RNA–Protein interactions for RNA: ENST00000364054.1

RNU6-1048P-201, Transcript of RNA, U6 small nuclear 1048, pseudogene, humanhuman

BASIC

Gene RNU6-1048P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1048P-201ENST00000364054 ZNF660Q6AZW8 331 aaPredicted RBP0.28□□□□□ -2.36
RNU6-1048P-201ENST00000364054 WDR59Q6PJI9 974 aa0.28□□□□□ -2.36
RNU6-1048P-201ENST00000364054 NKAIN4Q8IVV8 208 aa0.28□□□□□ -2.36
RNU6-1048P-201ENST00000364054 PDIK1LQ8N165 341 aa0.28□□□□□ -2.36
RNU6-1048P-201ENST00000364054 STK40Q8N2I9 435 aa0.28□□□□□ -2.36
RNU6-1048P-201ENST00000364054 SNX31Q8N9S9 440 aa0.28□□□□□ -2.36
RNU6-1048P-201ENST00000364054 MFSD9Q8NBP5 474 aa0.28□□□□□ -2.36
RNU6-1048P-201ENST00000364054 CCDC110Q8TBZ0 833 aa0.28□□□□□ -2.36
RNU6-1048P-201ENST00000364054 OSTF1Q92882 214 aa0.28□□□□□ -2.36
RNU6-1048P-201ENST00000364054 C20orf166-AS1Q96NR2 134 aa0.28□□□□□ -2.36
RNU6-1048P-201ENST00000364054 SLC38A2Q96QD8 506 aa0.28□□□□□ -2.36
RNU6-1048P-201ENST00000364054 CNN2Q99439 309 aaKnown RBP0.28□□□□□ -2.36
RNU6-1048P-201ENST00000364054 COPS8Q99627 209 aa0.28□□□□□ -2.36
RNU6-1048P-201ENST00000364054 HIGD2AQ9BW72 106 aa0.28□□□□□ -2.36
RNU6-1048P-201ENST00000364054 HSD3B7Q9H2F3 369 aa0.28□□□□□ -2.36
RNU6-1048P-201ENST00000364054 RWDD1Q9H446 243 aaPredicted RBP0.28□□□□□ -2.36
RNU6-1048P-201ENST00000364054 PDP1Q9P0J1 537 aaPredicted RBP0.28□□□□□ -2.36
RNU6-1048P-201ENST00000364054 RP1L1Q8IWN7 2480 aaPredicted RBP0.28□□□□□ -2.36
RNU6-1048P-201ENST00000364054 LAMB2P55268 1798 aa0.27□□□□□ -2.37
RNU6-1048P-201ENST00000364054 TRGV4A0A0C4DH28 118 aa0.27□□□□□ -2.37
RNU6-1048P-201ENST00000364054 GABRR3A8MPY1 467 aa0.27□□□□□ -2.37
RNU6-1048P-201ENST00000364054 HAS3O00219 553 aa0.27□□□□□ -2.37
RNU6-1048P-201ENST00000364054 CDC7O00311 574 aa0.27□□□□□ -2.37
RNU6-1048P-201ENST00000364054 DPM1O60762 260 aa0.27□□□□□ -2.37
RNU6-1048P-201ENST00000364054 RDH16O75452 317 aa0.27□□□□□ -2.37
RNU6-1048P-201ENST00000364054 SLC35G6P0C7Q6 338 aa0.27□□□□□ -2.37
RNU6-1048P-201ENST00000364054 P0DMU3 169 aa0.27□□□□□ -2.37
RNU6-1048P-201ENST00000364054 FAM231AP0DMU4 169 aa0.27□□□□□ -2.37
RNU6-1048P-201ENST00000364054 FAM231CP0DMU5 169 aa0.27□□□□□ -2.37
RNU6-1048P-201ENST00000364054 IFNA8P32881 189 aa0.27□□□□□ -2.37
RNU6-1048P-201ENST00000364054 RBM34P42696 430 aaKnown RBP0.27□□□□□ -2.37
RNU6-1048P-201ENST00000364054 RGS4P49798 205 aa0.27□□□□□ -2.37
RNU6-1048P-201ENST00000364054 SSR4P51571 173 aa0.27□□□□□ -2.37
RNU6-1048P-201ENST00000364054 RPL23P62829 140 aaKnown RBP0.27□□□□□ -2.37
RNU6-1048P-201ENST00000364054 SIGLEC14Q08ET2 396 aa0.27□□□□□ -2.37
RNU6-1048P-201ENST00000364054 SLC36A3Q495N2 470 aa0.27□□□□□ -2.37
RNU6-1048P-201ENST00000364054 N4BP2L1Q5TBK1 243 aaPredicted RBP0.27□□□□□ -2.37
RNU6-1048P-201ENST00000364054 KCTD16Q68DU8 428 aa0.27□□□□□ -2.37
RNU6-1048P-201ENST00000364054 OR4F3Q6IEY1 312 aa0.27□□□□□ -2.37
RNU6-1048P-201ENST00000364054 ZNF322Q6U7Q0 402 aaPredicted RBP0.27□□□□□ -2.37
RNU6-1048P-201ENST00000364054 MDP1Q86V88 176 aa0.27□□□□□ -2.37
RNU6-1048P-201ENST00000364054 TMEM123Q8N131 208 aa0.27□□□□□ -2.37
RNU6-1048P-201ENST00000364054 EID2Q8N6I1 236 aa0.27□□□□□ -2.37
RNU6-1048P-201ENST00000364054 OR4K13Q8NH42 304 aa0.27□□□□□ -2.37
RNU6-1048P-201ENST00000364054 OR52N1Q8NH53 320 aa0.27□□□□□ -2.37
RNU6-1048P-201ENST00000364054 MUC7Q8TAX7 377 aa0.27□□□□□ -2.37
RNU6-1048P-201ENST00000364054 RSPH1Q8WYR4 309 aa0.27□□□□□ -2.37
RNU6-1048P-201ENST00000364054 KRT23Q9C075 422 aa0.27□□□□□ -2.37
RNU6-1048P-201ENST00000364054 C1orf21Q9H246 121 aa0.27□□□□□ -2.37
RNU6-1048P-201ENST00000364054 LINC00574Q9H8X3 128 aa0.27□□□□□ -2.37
RNU6-1048P-201ENST00000364054 NMRAL1Q9HBL8 299 aa0.27□□□□□ -2.37
RNU6-1048P-201ENST00000364054 SDAD1Q9NVU7 687 aaKnown RBP eCLIP0.27□□□□□ -2.37
RNU6-1048P-201ENST00000364054 NINJ2Q9NZG7 142 aa0.27□□□□□ -2.37
RNU6-1048P-201ENST00000364054 NOL7Q9UMY1 257 aaKnown RBP0.27□□□□□ -2.37
RNU6-1048P-201ENST00000364054 SSH2Q76I76 1423 aa0.27□□□□□ -2.37
RNU6-1048P-201ENST00000364054 A0A1B0GVL5 298 aa0.26□□□□□ -2.37
RNU6-1048P-201ENST00000364054 MYBPHLA2RUH7 354 aa0.26□□□□□ -2.37
RNU6-1048P-201ENST00000364054 RGSL1A5PLK6 1076 aa0.26□□□□□ -2.37
RNU6-1048P-201ENST00000364054 PCP4L1A6NKN8 68 aa0.26□□□□□ -2.37
RNU6-1048P-201ENST00000364054 NDUFC2-KCTD14E9PQ53 114 aa0.26□□□□□ -2.37
RNU6-1048P-201ENST00000364054 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP0.26□□□□□ -2.37
RNU6-1048P-201ENST00000364054 TNFRSF11BO00300 401 aa0.26□□□□□ -2.37
RNU6-1048P-201ENST00000364054 SLC31A1O15431 190 aa0.26□□□□□ -2.37
RNU6-1048P-201ENST00000364054 EEDO75530 441 aaKnown RBP0.26□□□□□ -2.37
RNU6-1048P-201ENST00000364054 PTBP3O95758 552 aaKnown RBP0.26□□□□□ -2.37
RNU6-1048P-201ENST00000364054 AK1P00568 194 aa0.26□□□□□ -2.37
RNU6-1048P-201ENST00000364054 ATP6V1C1P21283 382 aa0.26□□□□□ -2.37
RNU6-1048P-201ENST00000364054 CA8P35219 290 aa0.26□□□□□ -2.37
RNU6-1048P-201ENST00000364054 PCK1P35558 622 aa0.26□□□□□ -2.37
RNU6-1048P-201ENST00000364054 RABIFP47224 123 aa0.26□□□□□ -2.37
RNU6-1048P-201ENST00000364054 TGM4P49221 684 aa0.26□□□□□ -2.37
RNU6-1048P-201ENST00000364054 TMED10P49755 219 aaKnown RBP0.26□□□□□ -2.37
RNU6-1048P-201ENST00000364054 PRMT2P55345 433 aa0.26□□□□□ -2.37
RNU6-1048P-201ENST00000364054 YBEYP58557 167 aaPredicted RBP0.26□□□□□ -2.37
RNU6-1048P-201ENST00000364054 TAS2R43P59537 309 aa0.26□□□□□ -2.37
RNU6-1048P-201ENST00000364054 YWHAGP61981 247 aaKnown RBP eCLIP0.26□□□□□ -2.37
RNU6-1048P-201ENST00000364054 PNOCQ13519 176 aa0.26□□□□□ -2.37
RNU6-1048P-201ENST00000364054 DGCR6Q14129 220 aa0.26□□□□□ -2.37
RNU6-1048P-201ENST00000364054 SLC9A3R2Q15599 337 aa0.26□□□□□ -2.37
RNU6-1048P-201ENST00000364054 IMMTQ16891 758 aaKnown RBP0.26□□□□□ -2.37
RNU6-1048P-201ENST00000364054 CCDC92Q53HC0 331 aaPredicted RBP0.26□□□□□ -2.37
RNU6-1048P-201ENST00000364054 OR2A1Q8NGT9 310 aa0.26□□□□□ -2.37
RNU6-1048P-201ENST00000364054 BLNKQ8WV28 456 aa0.26□□□□□ -2.37
RNU6-1048P-201ENST00000364054 RLN3Q8WXF3 142 aa0.26□□□□□ -2.37
RNU6-1048P-201ENST00000364054 PLEKHA8Q96JA3 519 aa0.26□□□□□ -2.37
RNU6-1048P-201ENST00000364054 TMEM27Q9HBJ8 222 aa0.26□□□□□ -2.37
RNU6-1048P-201ENST00000364054 ING4Q9UNL4 249 aa0.26□□□□□ -2.37
RNU6-1048P-201ENST00000364054 PIGLQ9Y2B2 252 aa0.26□□□□□ -2.37
RNU6-1048P-201ENST00000364054 SLC22A7Q9Y694 548 aa0.26□□□□□ -2.37
RNU6-1048P-201ENST00000364054 MDN1Q9NU22 5596 aa0.26□□□□□ -2.37
RNU6-1048P-201ENST00000364054 ZNF816-ZNF321PA0A0X1KG74 233 aa0.25□□□□□ -2.37
RNU6-1048P-201ENST00000364054 C19orf71A6NCJ1 209 aa0.25□□□□□ -2.37
RNU6-1048P-201ENST00000364054 KRT87PA6NCN2 255 aa0.25□□□□□ -2.37
RNU6-1048P-201ENST00000364054 METTL21EPA6NDL7 271 aa0.25□□□□□ -2.37
RNU6-1048P-201ENST00000364054 TRIM64A6NGJ6 449 aa0.25□□□□□ -2.37
RNU6-1048P-201ENST00000364054 TRIM64BA6NI03 449 aa0.25□□□□□ -2.37
RNU6-1048P-201ENST00000364054 L7N2F9 121 aa0.25□□□□□ -2.37
RNU6-1048P-201ENST00000364054 GOSR2O14653 212 aa0.25□□□□□ -2.37
RNU6-1048P-201ENST00000364054 PRRG1O14668 218 aa0.25□□□□□ -2.37
RNU6-1048P-201ENST00000364054 ARPC3O15145 178 aa0.25□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms