RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 ATP5SQ99766 215 aa7.9□□□□□ -1.14
SYNE1-206ENST00000367253 RIMS4Q9H426 269 aaPredicted RBP7.9□□□□□ -1.14
SYNE1-206ENST00000367253 B3GALT5Q9Y2C3 310 aa7.9□□□□□ -1.14
SYNE1-206ENST00000367253 AMMECR1Q9Y4X0 333 aaPredicted RBP7.9□□□□□ -1.14
SYNE1-206ENST00000367253 SCN9AQ15858 1988 aa7.9□□□□□ -1.14
SYNE1-206ENST00000367253 MYH4Q9Y623 1939 aa7.9□□□□□ -1.14
SYNE1-206ENST00000367253 A1L4Q6 167 aa7.9□□□□□ -1.14
SYNE1-206ENST00000367253 OR2C1O95371 312 aa7.9□□□□□ -1.14
SYNE1-206ENST00000367253 FURINP09958 794 aa7.9□□□□□ -1.14
SYNE1-206ENST00000367253 PRPH2P23942 346 aa7.9□□□□□ -1.14
SYNE1-206ENST00000367253 SSTR4P31391 388 aa7.9□□□□□ -1.14
SYNE1-206ENST00000367253 SULT1A1P50225 295 aa7.9□□□□□ -1.14
SYNE1-206ENST00000367253 RIPPLY3P57055 190 aa7.9□□□□□ -1.14
SYNE1-206ENST00000367253 PAFAH1B2P68402 229 aa7.9□□□□□ -1.14
SYNE1-206ENST00000367253 MRPS34P82930 218 aaKnown RBP7.9□□□□□ -1.14
SYNE1-206ENST00000367253 TPBGQ13641 420 aa7.9□□□□□ -1.14
SYNE1-206ENST00000367253 MSMO1Q15800 293 aa7.9□□□□□ -1.14
SYNE1-206ENST00000367253 ZNF791Q3KP31 576 aaPredicted RBP7.9□□□□□ -1.14
SYNE1-206ENST00000367253 PLK5Q496M5 336 aa7.9□□□□□ -1.14
SYNE1-206ENST00000367253 TMEM52BQ4KMG9 183 aa7.9□□□□□ -1.14
SYNE1-206ENST00000367253 UNQ6494/PRO21346Q6UXR6 183 aa7.9□□□□□ -1.14
SYNE1-206ENST00000367253 CCDC190Q86UF4 302 aa7.9□□□□□ -1.14
SYNE1-206ENST00000367253 SPICQ8N5J4 248 aa7.9□□□□□ -1.14
SYNE1-206ENST00000367253 DNAJC5GQ8N7S2 189 aa7.9□□□□□ -1.14
SYNE1-206ENST00000367253 C15orf54Q8N8G6 183 aa7.9□□□□□ -1.14
SYNE1-206ENST00000367253 B3GNT7Q8NFL0 401 aa7.9□□□□□ -1.14
SYNE1-206ENST00000367253 ARSGQ96EG1 525 aa7.9□□□□□ -1.14
SYNE1-206ENST00000367253 PIGMQ9H3S5 423 aa7.9□□□□□ -1.14
SYNE1-206ENST00000367253 DMAC2Q9NW81 257 aa7.9□□□□□ -1.14
SYNE1-206ENST00000367253 FAM206AQ9NX38 181 aa7.9□□□□□ -1.14
SYNE1-206ENST00000367253 OR14J1Q9UGF5 321 aa7.9□□□□□ -1.14
SYNE1-206ENST00000367253 SSUH2Q9Y2M2 353 aa7.9□□□□□ -1.14
SYNE1-206ENST00000367253 ZNF256Q9Y2P7 627 aaPredicted RBP7.9□□□□□ -1.14
SYNE1-206ENST00000367253 OR6C76A6NM76 312 aa7.9□□□□□ -1.14
SYNE1-206ENST00000367253 PPP5D1E7EU14 171 aa7.9□□□□□ -1.14
SYNE1-206ENST00000367253 HLA-HP01893 362 aa7.9□□□□□ -1.14
SYNE1-206ENST00000367253 ALDOCP09972 364 aaKnown RBP7.9□□□□□ -1.14
SYNE1-206ENST00000367253 EDDM3BP56851 147 aa7.9□□□□□ -1.14
SYNE1-206ENST00000367253 KRTDAPP60985 99 aa7.9□□□□□ -1.14
SYNE1-206ENST00000367253 PIN1Q13526 163 aaPredicted RBP7.9□□□□□ -1.14
SYNE1-206ENST00000367253 AWAT2Q6E213 333 aa7.9□□□□□ -1.14
SYNE1-206ENST00000367253 LCN8Q6JVE9 175 aa7.9□□□□□ -1.14
SYNE1-206ENST00000367253 BHLHE23Q8NDY6 225 aa7.9□□□□□ -1.14
SYNE1-206ENST00000367253 MSLNLQ96KJ4 702 aa7.9□□□□□ -1.14
SYNE1-206ENST00000367253 BOCQ9BWV1 1114 aa7.9□□□□□ -1.14
SYNE1-206ENST00000367253 DIMT1Q9UNQ2 313 aaKnown RBP7.9□□□□□ -1.14
SYNE1-206ENST00000367253 CEPT1Q9Y6K0 416 aa7.9□□□□□ -1.14
SYNE1-206ENST00000367253 NRXN2Q9P2S2 1712 aa7.9□□□□□ -1.15
SYNE1-206ENST00000367253 COL4A1P02462 1669 aa7.9□□□□□ -1.15
SYNE1-206ENST00000367253 GAGE10A6NGK3 116 aa7.9□□□□□ -1.15
SYNE1-206ENST00000367253 K7ESM1 405 aa7.9□□□□□ -1.15
SYNE1-206ENST00000367253 EIF3GO75821 320 aaKnown RBP eCLIP7.9□□□□□ -1.15
SYNE1-206ENST00000367253 GPR75O95800 540 aa7.9□□□□□ -1.15
SYNE1-206ENST00000367253 METTL15P1P0C7V9 234 aa7.9□□□□□ -1.15
SYNE1-206ENST00000367253 NFYBP25208 207 aa7.9□□□□□ -1.15
SYNE1-206ENST00000367253 IMPA1P29218 277 aa7.9□□□□□ -1.15
SYNE1-206ENST00000367253 NPBWR1P48145 328 aa7.9□□□□□ -1.15
SYNE1-206ENST00000367253 JAM2P57087 298 aa7.9□□□□□ -1.15
SYNE1-206ENST00000367253 CLN3Q13286 438 aa7.9□□□□□ -1.15
SYNE1-206ENST00000367253 BRICD5Q6PL45 260 aa7.9□□□□□ -1.15
SYNE1-206ENST00000367253 REC114Q7Z4M0 266 aa7.9□□□□□ -1.15
SYNE1-206ENST00000367253 NRARPQ7Z6K4 114 aa7.9□□□□□ -1.15
SYNE1-206ENST00000367253 TMEM173Q86WV6 379 aaPredicted RBP7.9□□□□□ -1.15
SYNE1-206ENST00000367253 OR6V1Q8N148 313 aa7.9□□□□□ -1.15
SYNE1-206ENST00000367253 PARP16Q8N5Y8 322 aa7.9□□□□□ -1.15
SYNE1-206ENST00000367253 SIGLECL1Q8N7X8 197 aa7.9□□□□□ -1.15
SYNE1-206ENST00000367253 OR2G2Q8NGZ5 317 aa7.9□□□□□ -1.15
SYNE1-206ENST00000367253 WDR20Q8TBZ3 569 aa7.9□□□□□ -1.15
SYNE1-206ENST00000367253 FYTTD1Q96QD9 318 aaKnown RBP7.9□□□□□ -1.15
SYNE1-206ENST00000367253 NPY6RQ99463 290 aa7.9□□□□□ -1.15
SYNE1-206ENST00000367253 FEVQ99581 238 aa7.9□□□□□ -1.15
SYNE1-206ENST00000367253 RTL8AQ9BWD3 113 aa7.9□□□□□ -1.15
SYNE1-206ENST00000367253 PRDM6Q9NQX0 595 aa7.9□□□□□ -1.15
SYNE1-206ENST00000367253 CORINQ9Y5Q5 1042 aa7.9□□□□□ -1.15
SYNE1-206ENST00000367253 ZNF785A8K8V0 405 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 ANHXE9PGG2 379 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 HYAL3O43820 417 aaPredicted RBP7.89□□□□□ -1.15
SYNE1-206ENST00000367253 HLA-DOBP13765 273 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 AKR1C3P42330 323 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 SKP2Q13309 424 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 ELAVL1Q15717 326 aaKnown RBP7.89□□□□□ -1.15
SYNE1-206ENST00000367253 LTB4RQ15722 352 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 C6orf136Q5SQH8 315 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 KDM4DQ6B0I6 523 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 LRP11Q86VZ4 500 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 SFTPA2Q8IWL1 248 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 SFTPA1Q8IWL2 248 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 ASB13Q8WXK3 278 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 MRGPRX1Q96LB2 322 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 ACPTQ9BZG2 426 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 YBX2Q9Y2T7 364 aaKnown RBP7.89□□□□□ -1.15
SYNE1-206ENST00000367253 AP4M1O00189 453 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 ARPC3O15145 178 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 LINC01565O15544 149 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 PTP4A3O75365 173 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 HLA-AP01891 365 aaKnown RBP7.89□□□□□ -1.15
SYNE1-206ENST00000367253 TNFSF8P32971 234 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 TRHRP34981 398 aaPredicted RBP7.89□□□□□ -1.15
SYNE1-206ENST00000367253 CKS1BP61024 79 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 H3F3AP84243 136 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms