RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 TBPP20226 339 aa12.76□□□□□ -0.37
CD48-201ENST00000368045 POU3F2P20265 443 aaPredicted RBP12.76□□□□□ -0.37
CD48-201ENST00000368045 IL11P20809 199 aa12.76□□□□□ -0.37
CD48-201ENST00000368045 MSX1P28360 303 aa12.76□□□□□ -0.37
CD48-201ENST00000368045 FMODQ06828 376 aa12.76□□□□□ -0.37
CD48-201ENST00000368045 ZNF260Q3ZCT1 412 aa12.76□□□□□ -0.37
CD48-201ENST00000368045 FAHD2BQ6P2I3 314 aaPredicted RBP12.76□□□□□ -0.37
CD48-201ENST00000368045 KLHL24Q6TFL4 600 aa12.76□□□□□ -0.37
CD48-201ENST00000368045 ZNF813Q6ZN06 617 aa12.76□□□□□ -0.37
CD48-201ENST00000368045 COX15Q7KZN9 410 aa12.76□□□□□ -0.37
CD48-201ENST00000368045 BEST3Q8N1M1 668 aa12.76□□□□□ -0.37
CD48-201ENST00000368045 SLC22A24Q8N4F4 322 aa12.76□□□□□ -0.37
CD48-201ENST00000368045 ADPRHL1Q8NDY3 354 aa12.76□□□□□ -0.37
CD48-201ENST00000368045 COQ8AQ8NI60 647 aa12.76□□□□□ -0.37
CD48-201ENST00000368045 FAHD2AQ96GK7 314 aa12.76□□□□□ -0.37
CD48-201ENST00000368045 SLC25A32Q9H2D1 315 aa12.76□□□□□ -0.37
CD48-201ENST00000368045 ZNF768Q9H5H4 540 aaKnown RBP12.76□□□□□ -0.37
CD48-201ENST00000368045 MOB1AQ9H8S9 216 aa12.76□□□□□ -0.37
CD48-201ENST00000368045 CTSFQ9UBX1 484 aa12.76□□□□□ -0.37
CD48-201ENST00000368045 SUSD2Q9UGT4 822 aa12.76□□□□□ -0.37
CD48-201ENST00000368045 GPN3Q9UHW5 284 aaPredicted RBP12.76□□□□□ -0.37
CD48-201ENST00000368045 GLS2Q9UI32 602 aa12.76□□□□□ -0.37
CD48-201ENST00000368045 TRAV14DV4A0A0A6YYC5 116 aa12.75□□□□□ -0.37
CD48-201ENST00000368045 LIPT2A6NK58 231 aa12.75□□□□□ -0.37
CD48-201ENST00000368045 VSTM2BA6NLU5 285 aa12.75□□□□□ -0.37
CD48-201ENST00000368045 P2RY10O00398 339 aa12.75□□□□□ -0.37
CD48-201ENST00000368045 FGF2P09038 288 aa12.75□□□□□ -0.37
CD48-201ENST00000368045 CD34P28906 385 aa12.75□□□□□ -0.37
CD48-201ENST00000368045 CSNK1EP49674 416 aaKnown RBP12.75□□□□□ -0.37
CD48-201ENST00000368045 POU3F1Q03052 451 aaPredicted RBP12.75□□□□□ -0.37
CD48-201ENST00000368045 DHRS2Q13268 280 aa12.75□□□□□ -0.37
CD48-201ENST00000368045 ZNF345Q14585 488 aa12.75□□□□□ -0.37
CD48-201ENST00000368045 NR0B2Q15466 257 aa12.75□□□□□ -0.37
CD48-201ENST00000368045 RNASE10Q5GAN6 216 aaKnown RBP12.75□□□□□ -0.37
CD48-201ENST00000368045 SLC25A53Q5H9E4 307 aa12.75□□□□□ -0.37
CD48-201ENST00000368045 RHBDD2Q6NTF9 364 aa12.75□□□□□ -0.37
CD48-201ENST00000368045 RABEPKQ7Z6M1 372 aa12.75□□□□□ -0.37
CD48-201ENST00000368045 ANKRD37Q7Z713 158 aa12.75□□□□□ -0.37
CD48-201ENST00000368045 TMED4Q7Z7H5 227 aa12.75□□□□□ -0.37
CD48-201ENST00000368045 SLC25A42Q86VD7 318 aa12.75□□□□□ -0.37
CD48-201ENST00000368045 LINC00346Q8IVM7 164 aa12.75□□□□□ -0.37
CD48-201ENST00000368045 DTWD2Q8NBA8 298 aa12.75□□□□□ -0.37
CD48-201ENST00000368045 NFAM1Q8NET5 270 aaPredicted RBP12.75□□□□□ -0.37
CD48-201ENST00000368045 OR4D6Q8NGJ1 314 aa12.75□□□□□ -0.37
CD48-201ENST00000368045 OR13C8Q8NGS7 320 aa12.75□□□□□ -0.37
CD48-201ENST00000368045 CXorf58Q96LI9 332 aa12.75□□□□□ -0.37
CD48-201ENST00000368045 C5orf34Q96MH7 638 aa12.75□□□□□ -0.37
CD48-201ENST00000368045 SLC6A7Q99884 636 aa12.75□□□□□ -0.37
CD48-201ENST00000368045 OR14I1A6ND48 311 aa12.74□□□□□ -0.37
CD48-201ENST00000368045 TMEM235A6NFC5 223 aa12.74□□□□□ -0.37
CD48-201ENST00000368045 RAB27BO00194 218 aa12.74□□□□□ -0.37
CD48-201ENST00000368045 TOX3O15405 576 aaPredicted RBP12.74□□□□□ -0.37
CD48-201ENST00000368045 ALOX12BO75342 701 aa12.74□□□□□ -0.37
CD48-201ENST00000368045 OR2F2O95006 317 aa12.74□□□□□ -0.37
CD48-201ENST00000368045 FBXW4P57775 412 aa12.74□□□□□ -0.37
CD48-201ENST00000368045 QRFPP83859 136 aa12.74□□□□□ -0.37
CD48-201ENST00000368045 OR2F1Q13607 317 aa12.74□□□□□ -0.37
CD48-201ENST00000368045 MOGAT2Q3SYC2 334 aa12.74□□□□□ -0.37
CD48-201ENST00000368045 ZNF546Q86UE3 836 aa12.74□□□□□ -0.37
CD48-201ENST00000368045 FJX1Q86VR8 437 aa12.74□□□□□ -0.37
CD48-201ENST00000368045 KDM8Q8N371 416 aa12.74□□□□□ -0.37
CD48-201ENST00000368045 APCDD1LQ8NCL9 501 aa12.74□□□□□ -0.37
CD48-201ENST00000368045 OR1M1Q8NGA1 313 aa12.74□□□□□ -0.37
CD48-201ENST00000368045 OR1J2Q8NGS2 313 aa12.74□□□□□ -0.37
CD48-201ENST00000368045 STT3BQ8TCJ2 826 aa12.74□□□□□ -0.37
CD48-201ENST00000368045 C11orf40Q8WZ69 217 aa12.74□□□□□ -0.37
CD48-201ENST00000368045 FGGYQ96C11 551 aa12.74□□□□□ -0.37
CD48-201ENST00000368045 SLAMF6Q96DU3 332 aa12.74□□□□□ -0.37
CD48-201ENST00000368045 ARL5BQ96KC2 179 aa12.74□□□□□ -0.37
CD48-201ENST00000368045 B3GNT4Q9C0J1 378 aa12.74□□□□□ -0.37
CD48-201ENST00000368045 CENPMQ9NSP4 180 aa12.74□□□□□ -0.37
CD48-201ENST00000368045 PLEKHA6Q9Y2H5 1048 aa12.74□□□□□ -0.37
CD48-201ENST00000368045 RPH3AQ9Y2J0 694 aaPredicted RBP12.74□□□□□ -0.37
CD48-201ENST00000368045 MTCH2Q9Y6C9 303 aa12.74□□□□□ -0.37
CD48-201ENST00000368045 MYO9BQ13459 2157 aa12.74□□□□□ -0.37
CD48-201ENST00000368045 IGLV3-32A0A0A0MS00 114 aa12.74□□□□□ -0.37
CD48-201ENST00000368045 IL2RAP01589 272 aa12.74□□□□□ -0.37
CD48-201ENST00000368045 TTRP02766 147 aa12.74□□□□□ -0.37
CD48-201ENST00000368045 FCER2P06734 321 aa12.74□□□□□ -0.37
CD48-201ENST00000368045 HOXD4P09016 255 aaPredicted RBP12.74□□□□□ -0.37
CD48-201ENST00000368045 FOSL2P15408 326 aa12.74□□□□□ -0.37
CD48-201ENST00000368045 ZNF28P17035 718 aa12.74□□□□□ -0.37
CD48-201ENST00000368045 LAP3P28838 519 aa12.74□□□□□ -0.37
CD48-201ENST00000368045 FOXF1Q12946 379 aa12.74□□□□□ -0.37
CD48-201ENST00000368045 THEM4Q5T1C6 240 aa12.74□□□□□ -0.37
CD48-201ENST00000368045 ZNF529Q6P280 563 aa12.74□□□□□ -0.37
CD48-201ENST00000368045 RHOUQ7L0Q8 258 aa12.74□□□□□ -0.37
CD48-201ENST00000368045 LYG2Q86SG7 212 aa12.74□□□□□ -0.37
CD48-201ENST00000368045 TRAPPC6BQ86SZ2 158 aa12.74□□□□□ -0.37
CD48-201ENST00000368045 KCNRGQ8N5I3 272 aa12.74□□□□□ -0.37
CD48-201ENST00000368045 ACBD4Q8NC06 268 aa12.74□□□□□ -0.37
CD48-201ENST00000368045 OR5D14Q8NGL3 314 aa12.74□□□□□ -0.37
CD48-201ENST00000368045 ZBTB8AQ96BR9 441 aa12.74□□□□□ -0.37
CD48-201ENST00000368045 MRGPRX4Q96LA9 322 aa12.74□□□□□ -0.37
CD48-201ENST00000368045 LINC00052Q96N35 136 aa12.74□□□□□ -0.37
CD48-201ENST00000368045 NKX3-1Q99801 234 aaPredicted RBP12.74□□□□□ -0.37
CD48-201ENST00000368045 PBOV1Q9GZY1 135 aa12.74□□□□□ -0.37
CD48-201ENST00000368045 CNTD2Q9H8S5 307 aa12.74□□□□□ -0.37
CD48-201ENST00000368045 SLC22A11Q9NSA0 550 aa12.74□□□□□ -0.37
CD48-201ENST00000368045 COMMD9Q9P000 198 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms