□□□ -0.28
NDC1-201ENST00000371429 SLC25A19Q9HC21 320 aa13.31□□□□□ -0.28
NDC1-201ENST00000371429 COL4A1P02462 1669 aa13.31□□□□□ -0.28
NDC1-201ENST00000371429 MEIKINA0A087WXM9 373 aa13.31□□□□□ -0.28
NDC1-201ENST00000371429 FAM90A27PA6NNH2 459 aa13.31□□□□□ -0.28
NDC1-201ENST00000371429 M0QYG6 137 aa13.31□□□□□ -0.28
NDC1-201ENST00000371429 MAGEB4O15481 346 aaPredicted RBP13.31□□□□□ -0.28
NDC1-201ENST00000371429 RAB1AP62820 205 aa13.31□□□□□ -0.28
NDC1-201ENST00000371429 BBS1Q8NFJ9 593 aa13.31□□□□□ -0.28
NDC1-201ENST00000371429 FAM210AQ96ND0 272 aa13.31□□□□□ -0.28
NDC1-201ENST00000371429 ERVMER34-1Q9H9K5 563 aa13.31□□□□□ -0.28
NDC1-201ENST00000371429 SIRPB1O00241 398 aa13.31□□□□□ -0.28
NDC1-201ENST00000371429 CLDN1O95832 211 aa13.31□□□□□ -0.28
NDC1-201ENST00000371429 TATDN3Q17R31 274 aa13.31□□□□□ -0.28
NDC1-201ENST00000371429 SHEQ5VZ18 495 aa13.31□□□□□ -0.28
NDC1-201ENST00000371429 RBMS3Q6XE24 437 aaKnown RBP13.31□□□□□ -0.28
NDC1-201ENST00000371429 D2HGDHQ8N465 521 aa13.31□□□□□ -0.28
NDC1-201ENST00000371429 NOXO1Q8NFA2 376 aa13.31□□□□□ -0.28
NDC1-201ENST00000371429 DEDD2Q8WXF8 326 aa13.31□□□□□ -0.28
NDC1-201ENST00000371429 DVL3Q92997 716 aaPredicted RBP13.31□□□□□ -0.28
NDC1-201ENST00000371429 SPACA5Q96QH8 159 aa13.31□□□□□ -0.28
NDC1-201ENST00000371429 PSD2Q9BQI7 771 aa13.31□□□□□ -0.28
NDC1-201ENST00000371429 GABARAPL1Q9H0R8 117 aa13.31□□□□□ -0.28
NDC1-201ENST00000371429 HEYLQ9NQ87 328 aaPredicted RBP13.31□□□□□ -0.28
NDC1-201ENST00000371429 ASF1BQ9NVP2 202 aa13.31□□□□□ -0.28
NDC1-201ENST00000371429 SULT1C4O75897 302 aa13.31□□□□□ -0.28
NDC1-201ENST00000371429 DEFA4P12838 97 aa13.31□□□□□ -0.28
NDC1-201ENST00000371429 TPT1P13693 172 aaKnown RBP13.31□□□□□ -0.28
NDC1-201ENST00000371429 AKR1C1Q04828 323 aa13.31□□□□□ -0.28
NDC1-201ENST00000371429 ZNF74Q16587 644 aa13.31□□□□□ -0.28
NDC1-201ENST00000371429 TFAP2EQ6VUC0 442 aa13.31□□□□□ -0.28
NDC1-201ENST00000371429 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.31□□□□□ -0.28
NDC1-201ENST00000371429 ZDHHC23Q8IYP9 409 aa13.31□□□□□ -0.28
NDC1-201ENST00000371429 OR2M2Q96R28 347 aa13.31□□□□□ -0.28
NDC1-201ENST00000371429 PBOV1Q9GZY1 135 aa13.31□□□□□ -0.28
NDC1-201ENST00000371429 ZNF831Q5JPB2 1677 aa13.31□□□□□ -0.28
NDC1-201ENST00000371429 SLC17A1Q14916 467 aa13.3□□□□□ -0.28
NDC1-201ENST00000371429 LHFPL2Q6ZUX7 228 aa13.3□□□□□ -0.28
NDC1-201ENST00000371429 PRSS35Q8N3Z0 413 aa13.3□□□□□ -0.28
NDC1-201ENST00000371429 PLEKHF2Q9H8W4 249 aa13.3□□□□□ -0.28
NDC1-201ENST00000371429 R4GMQ9 66 aa13.3□□□□□ -0.28
NDC1-201ENST00000371429 COL11A2P13942 1736 aaPredicted RBP13.3□□□□□ -0.28
NDC1-201ENST00000371429 C21orf140B9A014 251 aa13.3□□□□□ -0.28
NDC1-201ENST00000371429 ALG1L2C9J202 215 aa13.3□□□□□ -0.28
NDC1-201ENST00000371429 OMGP23515 440 aa13.3□□□□□ -0.28
NDC1-201ENST00000371429 PLXDC2Q6UX71 529 aa13.3□□□□□ -0.28
NDC1-201ENST00000371429 ARL11Q969Q4 196 aa13.3□□□□□ -0.28
NDC1-201ENST00000371429 SLC22A13Q9Y226 551 aa13.3□□□□□ -0.28
NDC1-201ENST00000371429 ARRDC5A6NEK1 342 aa13.3□□□□□ -0.28
NDC1-201ENST00000371429 BOLA2-SMG1P6H3BVE0 249 aa13.3□□□□□ -0.28
NDC1-201ENST00000371429 AGPAT2O15120 278 aa13.3□□□□□ -0.28
NDC1-201ENST00000371429 PCSK6P29122 969 aa13.3□□□□□ -0.28
NDC1-201ENST00000371429 FZD5Q13467 585 aa13.3□□□□□ -0.28
NDC1-201ENST00000371429 GSG1Q2KHT4 349 aa13.3□□□□□ -0.28
NDC1-201ENST00000371429 PHLDA2Q53GA4 152 aa13.3□□□□□ -0.28
NDC1-201ENST00000371429 HEPHL1Q6MZM0 1159 aa13.3□□□□□ -0.28
NDC1-201ENST00000371429 ZNF321PQ8N8H1 164 aa13.3□□□□□ -0.28
NDC1-201ENST00000371429 GIMAP1Q8WWP7 306 aa13.3□□□□□ -0.28
NDC1-201ENST00000371429 HPP00738 406 aa13.3□□□□□ -0.28
NDC1-201ENST00000371429 PRR35P0CG20 571 aa13.3□□□□□ -0.28
NDC1-201ENST00000371429 CDAP32320 146 aa13.3□□□□□ -0.28
NDC1-201ENST00000371429 KIAA0040Q15053 153 aa13.3□□□□□ -0.28
NDC1-201ENST00000371429 SOWAHCQ53LP3 525 aaPredicted RBP13.3□□□□□ -0.28
NDC1-201ENST00000371429 SPATA46Q5T0L3 261 aa13.3□□□□□ -0.28
NDC1-201ENST00000371429 TMEM43Q9BTV4 400 aa13.3□□□□□ -0.28
NDC1-201ENST00000371429 JAM3Q9BX67 310 aa13.3□□□□□ -0.28
NDC1-201ENST00000371429 LGALS8O00214 317 aa13.29□□□□□ -0.28
NDC1-201ENST00000371429 MED6O75586 246 aa13.29□□□□□ -0.28
NDC1-201ENST00000371429 SRP9P49458 86 aaKnown RBP13.29□□□□□ -0.28
NDC1-201ENST00000371429 SLC35A2P78381 396 aa13.29□□□□□ -0.28
NDC1-201ENST00000371429 C6orf183Q5T699 404 aa13.29□□□□□ -0.28
NDC1-201ENST00000371429 TMEM211Q6ICI0 200 aa13.29□□□□□ -0.28
NDC1-201ENST00000371429 ZNF546Q86UE3 836 aa13.29□□□□□ -0.28
NDC1-201ENST00000371429 APOBEC3DQ96AK3 386 aaPredicted RBP13.29□□□□□ -0.28
NDC1-201ENST00000371429 SHARPINQ9H0F6 387 aa13.29□□□□□ -0.28
NDC1-201ENST00000371429 K7EPK0 472 aa13.29□□□□□ -0.28
NDC1-201ENST00000371429 GK2Q14410 553 aaPredicted RBP13.29□□□□□ -0.28
NDC1-201ENST00000371429 B3GNTL1Q67FW5 361 aaPredicted RBP13.29□□□□□ -0.28
NDC1-201ENST00000371429 PAQR6Q6TCH4 344 aa13.29□□□□□ -0.28
NDC1-201ENST00000371429 PRSS42Q7Z5A4 293 aa13.29□□□□□ -0.28
NDC1-201ENST00000371429 DPPA2Q7Z7J5 298 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms