RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 PPP1R3CQ9UQK1 317 aa11.04□□□□□ -0.64
RPF1-201ENST00000370654 POLR3KQ9Y2Y1 108 aaPredicted RBP11.04□□□□□ -0.64
RPF1-201ENST00000370654 INSIG2Q9Y5U4 225 aa11.04□□□□□ -0.64
RPF1-201ENST00000370654 LHFPL6Q9Y693 200 aa11.04□□□□□ -0.64
RPF1-201ENST00000370654 PPIAL4EA0A075B759 164 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 PPIAL4CA0A0B4J2A2 164 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 A0A1W2PRQ8 180 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 CEACAM18A8MTB9 384 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 PPIAL4DF5H284 164 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 MLNRO43193 412 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 AHCYL1O43865 530 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 PPP1R3DO95685 299 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 H1F0P07305 194 aaKnown RBP11.03□□□□□ -0.64
RPF1-201ENST00000370654 WNT2P09544 360 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 PPIAL4FP0DN26 164 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 CD80P33681 288 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 NUDT2P50583 147 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 LSM6P62312 80 aaKnown RBP11.03□□□□□ -0.64
RPF1-201ENST00000370654 HIST1H3AP68431 136 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 PAX2Q02962 417 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 DGCR6Q14129 220 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 KCNMB1Q16558 191 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 TMEM155Q4W5P6 130 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 ZMAT1Q5H9K5 638 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 FGD3Q5JSP0 725 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 HIST2H3PS2Q5TEC6 136 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 HIST2H3AQ71DI3 136 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 ZER1Q7Z7L7 766 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 NAA40Q86UY6 237 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 TEX29Q8N6K0 151 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 RNF148Q8N7C7 305 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 ATG16L2Q8NAA4 619 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 MEGF10Q96KG7 1140 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 JMJD8Q96S16 334 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 GPX7Q96SL4 187 aaPredicted RBP11.03□□□□□ -0.64
RPF1-201ENST00000370654 HOPXQ9BPY8 73 aaPredicted RBP11.03□□□□□ -0.64
RPF1-201ENST00000370654 KCTD14Q9BQ13 255 aaPredicted RBP11.03□□□□□ -0.64
RPF1-201ENST00000370654 WACQ9BTA9 647 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 ANKRD19PQ9H560 264 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 TMEM165Q9HC07 324 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 ABCD2Q9UBJ2 740 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 PCDHGB1Q9Y5G3 927 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 AUP1Q9Y679 476 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 IGLV1-36A0A0B4J1U3 117 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 DNAJC9-AS1A6NH13 148 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 UNC119BA6NIH7 251 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 A8MXK9 166 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 F5H5P2 479 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 TXNDC12O95881 172 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 HLA-DPB1P04440 258 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 IGHV4-38-2P0DP08 117 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 RAC2P15153 192 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 TNFRSF1AP19438 455 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 PSME3P61289 254 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 PAX8Q06710 450 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 GPR139Q6DWJ6 353 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 FBXW12Q6X9E4 464 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 HACD2Q6Y1H2 254 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 RRM2BQ7LG56 351 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 LINC00346Q8IVM7 164 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 OR6V1Q8N148 313 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 KLHL36Q8N4N3 616 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 SPICQ8N5J4 248 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 BHLHE23Q8NDY6 225 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 OR8G5Q8NG78 346 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 DHRS1Q96LJ7 313 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 FN3KQ9H479 309 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 SRA1Q9HD15 236 aaKnown RBP11.03□□□□□ -0.64
RPF1-201ENST00000370654 NUP50Q9UKX7 468 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 TMEM5Q9Y2B1 443 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 AP3M1Q9Y2T2 418 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 V9GYQ6 96 aa11.03□□□□□ -0.64
RPF1-201ENST00000370654 C5orf63A6NC05 138 aa11.02□□□□□ -0.65
RPF1-201ENST00000370654 PSKH1P11801 424 aa11.02□□□□□ -0.65
RPF1-201ENST00000370654 TNFSF4P23510 183 aa11.02□□□□□ -0.65
RPF1-201ENST00000370654 FPR2P25090 351 aa11.02□□□□□ -0.65
RPF1-201ENST00000370654 MDH2P40926 338 aaKnown RBP11.02□□□□□ -0.65
RPF1-201ENST00000370654 CENPAP49450 140 aa11.02□□□□□ -0.65
RPF1-201ENST00000370654 KRTAP27-1Q3LI81 207 aa11.02□□□□□ -0.65
RPF1-201ENST00000370654 GLYATQ6IB77 296 aa11.02□□□□□ -0.65
RPF1-201ENST00000370654 DPY19L2P2Q6ZN68 376 aa11.02□□□□□ -0.65
RPF1-201ENST00000370654 CFAP77Q6ZQR2 320 aa11.02□□□□□ -0.65
RPF1-201ENST00000370654 DOK3Q7L591 496 aa11.02□□□□□ -0.65
RPF1-201ENST00000370654 MOGAT3Q86VF5 341 aa11.02□□□□□ -0.65
RPF1-201ENST00000370654 CYP4Z1Q86W10 505 aa11.02□□□□□ -0.65
RPF1-201ENST00000370654 C19orf18Q8NEA5 215 aa11.02□□□□□ -0.65
RPF1-201ENST00000370654 POP5Q969H6 163 aaKnown RBP11.02□□□□□ -0.65
RPF1-201ENST00000370654 DACT3Q96B18 629 aaPredicted RBP11.02□□□□□ -0.65
RPF1-201ENST00000370654 NMNAT3Q96T66 252 aa11.02□□□□□ -0.65
RPF1-201ENST00000370654 MYLK2Q9H1R3 596 aa11.02□□□□□ -0.65
RPF1-201ENST00000370654 EFCAB1Q9HAE3 211 aa11.02□□□□□ -0.65
RPF1-201ENST00000370654 DCAF13Q9NV06 445 aaKnown RBP11.02□□□□□ -0.65
RPF1-201ENST00000370654 RPS6KA6Q9UK32 745 aa11.02□□□□□ -0.65
RPF1-201ENST00000370654 B9D1Q9UPM9 204 aa11.02□□□□□ -0.65
RPF1-201ENST00000370654 MDFIC2A0A1B0GVS7 189 aa11.01□□□□□ -0.65
RPF1-201ENST00000370654 KCNAB3O43448 404 aa11.01□□□□□ -0.65
RPF1-201ENST00000370654 SEMG1P04279 462 aa11.01□□□□□ -0.65
RPF1-201ENST00000370654 HKR1P10072 659 aa11.01□□□□□ -0.65
RPF1-201ENST00000370654 HIST1H1CP16403 213 aaKnown RBP11.01□□□□□ -0.65
RPF1-201ENST00000370654 RHCEP18577 417 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms