RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 ARF3P61204 181 aaPredicted RBP10.33□□□□□ -0.76
USF1-201ENST00000368019 BIKQ13323 160 aa10.33□□□□□ -0.76
USF1-201ENST00000368019 ERV3-1Q14264 604 aa10.33□□□□□ -0.76
USF1-201ENST00000368019 GPR18Q14330 331 aa10.33□□□□□ -0.76
USF1-201ENST00000368019 EXOSC7Q15024 291 aaKnown RBP10.33□□□□□ -0.76
USF1-201ENST00000368019 RAB11BQ15907 218 aa10.33□□□□□ -0.76
USF1-201ENST00000368019 ZNF74Q16587 644 aa10.33□□□□□ -0.76
USF1-201ENST00000368019 PABPC1L2AQ5JQF8 200 aa10.33□□□□□ -0.76
USF1-201ENST00000368019 STEAP1BQ6NZ63 245 aa10.33□□□□□ -0.76
USF1-201ENST00000368019 FAHD2BQ6P2I3 314 aaPredicted RBP10.33□□□□□ -0.76
USF1-201ENST00000368019 TMEM205Q6UW68 189 aa10.33□□□□□ -0.76
USF1-201ENST00000368019 SERPINA12Q8IW75 414 aa10.33□□□□□ -0.76
USF1-201ENST00000368019 OR5M8Q8NGP6 311 aa10.33□□□□□ -0.76
USF1-201ENST00000368019 ZNRF4Q8WWF5 429 aa10.33□□□□□ -0.76
USF1-201ENST00000368019 GCDHQ92947 438 aaPredicted RBP10.33□□□□□ -0.76
USF1-201ENST00000368019 C3orf49Q96BT1 292 aa10.33□□□□□ -0.76
USF1-201ENST00000368019 FAHD2AQ96GK7 314 aa10.33□□□□□ -0.76
USF1-201ENST00000368019 C4orf45Q96LM5 186 aa10.33□□□□□ -0.76
USF1-201ENST00000368019 TTTY10Q9BZA0 68 aa10.33□□□□□ -0.76
USF1-201ENST00000368019 TSPAN10Q9H1Z9 355 aaPredicted RBP10.33□□□□□ -0.76
USF1-201ENST00000368019 BARX1Q9HBU1 254 aaPredicted RBP10.33□□□□□ -0.76
USF1-201ENST00000368019 GPR160Q9UJ42 338 aa10.33□□□□□ -0.76
USF1-201ENST00000368019 PURGQ9UJV8 347 aaKnown RBP10.33□□□□□ -0.76
USF1-201ENST00000368019 PADI1Q9ULC6 663 aa10.33□□□□□ -0.76
USF1-201ENST00000368019 ADAM18Q9Y3Q7 739 aa10.33□□□□□ -0.76
USF1-201ENST00000368019 ZNF175Q9Y473 711 aa10.33□□□□□ -0.76
USF1-201ENST00000368019 CENPEQ02224 2701 aa10.33□□□□□ -0.76
USF1-201ENST00000368019 SCN2AQ99250 2005 aa10.33□□□□□ -0.76
USF1-201ENST00000368019 IGKV1D-42A0A075B6H8 117 aa10.32□□□□□ -0.76
USF1-201ENST00000368019 TRAV14DV4A0A0A6YYC5 116 aa10.32□□□□□ -0.76
USF1-201ENST00000368019 A0A0J9YY10 115 aa10.32□□□□□ -0.76
USF1-201ENST00000368019 KANTRA0A1W2PQU2 76 aa10.32□□□□□ -0.76
USF1-201ENST00000368019 TMEM82A0PJX8 343 aa10.32□□□□□ -0.76
USF1-201ENST00000368019 TMEM72A0PK05 275 aa10.32□□□□□ -0.76
USF1-201ENST00000368019 RNF222A6NCQ9 220 aa10.32□□□□□ -0.76
USF1-201ENST00000368019 C2orf74A8MZ97 194 aa10.32□□□□□ -0.76
USF1-201ENST00000368019 PRR32B1ATL7 298 aa10.32□□□□□ -0.76
USF1-201ENST00000368019 MKRN2OSH3BPM6 223 aa10.32□□□□□ -0.76
USF1-201ENST00000368019 ADAM11O75078 769 aa10.32□□□□□ -0.76
USF1-201ENST00000368019 TIAF1O95411 115 aa10.32□□□□□ -0.76
USF1-201ENST00000368019 CSTAP01040 98 aa10.32□□□□□ -0.76
USF1-201ENST00000368019 IGKV1D-16P01601 117 aa10.32□□□□□ -0.76
USF1-201ENST00000368019 RLN1P04808 185 aa10.32□□□□□ -0.76
USF1-201ENST00000368019 ASAH2BP0C7U1 165 aa10.32□□□□□ -0.76
USF1-201ENST00000368019 OR8G3PP0DMU2 310 aa10.32□□□□□ -0.76
USF1-201ENST00000368019 ICAM2P13598 275 aa10.32□□□□□ -0.76
USF1-201ENST00000368019 GTF2F2P13984 249 aa10.32□□□□□ -0.76
USF1-201ENST00000368019 CDKN2AP42771 156 aaKnown RBP10.32□□□□□ -0.76
USF1-201ENST00000368019 CLDN12P56749 244 aa10.32□□□□□ -0.76
USF1-201ENST00000368019 PPP1CAP62136 330 aa10.32□□□□□ -0.76
USF1-201ENST00000368019 RPS15P62841 145 aaKnown RBP10.32□□□□□ -0.76
USF1-201ENST00000368019 MEF2DQ14814 521 aa10.32□□□□□ -0.76
USF1-201ENST00000368019 VWA2Q5GFL6 755 aa10.32□□□□□ -0.76
USF1-201ENST00000368019 EEF1A1P5Q5VTE0 462 aa10.32□□□□□ -0.76
USF1-201ENST00000368019 FNDC7Q5VTL7 733 aa10.32□□□□□ -0.76
USF1-201ENST00000368019 GLT8D1Q68CQ7 371 aa10.32□□□□□ -0.76
USF1-201ENST00000368019 ATG4DQ86TL0 474 aaPredicted RBP10.32□□□□□ -0.76
USF1-201ENST00000368019 GABRG1Q8N1C3 465 aa10.32□□□□□ -0.76
USF1-201ENST00000368019 ARMC10Q8N2F6 343 aa10.32□□□□□ -0.76
USF1-201ENST00000368019 ZDHHC22Q8N966 263 aa10.32□□□□□ -0.76
USF1-201ENST00000368019 TMEM52Q8NDY8 209 aa10.32□□□□□ -0.76
USF1-201ENST00000368019 OR52B4Q8NGK2 314 aa10.32□□□□□ -0.76
USF1-201ENST00000368019 FBXW5Q969U6 566 aa10.32□□□□□ -0.76
USF1-201ENST00000368019 RASD2Q96D21 266 aa10.32□□□□□ -0.76
USF1-201ENST00000368019 ZDHHC12Q96GR4 267 aa10.32□□□□□ -0.76
USF1-201ENST00000368019 SLC41A2Q96JW4 573 aa10.32□□□□□ -0.76
USF1-201ENST00000368019 OR8B4Q96RC9 309 aa10.32□□□□□ -0.76
USF1-201ENST00000368019 NUDT16L1Q9BRJ7 211 aaKnown RBP10.32□□□□□ -0.76
USF1-201ENST00000368019 EXO5Q9H790 373 aa10.32□□□□□ -0.76
USF1-201ENST00000368019 COMMD9Q9P000 198 aa10.32□□□□□ -0.76
USF1-201ENST00000368019 LAMP5Q9UJQ1 280 aa10.32□□□□□ -0.76
USF1-201ENST00000368019 TNFSF18Q9UNG2 199 aa10.32□□□□□ -0.76
USF1-201ENST00000368019 TRAV8-7A0A075B6U6 113 aa10.31□□□□□ -0.76
USF1-201ENST00000368019 IGHV5-51A0A0C4DH38 117 aa10.31□□□□□ -0.76
USF1-201ENST00000368019 TMEM272A0A1B0GTI8 110 aa10.31□□□□□ -0.76
USF1-201ENST00000368019 ELOA3DA6NLF2 546 aaPredicted RBP10.31□□□□□ -0.76
USF1-201ENST00000368019 C21orf140B9A014 251 aa10.31□□□□□ -0.76
USF1-201ENST00000368019 OR10H2O60403 315 aa10.31□□□□□ -0.76
USF1-201ENST00000368019 SCGNO76038 276 aa10.31□□□□□ -0.76
USF1-201ENST00000368019 RAB3DO95716 219 aa10.31□□□□□ -0.76
USF1-201ENST00000368019 IL2RAP01589 272 aa10.31□□□□□ -0.76
USF1-201ENST00000368019 OR4E1P0C645 316 aa10.31□□□□□ -0.76
USF1-201ENST00000368019 FOLR1P15328 257 aa10.31□□□□□ -0.76
USF1-201ENST00000368019 RAB6AP20340 208 aa10.31□□□□□ -0.76
USF1-201ENST00000368019 CNR1P21554 472 aa10.31□□□□□ -0.76
USF1-201ENST00000368019 POU3F4P49335 361 aa10.31□□□□□ -0.76
USF1-201ENST00000368019 ERVK-25P63136 954 aa10.31□□□□□ -0.76
USF1-201ENST00000368019 SORDQ00796 357 aa10.31□□□□□ -0.76
USF1-201ENST00000368019 ID2Q02363 134 aa10.31□□□□□ -0.76
USF1-201ENST00000368019 ELOA3BQ3SY89 546 aa10.31□□□□□ -0.76
USF1-201ENST00000368019 ALG10Q5BKT4 473 aa10.31□□□□□ -0.76
USF1-201ENST00000368019 LY6G6FQ5SQ64 297 aa10.31□□□□□ -0.76
USF1-201ENST00000368019 PDSS1Q5T2R2 415 aa10.31□□□□□ -0.76
USF1-201ENST00000368019 C11orf87Q6NUJ2 197 aa10.31□□□□□ -0.76
USF1-201ENST00000368019 FAAP20Q6NZ36 180 aa10.31□□□□□ -0.76
USF1-201ENST00000368019 C11orf88Q6PI97 169 aa10.31□□□□□ -0.76
USF1-201ENST00000368019 LRFN4Q6PJG9 635 aa10.31□□□□□ -0.76
USF1-201ENST00000368019 ACOT7LQ6ZUV0 252 aa10.31□□□□□ -0.76
USF1-201ENST00000368019 PGAP1Q75T13 922 aa10.31□□□□□ -0.76
USF1-201ENST00000368019 NDUFAF7Q7L592 441 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms