RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 MARCH7Q9H992 704 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 SIAEQ9HAT2 523 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 DUSP22Q9NRW4 184 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 ARL15Q9NXU5 204 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 KLHL13Q9P2N7 655 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 KIF25Q9UIL4 384 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 MEMO1Q9Y316 297 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 CROCCQ5TZA2 2017 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 A0A1B0GV90 55 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 M0QYG6 137 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 TNFSF11O14788 317 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 NUPL2O15504 423 aaKnown RBP3.42□□□□□ -1.86
MCF2-203ENST00000370576 GPR75O95800 540 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 THY1P04216 161 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 IGF1P05019 195 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 ELK4P28324 431 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 ETV6P41212 452 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 PGDP52209 483 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 ZNF136P52737 540 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 RPS13P62277 151 aaKnown RBP3.42□□□□□ -1.86
MCF2-203ENST00000370576 RPS4XP62701 263 aaKnown RBP3.42□□□□□ -1.86
MCF2-203ENST00000370576 CDK5Q00535 292 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 CHRNB3Q05901 458 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 MELKQ14680 651 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 TAF13Q15543 124 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 VPS26BQ4G0F5 336 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 LRRN1Q6UXK5 716 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 TMPRSS11AQ6ZMR5 421 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 ZNF546Q86UE3 836 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 TMEM123Q8N131 208 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 KRTCAP2Q8N6L1 136 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 MAGEE2Q8TD90 523 aaPredicted RBP3.42□□□□□ -1.86
MCF2-203ENST00000370576 TP53INP1Q96A56 240 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 TAPBPLQ9BX59 468 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 PARD6AQ9NPB6 346 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 FAIMQ9NVQ4 179 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 CD84Q9UIB8 345 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 TP53TG5Q9Y2B4 290 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 POLR3HQ9Y535 204 aaPredicted RBP3.42□□□□□ -1.86
MCF2-203ENST00000370576 CDH23Q9H251 3354 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 CLDN24A6NM45 220 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 SOCS2O14508 198 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 TXNDC9O14530 226 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 OR10H3O60404 316 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 DEAF1O75398 565 aaPredicted RBP3.42□□□□□ -1.86
MCF2-203ENST00000370576 TNFP01375 233 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 LAMP1P11279 417 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 MUC1P15941 1255 aaPredicted RBP3.42□□□□□ -1.86
MCF2-203ENST00000370576 LIM2P55344 173 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 HBA1P69905 142 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 FLI1Q01543 452 aaPredicted RBP3.42□□□□□ -1.86
MCF2-203ENST00000370576 SELENBP1Q13228 472 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 GGTLC2Q14390 218 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 PTGR1Q14914 329 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 PTGES3Q15185 160 aaKnown RBP3.42□□□□□ -1.86
MCF2-203ENST00000370576 CTU2Q2VPK5 515 aaKnown RBP3.42□□□□□ -1.86
MCF2-203ENST00000370576 RBM48Q5RL73 367 aaKnown RBP3.42□□□□□ -1.86
MCF2-203ENST00000370576 UBE2UQ5VVX9 321 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 FAM71F2Q6NXP2 309 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 TBPL2Q6SJ96 375 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 PRSS48Q7RTY5 328 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 TMPRSS11BQ86T26 416 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 AMIGO1Q86WK6 493 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 OR4N2Q8NGD1 307 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 OR9A4Q8NGU2 314 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 OR5K1Q8NHB7 308 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 TAMM41Q96BW9 452 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 CCDC124Q96CT7 223 aaKnown RBP3.42□□□□□ -1.86
MCF2-203ENST00000370576 CNRIP1Q96F85 164 aaPredicted RBP3.42□□□□□ -1.86
MCF2-203ENST00000370576 ATXN7L3BQ96GX2 97 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 VSTM2LQ96N03 204 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 C17orf62Q9BQA9 187 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 PRSS27Q9BQR3 290 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 GSDMCQ9BYG8 508 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 GLIPR2Q9H4G4 154 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 PLEKHA1Q9HB21 404 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 RNF150Q9ULK6 438 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 EXOGQ9Y2C4 368 aaKnown RBP3.42□□□□□ -1.86
MCF2-203ENST00000370576 AP4S1Q9Y587 144 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 TRBV9A0A0B4J1U6 114 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 INPP4BO15327 924 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 SLC31A1O15431 190 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 DBTP11182 482 aaKnown RBP3.42□□□□□ -1.86
MCF2-203ENST00000370576 HOXB4P17483 251 aaPredicted RBP3.42□□□□□ -1.86
MCF2-203ENST00000370576 SLC2A5P22732 501 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 CD1CP29017 333 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 PPIFP30405 207 aaKnown RBP3.42□□□□□ -1.86
MCF2-203ENST00000370576 KDELR2P33947 212 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 PTGER1P34995 402 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 HPCAL1P37235 193 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 NUDT2P50583 147 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 KCNK10P57789 538 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 CDC42P60953 191 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 SYT6Q5T7P8 510 aaPredicted RBP3.42□□□□□ -1.86
MCF2-203ENST00000370576 STUMQ69YW2 141 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.42□□□□□ -1.86
MCF2-203ENST00000370576 RBMS3Q6XE24 437 aaKnown RBP3.42□□□□□ -1.86
MCF2-203ENST00000370576 MDGA2Q7Z553 956 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 DHFR2Q86XF0 187 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 OR4C6Q8NH72 309 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms