RNA–Protein interactions for RNA: ENST00000366998.4

NEK2-201, Transcript of NIMA related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene NEK2, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-201ENST00000366998 LUZP2Q86TE4 346 aa13.21□□□□□ -0.3
NEK2-201ENST00000366998 DTX3Q8N9I9 347 aa13.21□□□□□ -0.3
NEK2-201ENST00000366998 DNAAF1Q8NEP3 725 aa13.21□□□□□ -0.3
NEK2-201ENST00000366998 GJC3Q8NFK1 279 aa13.21□□□□□ -0.3
NEK2-201ENST00000366998 OR4M1Q8NGD0 313 aa13.21□□□□□ -0.3
NEK2-201ENST00000366998 FNDC9Q8TBE3 224 aa13.21□□□□□ -0.3
NEK2-201ENST00000366998 LGALS14Q8TCE9 139 aa13.21□□□□□ -0.3
NEK2-201ENST00000366998 ASB5Q8WWX0 329 aa13.21□□□□□ -0.3
NEK2-201ENST00000366998 PNRC2Q9NPJ4 139 aaKnown RBP13.21□□□□□ -0.3
NEK2-201ENST00000366998 TNRC6AQ8NDV7 1962 aaKnown RBP13.2□□□□□ -0.3
NEK2-201ENST00000366998 TRAV17A0A0B4J275 112 aa13.2□□□□□ -0.3
NEK2-201ENST00000366998 MRPL33O75394 65 aaKnown RBP13.2□□□□□ -0.3
NEK2-201ENST00000366998 ISG15P05161 165 aa13.2□□□□□ -0.3
NEK2-201ENST00000366998 CX3CR1P49238 355 aa13.2□□□□□ -0.3
NEK2-201ENST00000366998 GRB2P62993 217 aaKnown RBP13.2□□□□□ -0.3
NEK2-201ENST00000366998 RHOUQ7L0Q8 258 aa13.2□□□□□ -0.3
NEK2-201ENST00000366998 ZNF283Q8N7M2 679 aa13.2□□□□□ -0.3
NEK2-201ENST00000366998 CPT1CQ8TCG5 803 aa13.2□□□□□ -0.3
NEK2-201ENST00000366998 TMEM45BQ96B21 275 aa13.2□□□□□ -0.3
NEK2-201ENST00000366998 MOB1AQ9H8S9 216 aa13.2□□□□□ -0.3
NEK2-201ENST00000366998 ZDHHC11Q9H8X9 412 aa13.2□□□□□ -0.3
NEK2-201ENST00000366998 CYSLTR2Q9NS75 346 aa13.2□□□□□ -0.3
NEK2-201ENST00000366998 CKLFQ9UBR5 152 aa13.2□□□□□ -0.3
NEK2-201ENST00000366998 CAMK2AQ9UQM7 478 aa13.2□□□□□ -0.3
NEK2-201ENST00000366998 IGKV3D-15A0A087WSY6 115 aa13.19□□□□□ -0.3
NEK2-201ENST00000366998 A0A1B0GVC2 190 aa13.19□□□□□ -0.3
NEK2-201ENST00000366998 A6NIN4 97 aa13.19□□□□□ -0.3
NEK2-201ENST00000366998 TTRP02766 147 aa13.19□□□□□ -0.3
NEK2-201ENST00000366998 ACSM4P0C7M7 580 aa13.19□□□□□ -0.3
NEK2-201ENST00000366998 SLC2A1P11166 492 aa13.19□□□□□ -0.3
NEK2-201ENST00000366998 ZNF24P17028 368 aa13.19□□□□□ -0.3
NEK2-201ENST00000366998 SPINK2P20155 84 aa13.19□□□□□ -0.3
NEK2-201ENST00000366998 NPR2P20594 1047 aa13.19□□□□□ -0.3
NEK2-201ENST00000366998 PTBP1P26599 531 aaKnown RBP eCLIP13.19□□□□□ -0.3
NEK2-201ENST00000366998 CLDN12P56749 244 aa13.19□□□□□ -0.3
NEK2-201ENST00000366998 ZNF121P58317 390 aaPredicted RBP13.19□□□□□ -0.3
NEK2-201ENST00000366998 GALK2Q01415 458 aa13.19□□□□□ -0.3
NEK2-201ENST00000366998 CEACAM16Q2WEN9 425 aa13.19□□□□□ -0.3
NEK2-201ENST00000366998 LINGO2Q7L985 606 aa13.19□□□□□ -0.3
NEK2-201ENST00000366998 MCEMP1Q8IX19 187 aa13.19□□□□□ -0.3
NEK2-201ENST00000366998 ELMOD2Q8IZ81 293 aa13.19□□□□□ -0.3
NEK2-201ENST00000366998 SOSTQ9BQB4 213 aa13.19□□□□□ -0.3
NEK2-201ENST00000366998 PPP1R3EQ9H7J1 279 aa13.19□□□□□ -0.3
NEK2-201ENST00000366998 CALHM2Q9HA72 323 aa13.19□□□□□ -0.3
NEK2-201ENST00000366998 TMEM38BQ9NVV0 291 aa13.19□□□□□ -0.3
NEK2-201ENST00000366998 SPRR3Q9UBC9 169 aa13.19□□□□□ -0.3
NEK2-201ENST00000366998 SPATA2Q9UM82 520 aa13.19□□□□□ -0.3
NEK2-201ENST00000366998 SLC5A6Q9Y289 635 aa13.19□□□□□ -0.3
NEK2-201ENST00000366998 AKAP13Q12802 2813 aa13.19□□□□□ -0.3
NEK2-201ENST00000366998 ARPC4-TTLL3A0A0A6YYG9 625 aa13.19□□□□□ -0.3
NEK2-201ENST00000366998 LINC00854A0A1B0GVQ3 168 aa13.19□□□□□ -0.3
NEK2-201ENST00000366998 A0A1W2PQ09 198 aa13.19□□□□□ -0.3
NEK2-201ENST00000366998 EFSO43281 561 aa13.19□□□□□ -0.3
NEK2-201ENST00000366998 IGHV3-9P01782 118 aa13.19□□□□□ -0.3
NEK2-201ENST00000366998 CSF3P09919 207 aa13.19□□□□□ -0.3
NEK2-201ENST00000366998 TAB1Q15750 504 aa13.19□□□□□ -0.3
NEK2-201ENST00000366998 FAM27BQ5VT28 67 aa13.19□□□□□ -0.3
NEK2-201ENST00000366998 COMMD2Q86X83 199 aa13.19□□□□□ -0.3
NEK2-201ENST00000366998 TUSC5Q8IXB3 177 aa13.19□□□□□ -0.3
NEK2-201ENST00000366998 Q8N402 240 aa13.19□□□□□ -0.3
NEK2-201ENST00000366998 SLCO5A1Q9H2Y9 848 aa13.19□□□□□ -0.3
NEK2-201ENST00000366998 LIN7BQ9HAP6 207 aa13.19□□□□□ -0.3
NEK2-201ENST00000366998 GPR35Q9HC97 309 aa13.19□□□□□ -0.3
NEK2-201ENST00000366998 TAS2R4Q9NYW5 299 aa13.19□□□□□ -0.3
NEK2-201ENST00000366998 NUFIP1Q9UHK0 495 aaKnown RBP13.19□□□□□ -0.3
NEK2-201ENST00000366998 A0A0G2JMP0 313 aa13.18□□□□□ -0.3
NEK2-201ENST00000366998 A0A0X1KG70 313 aa13.18□□□□□ -0.3
NEK2-201ENST00000366998 SYT7O43581 403 aa13.18□□□□□ -0.3
NEK2-201ENST00000366998 GFRA3O60609 400 aa13.18□□□□□ -0.3
NEK2-201ENST00000366998 LMX1BO60663 402 aa13.18□□□□□ -0.3
NEK2-201ENST00000366998 CEACAM4O75871 244 aa13.18□□□□□ -0.3
NEK2-201ENST00000366998 APOA1P02647 267 aa13.18□□□□□ -0.3
NEK2-201ENST00000366998 B4GALT1P15291 398 aa13.18□□□□□ -0.3
NEK2-201ENST00000366998 SCN1BQ07699 218 aa13.18□□□□□ -0.3
NEK2-201ENST00000366998 RIPPLY2Q5TAB7 128 aa13.18□□□□□ -0.3
NEK2-201ENST00000366998 TRIQKQ629K1 86 aa13.18□□□□□ -0.3
NEK2-201ENST00000366998 FAM57BQ71RH2 274 aa13.18□□□□□ -0.3
NEK2-201ENST00000366998 OR4M2Q8NGB6 313 aa13.18□□□□□ -0.3
NEK2-201ENST00000366998 FBXO17Q96EF6 278 aa13.18□□□□□ -0.3
NEK2-201ENST00000366998 WDYHV1Q96HA8 205 aa13.18□□□□□ -0.3
NEK2-201ENST00000366998 KCNJ15Q99712 375 aa13.18□□□□□ -0.3
NEK2-201ENST00000366998 FOXB1Q99853 325 aa13.18□□□□□ -0.3
NEK2-201ENST00000366998 DDX28Q9NUL7 540 aaKnown RBP13.18□□□□□ -0.3
NEK2-201ENST00000366998 FAIMQ9NVQ4 179 aa13.18□□□□□ -0.3
NEK2-201ENST00000366998 PARPBPQ9NWS1 579 aa13.18□□□□□ -0.3
NEK2-201ENST00000366998 PLEK2Q9NYT0 353 aa13.18□□□□□ -0.3
NEK2-201ENST00000366998 A0A1B0GVI7 797 aa13.17□□□□□ -0.3
NEK2-201ENST00000366998 PTTG1O95997 202 aa13.17□□□□□ -0.3
NEK2-201ENST00000366998 RNPS1Q15287 305 aaKnown RBP13.17□□□□□ -0.3
NEK2-201ENST00000366998 CCDC92Q53HC0 331 aaPredicted RBP13.17□□□□□ -0.3
NEK2-201ENST00000366998 UBE2NLQ5JXB2 153 aa13.17□□□□□ -0.3
NEK2-201ENST00000366998 ELFN2Q5R3F8 820 aa13.17□□□□□ -0.3
NEK2-201ENST00000366998 TSPO2Q5TGU0 170 aa13.17□□□□□ -0.3
NEK2-201ENST00000366998 OR8B12Q8NGG6 310 aa13.17□□□□□ -0.3
NEK2-201ENST00000366998 OR51E1Q8TCB6 317 aa13.17□□□□□ -0.3
NEK2-201ENST00000366998 SP140LQ9H930 580 aa13.17□□□□□ -0.3
NEK2-201ENST00000366998 TBC1D24Q9ULP9 559 aa13.17□□□□□ -0.3
NEK2-201ENST00000366998 FOXJ3Q9UPW0 622 aa13.17□□□□□ -0.3
NEK2-201ENST00000366998 URB1O60287 2271 aaKnown RBP13.17□□□□□ -0.3
NEK2-201ENST00000366998 F5H5K5 113 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms